RNA–Protein interactions for RNA: ENST00000564969.5

FANCA-217, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 850 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-217ENST00000564969 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
FANCA-217ENST00000564969 CCDC180Q9P1Z9 1646 aa22.99■■□□□ 1.27
FANCA-217ENST00000564969 ABCC9O60706 1549 aa22.1■■□□□ 1.13
FANCA-217ENST00000564969 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
FANCA-217ENST00000564969 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
FANCA-217ENST00000564969 DCAF1Q9Y4B6 1507 aa21.76■■□□□ 1.07
FANCA-217ENST00000564969 MYO15BQ96JP2 1530 aa21.67■■□□□ 1.06
FANCA-217ENST00000564969 NACADO15069 1562 aa21.59■■□□□ 1.05
FANCA-217ENST00000564969 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
FANCA-217ENST00000564969 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
FANCA-217ENST00000564969 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
FANCA-217ENST00000564969 AEBP2Q6ZN18 517 aaPredicted RBP21■□□□□ 0.95
FANCA-217ENST00000564969 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.922e-7■■■□□ 18.3
FANCA-217ENST00000564969 UNC13AQ9UPW8 1703 aa20.77■□□□□ 0.92
FANCA-217ENST00000564969 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
FANCA-217ENST00000564969 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
FANCA-217ENST00000564969 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
FANCA-217ENST00000564969 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
FANCA-217ENST00000564969 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
FANCA-217ENST00000564969 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
FANCA-217ENST00000564969 EIF4G1Q04637 1599 aaKnown RBP20.19■□□□□ 0.82
FANCA-217ENST00000564969 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
FANCA-217ENST00000564969 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
FANCA-217ENST00000564969 PEG3Q9GZU2 1588 aa20.02■□□□□ 0.8
FANCA-217ENST00000564969 SMARCA2P51531 1590 aa20.01■□□□□ 0.79
FANCA-217ENST00000564969 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
FANCA-217ENST00000564969 WIZO95785 1651 aa19.96■□□□□ 0.79
FANCA-217ENST00000564969 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
FANCA-217ENST00000564969 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
FANCA-217ENST00000564969 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
FANCA-217ENST00000564969 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
FANCA-217ENST00000564969 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
FANCA-217ENST00000564969 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
FANCA-217ENST00000564969 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
FANCA-217ENST00000564969 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
FANCA-217ENST00000564969 CFTRP13569 1480 aa19.41■□□□□ 0.7
FANCA-217ENST00000564969 LAMC3Q9Y6N6 1575 aa19.28■□□□□ 0.68
FANCA-217ENST00000564969 NESP48681 1621 aa19.25■□□□□ 0.67
FANCA-217ENST00000564969 PDS5BQ9NTI5 1447 aa19.24■□□□□ 0.67
FANCA-217ENST00000564969 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
FANCA-217ENST00000564969 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
FANCA-217ENST00000564969 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.64
FANCA-217ENST00000564969 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
FANCA-217ENST00000564969 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
FANCA-217ENST00000564969 ERCC6Q03468 1493 aa19.02■□□□□ 0.63
FANCA-217ENST00000564969 ABCC8Q09428 1581 aa19.02■□□□□ 0.63
FANCA-217ENST00000564969 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
FANCA-217ENST00000564969 CUX1P39880 1505 aa18.93■□□□□ 0.62
FANCA-217ENST00000564969 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
FANCA-217ENST00000564969 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
FANCA-217ENST00000564969 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
FANCA-217ENST00000564969 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
FANCA-217ENST00000564969 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
FANCA-217ENST00000564969 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.61
FANCA-217ENST00000564969 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
FANCA-217ENST00000564969 WDR62O43379 1518 aa18.82■□□□□ 0.6
FANCA-217ENST00000564969 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
FANCA-217ENST00000564969 SOGA1O94964 1423 aa18.78■□□□□ 0.6
FANCA-217ENST00000564969 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
FANCA-217ENST00000564969 THOC2Q8NI27 1593 aaKnown RBP18.76■□□□□ 0.59
FANCA-217ENST00000564969 RAD54L2Q9Y4B4 1467 aa18.7■□□□□ 0.58
FANCA-217ENST00000564969 CUX2O14529 1486 aa18.69■□□□□ 0.58
FANCA-217ENST00000564969 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
FANCA-217ENST00000564969 EEA1Q15075 1411 aa18.67■□□□□ 0.58
FANCA-217ENST00000564969 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
FANCA-217ENST00000564969 KIF27Q86VH2 1401 aa18.66■□□□□ 0.58
FANCA-217ENST00000564969 FAM9AQ8IZU1 332 aaPredicted RBP18.63■□□□□ 0.57
FANCA-217ENST00000564969 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
FANCA-217ENST00000564969 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
FANCA-217ENST00000564969 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
FANCA-217ENST00000564969 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
FANCA-217ENST00000564969 IGF1RP08069 1367 aa18.55■□□□□ 0.56
FANCA-217ENST00000564969 GAPVD1Q14C86 1478 aa18.53■□□□□ 0.56
FANCA-217ENST00000564969 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.568e-7■■■■■ 28.7
FANCA-217ENST00000564969 ZNF608Q9ULD9 1512 aaPredicted RBP18.51■□□□□ 0.55
FANCA-217ENST00000564969 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
FANCA-217ENST00000564969 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
FANCA-217ENST00000564969 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
FANCA-217ENST00000564969 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
FANCA-217ENST00000564969 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
FANCA-217ENST00000564969 PRXQ9BXM0 1461 aa18.41■□□□□ 0.54
FANCA-217ENST00000564969 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
FANCA-217ENST00000564969 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
FANCA-217ENST00000564969 FHAD1B1AJZ9 1412 aa18.36■□□□□ 0.53
FANCA-217ENST00000564969 RAPGEF2Q9Y4G8 1499 aa18.35■□□□□ 0.53
FANCA-217ENST00000564969 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.53
FANCA-217ENST00000564969 GOLGA3Q08378 1498 aa18.33■□□□□ 0.52
FANCA-217ENST00000564969 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
FANCA-217ENST00000564969 SNAPC4Q5SXM2 1469 aa18.32■□□□□ 0.52
FANCA-217ENST00000564969 KIF21BO75037 1637 aa18.31■□□□□ 0.52
FANCA-217ENST00000564969 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
FANCA-217ENST00000564969 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
FANCA-217ENST00000564969 CUL7Q14999 1698 aa18.3■□□□□ 0.52
FANCA-217ENST00000564969 PBRM1Q86U86 1689 aa18.27■□□□□ 0.52
FANCA-217ENST00000564969 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
FANCA-217ENST00000564969 FBLN2P98095 1184 aa18.26■□□□□ 0.51
FANCA-217ENST00000564969 TNIKQ9UKE5 1360 aa18.25■□□□□ 0.51
FANCA-217ENST00000564969 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
FANCA-217ENST00000564969 GRIN2AQ12879 1464 aa18.2■□□□□ 0.5
FANCA-217ENST00000564969 NUP160Q12769 1436 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms