RNA–Protein interactions for RNA: ENST00000260926.9

SATB2-201, Transcript of SATB homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB2, Length 5,318 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-201ENST00000260926 DCAF8L2P0C7V8 631 aa23.59■■□□□ 1.37
SATB2-201ENST00000260926 NISCHQ9Y2I1 1504 aa23.33■■□□□ 1.33
SATB2-201ENST00000260926 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
SATB2-201ENST00000260926 SHROOM4Q9ULL8 1493 aa22.37■■□□□ 1.17
SATB2-201ENST00000260926 MYT1Q01538 1121 aa22.2■■□□□ 1.14
SATB2-201ENST00000260926 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
SATB2-201ENST00000260926 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
SATB2-201ENST00000260926 ERICH6Q7L0X2 663 aa21.36■■□□□ 1.01
SATB2-201ENST00000260926 FAM9AQ8IZU1 332 aaPredicted RBP21.21■□□□□ 0.99
SATB2-201ENST00000260926 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
SATB2-201ENST00000260926 TTBK1Q5TCY1 1321 aaPredicted RBP20.94■□□□□ 0.94
SATB2-201ENST00000260926 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
SATB2-201ENST00000260926 CENPBP07199 599 aaPredicted RBP20.84■□□□□ 0.93
SATB2-201ENST00000260926 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
SATB2-201ENST00000260926 APLP2Q06481 763 aa20.73■□□□□ 0.91
SATB2-201ENST00000260926 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
SATB2-201ENST00000260926 YTHDC1Q96MU7 727 aaKnown RBP20.4■□□□□ 0.86
SATB2-201ENST00000260926 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
SATB2-201ENST00000260926 PPARGC1BQ86YN6 1023 aaKnown RBP20.35■□□□□ 0.85
SATB2-201ENST00000260926 ATP1B4Q9UN42 357 aaPredicted RBP20.29■□□□□ 0.84
SATB2-201ENST00000260926 LOC105371045A0A1W2PR82 267 aa20.24■□□□□ 0.83
SATB2-201ENST00000260926 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
SATB2-201ENST00000260926 NEFLP07196 543 aa20.18■□□□□ 0.82
SATB2-201ENST00000260926 ZEB1P37275 1124 aaPredicted RBP20.04■□□□□ 0.8
SATB2-201ENST00000260926 ABCC9O60706 1549 aa20.04■□□□□ 0.8
SATB2-201ENST00000260926 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
SATB2-201ENST00000260926 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
SATB2-201ENST00000260926 DAXXQ9UER7 740 aaPredicted RBP19.88■□□□□ 0.77
SATB2-201ENST00000260926 RTL5Q5HYW3 569 aaPredicted RBP19.84■□□□□ 0.77
SATB2-201ENST00000260926 ITGAEP38570 1179 aa19.78■□□□□ 0.76
SATB2-201ENST00000260926 HRCP23327 699 aa19.75■□□□□ 0.75
SATB2-201ENST00000260926 HNRNPUL2Q1KMD3 747 aaKnown RBP19.7■□□□□ 0.74
SATB2-201ENST00000260926 GLIPR1L2Q4G1C9 344 aa19.57■□□□□ 0.72
SATB2-201ENST00000260926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
SATB2-201ENST00000260926 EIF5BO60841 1220 aaKnown RBP19.53■□□□□ 0.72
SATB2-201ENST00000260926 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
SATB2-201ENST00000260926 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
SATB2-201ENST00000260926 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
SATB2-201ENST00000260926 MYT1LQ9UL68 1186 aa19.28■□□□□ 0.68
SATB2-201ENST00000260926 CNGB1Q14028 1251 aaPredicted RBP19.27■□□□□ 0.68
SATB2-201ENST00000260926 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
SATB2-201ENST00000260926 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
SATB2-201ENST00000260926 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
SATB2-201ENST00000260926 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
SATB2-201ENST00000260926 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
SATB2-201ENST00000260926 GTF3C3Q9Y5Q9 886 aa19.06■□□□□ 0.64
SATB2-201ENST00000260926 NEUROD1Q13562 356 aa19.06■□□□□ 0.64
SATB2-201ENST00000260926 FBLN2P98095 1184 aa19.05■□□□□ 0.64
SATB2-201ENST00000260926 ARID3CA6NKF2 412 aa19.02■□□□□ 0.63
SATB2-201ENST00000260926 TRIM52Q96A61 297 aa19.01■□□□□ 0.63
SATB2-201ENST00000260926 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
SATB2-201ENST00000260926 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
SATB2-201ENST00000260926 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
SATB2-201ENST00000260926 ZNF326Q5BKZ1 582 aaKnown RBP18.82■□□□□ 0.6
SATB2-201ENST00000260926 BCANQ96GW7 911 aa18.81■□□□□ 0.6
SATB2-201ENST00000260926 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
SATB2-201ENST00000260926 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.6
SATB2-201ENST00000260926 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
SATB2-201ENST00000260926 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
SATB2-201ENST00000260926 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
SATB2-201ENST00000260926 ANP32AP39687 249 aaKnown RBP18.65■□□□□ 0.58
SATB2-201ENST00000260926 ANP32BQ92688 251 aaKnown RBP18.62■□□□□ 0.57
SATB2-201ENST00000260926 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
SATB2-201ENST00000260926 TNNT2P45379 298 aaPredicted RBP18.59■□□□□ 0.57
SATB2-201ENST00000260926 ANP32CO43423 234 aa18.59■□□□□ 0.57
SATB2-201ENST00000260926 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
SATB2-201ENST00000260926 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
SATB2-201ENST00000260926 BCL11AQ9H165 835 aa18.5■□□□□ 0.55
SATB2-201ENST00000260926 CHIC2Q9UKJ5 165 aa18.5■□□□□ 0.55
SATB2-201ENST00000260926 CLIP1P30622 1438 aa18.46■□□□□ 0.55
SATB2-201ENST00000260926 CDK11BP21127 795 aaKnown RBP18.45■□□□□ 0.54
SATB2-201ENST00000260926 NACADO15069 1562 aa18.45■□□□□ 0.54
SATB2-201ENST00000260926 NBR1Q14596 966 aa18.42■□□□□ 0.54
SATB2-201ENST00000260926 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
SATB2-201ENST00000260926 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
SATB2-201ENST00000260926 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
SATB2-201ENST00000260926 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
SATB2-201ENST00000260926 TONSLQ96HA7 1378 aa18.36■□□□□ 0.53
SATB2-201ENST00000260926 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
SATB2-201ENST00000260926 ANP32EQ9BTT0 268 aa18.32■□□□□ 0.52
SATB2-201ENST00000260926 MTUS2Q5JR59 1369 aa18.32■□□□□ 0.52
SATB2-201ENST00000260926 HIRIP3Q9BW71 556 aaPredicted RBP18.32■□□□□ 0.52
SATB2-201ENST00000260926 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
SATB2-201ENST00000260926 GOLGA3Q08378 1498 aa18.28■□□□□ 0.52
SATB2-201ENST00000260926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.26■□□□□ 0.51
SATB2-201ENST00000260926 EEA1Q15075 1411 aa18.25■□□□□ 0.51
SATB2-201ENST00000260926 RRP7BPQ9NSQ0 103 aa18.24■□□□□ 0.51
SATB2-201ENST00000260926 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
SATB2-201ENST00000260926 CHGAP10645 457 aaKnown RBP18.23■□□□□ 0.51
SATB2-201ENST00000260926 TRIM44Q96DX7 344 aaPredicted RBP18.23■□□□□ 0.51
SATB2-201ENST00000260926 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
SATB2-201ENST00000260926 SOGA1O94964 1423 aa18.2■□□□□ 0.5
SATB2-201ENST00000260926 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
SATB2-201ENST00000260926 TNIKQ9UKE5 1360 aa18.2■□□□□ 0.5
SATB2-201ENST00000260926 MIER1Q8N108 512 aa18.19■□□□□ 0.5
SATB2-201ENST00000260926 NCLP19338 710 aaKnown RBP18.19■□□□□ 0.5
SATB2-201ENST00000260926 AMER1Q5JTC6 1135 aaPredicted RBP18.18■□□□□ 0.5
SATB2-201ENST00000260926 ARXQ96QS3 562 aa18.17■□□□□ 0.5
SATB2-201ENST00000260926 FAM9BQ8IZU0 186 aa18.17■□□□□ 0.5
SATB2-201ENST00000260926 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms