RNA–Protein interactions for RNA: ENST00000427025.6

NHSL1-204, Transcript of NHS like 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NHSL1, Length 7,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHSL1-204ENST00000427025 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
NHSL1-204ENST00000427025 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
NHSL1-204ENST00000427025 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
NHSL1-204ENST00000427025 PELP1Q8IZL8 1130 aaKnown RBP20.23■□□□□ 0.83
NHSL1-204ENST00000427025 FAM9AQ8IZU1 332 aaPredicted RBP20.16■□□□□ 0.82
NHSL1-204ENST00000427025 APLP2Q06481 763 aa19.92■□□□□ 0.78
NHSL1-204ENST00000427025 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
NHSL1-204ENST00000427025 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
NHSL1-204ENST00000427025 ERICH6Q7L0X2 663 aa19.76■□□□□ 0.75
NHSL1-204ENST00000427025 TTBK1Q5TCY1 1321 aaPredicted RBP19.7■□□□□ 0.74
NHSL1-204ENST00000427025 ATP1B4Q9UN42 357 aaPredicted RBP19.66■□□□□ 0.74
NHSL1-204ENST00000427025 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
NHSL1-204ENST00000427025 CENPBP07199 599 aaPredicted RBP19.47■□□□□ 0.71
NHSL1-204ENST00000427025 MYT1Q01538 1121 aa19.42■□□□□ 0.7
NHSL1-204ENST00000427025 MYT1LQ9UL68 1186 aa19.42■□□□□ 0.7
NHSL1-204ENST00000427025 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
NHSL1-204ENST00000427025 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
NHSL1-204ENST00000427025 YTHDC1Q96MU7 727 aaKnown RBP19.29■□□□□ 0.68
NHSL1-204ENST00000427025 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
NHSL1-204ENST00000427025 ZEB1P37275 1124 aaPredicted RBP19.15■□□□□ 0.66
NHSL1-204ENST00000427025 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
NHSL1-204ENST00000427025 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
NHSL1-204ENST00000427025 DAXXQ9UER7 740 aaPredicted RBP18.93■□□□□ 0.62
NHSL1-204ENST00000427025 NEFLP07196 543 aa18.9■□□□□ 0.62
NHSL1-204ENST00000427025 HRCP23327 699 aa18.86■□□□□ 0.61
NHSL1-204ENST00000427025 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
NHSL1-204ENST00000427025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
NHSL1-204ENST00000427025 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
NHSL1-204ENST00000427025 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
NHSL1-204ENST00000427025 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
NHSL1-204ENST00000427025 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
NHSL1-204ENST00000427025 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
NHSL1-204ENST00000427025 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
NHSL1-204ENST00000427025 CLSPNQ9HAW4 1339 aa18.46■□□□□ 0.55
NHSL1-204ENST00000427025 ITGAEP38570 1179 aa18.44■□□□□ 0.54
NHSL1-204ENST00000427025 BCL11AQ9H165 835 aa18.43■□□□□ 0.54
NHSL1-204ENST00000427025 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
NHSL1-204ENST00000427025 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
NHSL1-204ENST00000427025 BCANQ96GW7 911 aa18.36■□□□□ 0.53
NHSL1-204ENST00000427025 GTF3C3Q9Y5Q9 886 aa18.32■□□□□ 0.52
NHSL1-204ENST00000427025 DIEXFQ68CQ4 756 aaKnown RBP18.3■□□□□ 0.52
NHSL1-204ENST00000427025 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
NHSL1-204ENST00000427025 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
NHSL1-204ENST00000427025 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
NHSL1-204ENST00000427025 A0A0G2JS52 829 aa17.95■□□□□ 0.46
NHSL1-204ENST00000427025 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
NHSL1-204ENST00000427025 NEFMP07197 916 aa17.86■□□□□ 0.45
NHSL1-204ENST00000427025 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
NHSL1-204ENST00000427025 CANXP27824 592 aaKnown RBP17.85■□□□□ 0.45
NHSL1-204ENST00000427025 FBLN2P98095 1184 aa17.85■□□□□ 0.45
NHSL1-204ENST00000427025 TRIM52Q96A61 297 aa17.83■□□□□ 0.45
NHSL1-204ENST00000427025 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
NHSL1-204ENST00000427025 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
NHSL1-204ENST00000427025 ZNF326Q5BKZ1 582 aaKnown RBP17.81■□□□□ 0.44
NHSL1-204ENST00000427025 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.43
NHSL1-204ENST00000427025 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
NHSL1-204ENST00000427025 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
NHSL1-204ENST00000427025 STAG3Q9UJ98 1225 aa17.66■□□□□ 0.42
NHSL1-204ENST00000427025 CDK11BP21127 795 aaKnown RBP17.66■□□□□ 0.42
NHSL1-204ENST00000427025 TULP1O00294 542 aaPredicted RBP17.66■□□□□ 0.42
NHSL1-204ENST00000427025 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
NHSL1-204ENST00000427025 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
NHSL1-204ENST00000427025 ANP32CO43423 234 aa17.57■□□□□ 0.4
NHSL1-204ENST00000427025 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
NHSL1-204ENST00000427025 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.39
NHSL1-204ENST00000427025 FKBP8Q14318 412 aa17.52■□□□□ 0.39
NHSL1-204ENST00000427025 NBR1Q14596 966 aa17.51■□□□□ 0.39
NHSL1-204ENST00000427025 ZBTB7CA1YPR0 619 aa17.5■□□□□ 0.39
NHSL1-204ENST00000427025 CHGAP10645 457 aaKnown RBP17.5■□□□□ 0.39
NHSL1-204ENST00000427025 HSP90AA1P07900 732 aaKnown RBP17.46■□□□□ 0.39
NHSL1-204ENST00000427025 ARID3CA6NKF2 412 aa17.46■□□□□ 0.39
NHSL1-204ENST00000427025 ANP32BQ92688 251 aaKnown RBP17.39■□□□□ 0.37
NHSL1-204ENST00000427025 ARXQ96QS3 562 aa17.36■□□□□ 0.37
NHSL1-204ENST00000427025 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
NHSL1-204ENST00000427025 C14orf37Q86TY3 774 aa17.34■□□□□ 0.37
NHSL1-204ENST00000427025 ZNF777Q9ULD5 760 aaPredicted RBP17.32■□□□□ 0.36
NHSL1-204ENST00000427025 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
NHSL1-204ENST00000427025 GLIPR1L2Q4G1C9 344 aa17.3■□□□□ 0.36
NHSL1-204ENST00000427025 NPHP1O15259 732 aa17.29■□□□□ 0.36
NHSL1-204ENST00000427025 NPM1P06748 294 aaKnown RBP eCLIP17.25■□□□□ 0.35
NHSL1-204ENST00000427025 IRX6P78412 446 aaPredicted RBP17.19■□□□□ 0.34
NHSL1-204ENST00000427025 HNRNPUQ00839 825 aaKnown RBP eCLIP17.17■□□□□ 0.34
NHSL1-204ENST00000427025 MIER1Q8N108 512 aa17.14■□□□□ 0.33
NHSL1-204ENST00000427025 ANP32EQ9BTT0 268 aa17.13■□□□□ 0.33
NHSL1-204ENST00000427025 DDX10Q13206 875 aaKnown RBP17.13■□□□□ 0.33
NHSL1-204ENST00000427025 TAOK2Q9UL54 1235 aa17.12■□□□□ 0.33
NHSL1-204ENST00000427025 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
NHSL1-204ENST00000427025 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
NHSL1-204ENST00000427025 CLSTN1O94985 981 aa17.1■□□□□ 0.33
NHSL1-204ENST00000427025 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
NHSL1-204ENST00000427025 UPF2Q9HAU5 1272 aaKnown RBP17.09■□□□□ 0.33
NHSL1-204ENST00000427025 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
NHSL1-204ENST00000427025 SALL2Q9Y467 1007 aaPredicted RBP17.09■□□□□ 0.33
NHSL1-204ENST00000427025 CCDC136Q96JN2 1154 aa17.04■□□□□ 0.32
NHSL1-204ENST00000427025 PRM3Q9NNZ6 103 aa17.03■□□□□ 0.32
NHSL1-204ENST00000427025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.322e-7■■□□□ 13.7
NHSL1-204ENST00000427025 ARID4BQ4LE39 1312 aaPredicted RBP17.02■□□□□ 0.31
NHSL1-204ENST00000427025 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
NHSL1-204ENST00000427025 DCAF1Q9Y4B6 1507 aa16.99■□□□□ 0.31
NHSL1-204ENST00000427025 LMOD2Q6P5Q4 547 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms