RNA–Protein interactions for RNA: ENST00000567879.5

FANCA-226, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 3

Gene FANCA, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-226ENST00000567879 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
FANCA-226ENST00000567879 CCDC180Q9P1Z9 1646 aa30.13■■■□□ 2.41
FANCA-226ENST00000567879 ABCC9O60706 1549 aa29.56■■■□□ 2.32
FANCA-226ENST00000567879 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
FANCA-226ENST00000567879 NACADO15069 1562 aa28.34■■■□□ 2.13
FANCA-226ENST00000567879 MYO15BQ96JP2 1530 aa28.16■■■□□ 2.1
FANCA-226ENST00000567879 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
FANCA-226ENST00000567879 DCAF8L2P0C7V8 631 aa28.07■■■□□ 2.08
FANCA-226ENST00000567879 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
FANCA-226ENST00000567879 UNC13AQ9UPW8 1703 aa27.85■■■□□ 2.05
FANCA-226ENST00000567879 BICRAQ9NZM4 1560 aa27.62■■■□□ 2.01
FANCA-226ENST00000567879 PABPN1Q86U42 306 aaKnown RBP eCLIP27.56■■■□□ 22e-7■■■■□ 23
FANCA-226ENST00000567879 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
FANCA-226ENST00000567879 DNAJC5BQ9UF47 199 aa27.37■■□□□ 1.97
FANCA-226ENST00000567879 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
FANCA-226ENST00000567879 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
FANCA-226ENST00000567879 CC2D2AQ9P2K1 1620 aa26.79■■□□□ 1.88
FANCA-226ENST00000567879 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
FANCA-226ENST00000567879 SMARCA4P51532 1647 aa26.24■■□□□ 1.79
FANCA-226ENST00000567879 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
FANCA-226ENST00000567879 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
FANCA-226ENST00000567879 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
FANCA-226ENST00000567879 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
FANCA-226ENST00000567879 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
FANCA-226ENST00000567879 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
FANCA-226ENST00000567879 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
FANCA-226ENST00000567879 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
FANCA-226ENST00000567879 WIZO95785 1651 aa25.71■■□□□ 1.71
FANCA-226ENST00000567879 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
FANCA-226ENST00000567879 NESP48681 1621 aa25.56■■□□□ 1.68
FANCA-226ENST00000567879 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
FANCA-226ENST00000567879 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
FANCA-226ENST00000567879 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
FANCA-226ENST00000567879 CUX2O14529 1486 aa25.35■■□□□ 1.65
FANCA-226ENST00000567879 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
FANCA-226ENST00000567879 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
FANCA-226ENST00000567879 THOC2Q8NI27 1593 aaKnown RBP25.28■■□□□ 1.64
FANCA-226ENST00000567879 PDS5BQ9NTI5 1447 aa25.27■■□□□ 1.64
FANCA-226ENST00000567879 CFTRP13569 1480 aa25.19■■□□□ 1.62
FANCA-226ENST00000567879 CCDC88BA6NC98 1476 aa25.11■■□□□ 1.61
FANCA-226ENST00000567879 FANCD2Q9BXW9 1451 aa25.05■■□□□ 1.6
FANCA-226ENST00000567879 MRC2Q9UBG0 1479 aa25.05■■□□□ 1.6
FANCA-226ENST00000567879 PRDM2Q13029 1718 aa25.04■■□□□ 1.6
FANCA-226ENST00000567879 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
FANCA-226ENST00000567879 WDR62O43379 1518 aa25.02■■□□□ 1.6
FANCA-226ENST00000567879 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
FANCA-226ENST00000567879 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
FANCA-226ENST00000567879 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
FANCA-226ENST00000567879 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
FANCA-226ENST00000567879 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
FANCA-226ENST00000567879 DNMBPQ6XZF7 1577 aa24.61■■□□□ 1.53
FANCA-226ENST00000567879 IFT140Q96RY7 1462 aa24.52■■□□□ 1.52
FANCA-226ENST00000567879 ZNF608Q9ULD9 1512 aaPredicted RBP24.45■■□□□ 1.5
FANCA-226ENST00000567879 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
FANCA-226ENST00000567879 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
FANCA-226ENST00000567879 CUX1P39880 1505 aa24.4■■□□□ 1.5
FANCA-226ENST00000567879 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
FANCA-226ENST00000567879 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
FANCA-226ENST00000567879 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
FANCA-226ENST00000567879 SOGA1O94964 1423 aa24.28■■□□□ 1.48
FANCA-226ENST00000567879 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.478e-7■■■■■ 28.7
FANCA-226ENST00000567879 WDR97A6NE52 1622 aa24.23■■□□□ 1.47
FANCA-226ENST00000567879 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
FANCA-226ENST00000567879 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
FANCA-226ENST00000567879 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
FANCA-226ENST00000567879 TOP2BQ02880 1626 aa24.15■■□□□ 1.46
FANCA-226ENST00000567879 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
FANCA-226ENST00000567879 WRNQ14191 1432 aaPredicted RBP eCLIP24.12■■□□□ 1.45
FANCA-226ENST00000567879 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
FANCA-226ENST00000567879 CHD1O14646 1710 aa24.1■■□□□ 1.45
FANCA-226ENST00000567879 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
FANCA-226ENST00000567879 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
FANCA-226ENST00000567879 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
FANCA-226ENST00000567879 SNAPC4Q5SXM2 1469 aa24.03■■□□□ 1.44
FANCA-226ENST00000567879 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
FANCA-226ENST00000567879 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
FANCA-226ENST00000567879 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
FANCA-226ENST00000567879 RIMBP3CA6NJZ7 1639 aa23.91■■□□□ 1.42
FANCA-226ENST00000567879 RIMBP3BA6NNM3 1639 aa23.91■■□□□ 1.42
FANCA-226ENST00000567879 RIMBP3Q9UFD9 1639 aa23.91■■□□□ 1.42
FANCA-226ENST00000567879 FBLN2P98095 1184 aa23.89■■□□□ 1.41
FANCA-226ENST00000567879 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
FANCA-226ENST00000567879 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
FANCA-226ENST00000567879 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
FANCA-226ENST00000567879 ADAMTS12P58397 1594 aa23.82■■□□□ 1.4
FANCA-226ENST00000567879 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
FANCA-226ENST00000567879 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
FANCA-226ENST00000567879 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
FANCA-226ENST00000567879 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
FANCA-226ENST00000567879 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
FANCA-226ENST00000567879 NUP160Q12769 1436 aa23.67■■□□□ 1.38
FANCA-226ENST00000567879 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
FANCA-226ENST00000567879 KIF27Q86VH2 1401 aa23.61■■□□□ 1.37
FANCA-226ENST00000567879 IGF1RP08069 1367 aa23.59■■□□□ 1.37
FANCA-226ENST00000567879 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
FANCA-226ENST00000567879 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
FANCA-226ENST00000567879 CUL7Q14999 1698 aa23.55■■□□□ 1.36
FANCA-226ENST00000567879 ERCC6L2Q5T890 1561 aa23.49■■□□□ 1.35
FANCA-226ENST00000567879 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
FANCA-226ENST00000567879 CARMIL1Q5VZK9 1371 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms