RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
FANCA-202ENST00000389301 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
FANCA-202ENST00000389301 PELP1Q8IZL8 1130 aaKnown RBP20.09■□□□□ 0.81
FANCA-202ENST00000389301 EHMT2Q96KQ7 1210 aa19.85■□□□□ 0.77
FANCA-202ENST00000389301 SHROOM4Q9ULL8 1493 aa19.84■□□□□ 0.77
FANCA-202ENST00000389301 NISCHQ9Y2I1 1504 aa19.59■□□□□ 0.73
FANCA-202ENST00000389301 PCGF6Q9BYE7 350 aa19.55■□□□□ 0.72
FANCA-202ENST00000389301 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
FANCA-202ENST00000389301 APLP2Q06481 763 aa19.37■□□□□ 0.69
FANCA-202ENST00000389301 ERICH6Q7L0X2 663 aa19.35■□□□□ 0.69
FANCA-202ENST00000389301 TTBK1Q5TCY1 1321 aaPredicted RBP19.27■□□□□ 0.68
FANCA-202ENST00000389301 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
FANCA-202ENST00000389301 MYT1Q01538 1121 aa19.24■□□□□ 0.67
FANCA-202ENST00000389301 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
FANCA-202ENST00000389301 CCER1Q8TC90 406 aaPredicted RBP19.15■□□□□ 0.66
FANCA-202ENST00000389301 YTHDC1Q96MU7 727 aaKnown RBP18.97■□□□□ 0.63
FANCA-202ENST00000389301 NEFLP07196 543 aa18.86■□□□□ 0.61
FANCA-202ENST00000389301 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
FANCA-202ENST00000389301 TRIM41Q8WV44 630 aa18.78■□□□□ 0.6
FANCA-202ENST00000389301 HRCP23327 699 aa18.69■□□□□ 0.58
FANCA-202ENST00000389301 TRIM26Q12899 539 aaPredicted RBP18.57■□□□□ 0.56
FANCA-202ENST00000389301 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
FANCA-202ENST00000389301 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
FANCA-202ENST00000389301 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
FANCA-202ENST00000389301 DAXXQ9UER7 740 aaPredicted RBP18.33■□□□□ 0.52
FANCA-202ENST00000389301 LOC105371045A0A1W2PR82 267 aa18.19■□□□□ 0.5
FANCA-202ENST00000389301 DIEXFQ68CQ4 756 aaKnown RBP18.13■□□□□ 0.49
FANCA-202ENST00000389301 ITGAEP38570 1179 aa18.12■□□□□ 0.49
FANCA-202ENST00000389301 POLR3GLQ9BT43 218 aa18.1■□□□□ 0.49
FANCA-202ENST00000389301 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
FANCA-202ENST00000389301 RTL5Q5HYW3 569 aaPredicted RBP18.09■□□□□ 0.49
FANCA-202ENST00000389301 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
FANCA-202ENST00000389301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
FANCA-202ENST00000389301 GTF3C3Q9Y5Q9 886 aa18■□□□□ 0.47
FANCA-202ENST00000389301 CNGB1Q14028 1251 aaPredicted RBP18■□□□□ 0.47
FANCA-202ENST00000389301 ZNF316A6NFI3 1004 aaPredicted RBP17.94■□□□□ 0.46
FANCA-202ENST00000389301 BCANQ96GW7 911 aa17.89■□□□□ 0.45
FANCA-202ENST00000389301 CLSPNQ9HAW4 1339 aa17.82■□□□□ 0.44
FANCA-202ENST00000389301 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
FANCA-202ENST00000389301 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
FANCA-202ENST00000389301 MYT1LQ9UL68 1186 aa17.67■□□□□ 0.42
FANCA-202ENST00000389301 NEUROD1Q13562 356 aa17.6■□□□□ 0.41
FANCA-202ENST00000389301 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
FANCA-202ENST00000389301 ANP32CO43423 234 aa17.58■□□□□ 0.41
FANCA-202ENST00000389301 FAM50AQ14320 339 aaKnown RBP17.57■□□□□ 0.4
FANCA-202ENST00000389301 TRIM52Q96A61 297 aa17.48■□□□□ 0.39
FANCA-202ENST00000389301 ANP32AP39687 249 aaKnown RBP17.43■□□□□ 0.38
FANCA-202ENST00000389301 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
FANCA-202ENST00000389301 ZNF326Q5BKZ1 582 aaKnown RBP17.35■□□□□ 0.37
FANCA-202ENST00000389301 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
FANCA-202ENST00000389301 FKBP8Q14318 412 aa17.32■□□□□ 0.36
FANCA-202ENST00000389301 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
FANCA-202ENST00000389301 CANXP27824 592 aaKnown RBP17.28■□□□□ 0.36
FANCA-202ENST00000389301 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
FANCA-202ENST00000389301 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
FANCA-202ENST00000389301 NBR1Q14596 966 aa17.14■□□□□ 0.33
FANCA-202ENST00000389301 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
FANCA-202ENST00000389301 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
FANCA-202ENST00000389301 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
FANCA-202ENST00000389301 DDX10Q13206 875 aaKnown RBP17.03■□□□□ 0.32
FANCA-202ENST00000389301 DCAF1Q9Y4B6 1507 aa17.02■□□□□ 0.32
FANCA-202ENST00000389301 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
FANCA-202ENST00000389301 HSP90AA1P07900 732 aaKnown RBP17■□□□□ 0.31
FANCA-202ENST00000389301 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
FANCA-202ENST00000389301 NEFMP07197 916 aa16.98■□□□□ 0.31
FANCA-202ENST00000389301 CCDC136Q96JN2 1154 aa16.97■□□□□ 0.31
FANCA-202ENST00000389301 UPF2Q9HAU5 1272 aaKnown RBP16.97■□□□□ 0.31
FANCA-202ENST00000389301 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
FANCA-202ENST00000389301 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
FANCA-202ENST00000389301 MIER1Q8N108 512 aa16.94■□□□□ 0.3
FANCA-202ENST00000389301 ARXQ96QS3 562 aa16.94■□□□□ 0.3
FANCA-202ENST00000389301 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
FANCA-202ENST00000389301 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
FANCA-202ENST00000389301 SALL2Q9Y467 1007 aaPredicted RBP16.9■□□□□ 0.3
FANCA-202ENST00000389301 ARID3CA6NKF2 412 aa16.87■□□□□ 0.29
FANCA-202ENST00000389301 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
FANCA-202ENST00000389301 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.291e-7■■■■□ 21.8
FANCA-202ENST00000389301 ZNF777Q9ULD5 760 aaPredicted RBP16.8■□□□□ 0.28
FANCA-202ENST00000389301 TMC1Q8TDI8 760 aa16.79■□□□□ 0.28
FANCA-202ENST00000389301 MRS2Q9HD23 443 aa16.79■□□□□ 0.28
FANCA-202ENST00000389301 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.77■□□□□ 0.28
FANCA-202ENST00000389301 FBLN2P98095 1184 aa16.74■□□□□ 0.27
FANCA-202ENST00000389301 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
FANCA-202ENST00000389301 DDRGK1Q96HY6 314 aa16.69■□□□□ 0.26
FANCA-202ENST00000389301 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.261e-5■■■■□ 24.6
FANCA-202ENST00000389301 ABCC9O60706 1549 aa16.65■□□□□ 0.26
FANCA-202ENST00000389301 TRIM44Q96DX7 344 aaPredicted RBP16.64■□□□□ 0.25
FANCA-202ENST00000389301 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
FANCA-202ENST00000389301 BECN1Q14457 450 aa16.62■□□□□ 0.25
FANCA-202ENST00000389301 CHIC2Q9UKJ5 165 aa16.61■□□□□ 0.25
FANCA-202ENST00000389301 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
FANCA-202ENST00000389301 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
FANCA-202ENST00000389301 PPM1GO15355 546 aaPredicted RBP16.54■□□□□ 0.24
FANCA-202ENST00000389301 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
FANCA-202ENST00000389301 LAS1LQ9Y4W2 734 aaKnown RBP16.53■□□□□ 0.24
FANCA-202ENST00000389301 EIF4G2P78344 907 aaKnown RBP eCLIP16.53■□□□□ 0.24
FANCA-202ENST00000389301 KDM2AQ9Y2K7 1162 aa16.53■□□□□ 0.24
FANCA-202ENST00000389301 ERICH6BQ5W0A0 696 aa16.53■□□□□ 0.24
FANCA-202ENST00000389301 NOP58Q9Y2X3 529 aaKnown RBP16.52■□□□□ 0.23
FANCA-202ENST00000389301 NAP1L5Q96NT1 182 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms