RNA–Protein interactions for RNA: ENST00000614512.4

SATB2-211, Transcript of SATB homeobox 2, humanhuman

TSL 5 BASIC

Gene SATB2, Length 4,972 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-211ENST00000614512 DCAF8L2P0C7V8 631 aa24.07■■□□□ 1.44
SATB2-211ENST00000614512 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
SATB2-211ENST00000614512 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
SATB2-211ENST00000614512 SHROOM4Q9ULL8 1493 aa22.9■■□□□ 1.26
SATB2-211ENST00000614512 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.17
SATB2-211ENST00000614512 PCGF6Q9BYE7 350 aa21.94■■□□□ 1.1
SATB2-211ENST00000614512 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
SATB2-211ENST00000614512 APLP2Q06481 763 aa21.67■■□□□ 1.06
SATB2-211ENST00000614512 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
SATB2-211ENST00000614512 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
SATB2-211ENST00000614512 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
SATB2-211ENST00000614512 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
SATB2-211ENST00000614512 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
SATB2-211ENST00000614512 RANGAP1P46060 587 aaPredicted RBP21.25■□□□□ 0.99
SATB2-211ENST00000614512 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
SATB2-211ENST00000614512 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
SATB2-211ENST00000614512 PPARGC1BQ86YN6 1023 aaKnown RBP21.03■□□□□ 0.96
SATB2-211ENST00000614512 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
SATB2-211ENST00000614512 HRCP23327 699 aa20.99■□□□□ 0.95
SATB2-211ENST00000614512 TRIM26Q12899 539 aaPredicted RBP20.99■□□□□ 0.95
SATB2-211ENST00000614512 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
SATB2-211ENST00000614512 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
SATB2-211ENST00000614512 YTHDC1Q96MU7 727 aaKnown RBP20.82■□□□□ 0.92
SATB2-211ENST00000614512 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
SATB2-211ENST00000614512 NEFLP07196 543 aa20.55■□□□□ 0.88
SATB2-211ENST00000614512 HNRNPUL2Q1KMD3 747 aaKnown RBP20.48■□□□□ 0.87
SATB2-211ENST00000614512 ITGAEP38570 1179 aa20.46■□□□□ 0.87
SATB2-211ENST00000614512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.4■□□□□ 0.86
SATB2-211ENST00000614512 MYT1Q01538 1121 aa20.27■□□□□ 0.84
SATB2-211ENST00000614512 DIEXFQ68CQ4 756 aaKnown RBP20.23■□□□□ 0.83
SATB2-211ENST00000614512 ABCC9O60706 1549 aa20.16■□□□□ 0.82
SATB2-211ENST00000614512 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
SATB2-211ENST00000614512 POLR3GLQ9BT43 218 aa20.08■□□□□ 0.81
SATB2-211ENST00000614512 CNGB1Q14028 1251 aaPredicted RBP20■□□□□ 0.79
SATB2-211ENST00000614512 FAM50AQ14320 339 aaKnown RBP19.91■□□□□ 0.78
SATB2-211ENST00000614512 GTF3C3Q9Y5Q9 886 aa19.88■□□□□ 0.77
SATB2-211ENST00000614512 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
SATB2-211ENST00000614512 NEUROD1Q13562 356 aa19.81■□□□□ 0.76
SATB2-211ENST00000614512 ZNF316A6NFI3 1004 aaPredicted RBP19.78■□□□□ 0.76
SATB2-211ENST00000614512 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
SATB2-211ENST00000614512 DAXXQ9UER7 740 aaPredicted RBP19.75■□□□□ 0.75
SATB2-211ENST00000614512 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
SATB2-211ENST00000614512 BCANQ96GW7 911 aa19.67■□□□□ 0.74
SATB2-211ENST00000614512 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
SATB2-211ENST00000614512 ACIN1Q9UKV3 1341 aaKnown RBP19.66■□□□□ 0.74
SATB2-211ENST00000614512 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
SATB2-211ENST00000614512 ANP32CO43423 234 aa19.6■□□□□ 0.73
SATB2-211ENST00000614512 P3H3Q8IVL6 736 aa19.53■□□□□ 0.72
SATB2-211ENST00000614512 ZNF326Q5BKZ1 582 aaKnown RBP19.5■□□□□ 0.71
SATB2-211ENST00000614512 SLC4A1APQ9BWU0 796 aaKnown RBP19.5■□□□□ 0.71
SATB2-211ENST00000614512 RTL5Q5HYW3 569 aaPredicted RBP19.46■□□□□ 0.71
SATB2-211ENST00000614512 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
SATB2-211ENST00000614512 CLSPNQ9HAW4 1339 aa19.44■□□□□ 0.7
SATB2-211ENST00000614512 ARID3CA6NKF2 412 aa19.4■□□□□ 0.7
SATB2-211ENST00000614512 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
SATB2-211ENST00000614512 FBLN2P98095 1184 aa19.37■□□□□ 0.69
SATB2-211ENST00000614512 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
SATB2-211ENST00000614512 DDX10Q13206 875 aaKnown RBP19.23■□□□□ 0.67
SATB2-211ENST00000614512 FKBP8Q14318 412 aa19.19■□□□□ 0.66
SATB2-211ENST00000614512 TONSLQ96HA7 1378 aa19.18■□□□□ 0.66
SATB2-211ENST00000614512 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
SATB2-211ENST00000614512 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
SATB2-211ENST00000614512 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
SATB2-211ENST00000614512 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.65
SATB2-211ENST00000614512 MIER1Q8N108 512 aa19.13■□□□□ 0.65
SATB2-211ENST00000614512 HNRNPUQ00839 825 aaKnown RBP eCLIP19.12■□□□□ 0.65
SATB2-211ENST00000614512 CLIP1P30622 1438 aa19.08■□□□□ 0.64
SATB2-211ENST00000614512 FAM9BQ8IZU0 186 aa19.03■□□□□ 0.64
SATB2-211ENST00000614512 CHIC2Q9UKJ5 165 aa19.03■□□□□ 0.64
SATB2-211ENST00000614512 ANP32AP39687 249 aaKnown RBP19.01■□□□□ 0.63
SATB2-211ENST00000614512 CANXP27824 592 aaKnown RBP19■□□□□ 0.63
SATB2-211ENST00000614512 CEP162Q5TB80 1403 aa19■□□□□ 0.63
SATB2-211ENST00000614512 HIRIP3Q9BW71 556 aaPredicted RBP18.98■□□□□ 0.63
SATB2-211ENST00000614512 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
SATB2-211ENST00000614512 EEA1Q15075 1411 aa18.93■□□□□ 0.62
SATB2-211ENST00000614512 ZBTB47Q9UFB7 747 aaPredicted RBP18.91■□□□□ 0.62
SATB2-211ENST00000614512 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
SATB2-211ENST00000614512 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
SATB2-211ENST00000614512 SALL2Q9Y467 1007 aaPredicted RBP18.9■□□□□ 0.62
SATB2-211ENST00000614512 GOLGA3Q08378 1498 aa18.89■□□□□ 0.62
SATB2-211ENST00000614512 MRS2Q9HD23 443 aa18.87■□□□□ 0.61
SATB2-211ENST00000614512 TMC1Q8TDI8 760 aa18.85■□□□□ 0.61
SATB2-211ENST00000614512 TNIKQ9UKE5 1360 aa18.84■□□□□ 0.61
SATB2-211ENST00000614512 WRNQ14191 1432 aaPredicted RBP eCLIP18.84■□□□□ 0.61
SATB2-211ENST00000614512 NEFMP07197 916 aa18.84■□□□□ 0.61
SATB2-211ENST00000614512 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
SATB2-211ENST00000614512 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
SATB2-211ENST00000614512 RRP7BPQ9NSQ0 103 aa18.79■□□□□ 0.6
SATB2-211ENST00000614512 EIF4G2P78344 907 aaKnown RBP eCLIP18.77■□□□□ 0.66e-6■■■■□ 25.1
SATB2-211ENST00000614512 KDM2AQ9Y2K7 1162 aa18.77■□□□□ 0.6
SATB2-211ENST00000614512 CHGAP10645 457 aaKnown RBP18.76■□□□□ 0.59
SATB2-211ENST00000614512 TSPY4P0CV99 314 aa18.76■□□□□ 0.59
SATB2-211ENST00000614512 TSPY10P0CW01 314 aa18.76■□□□□ 0.59
SATB2-211ENST00000614512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.59
SATB2-211ENST00000614512 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
SATB2-211ENST00000614512 RB1CC1Q8TDY2 1594 aa18.73■□□□□ 0.59
SATB2-211ENST00000614512 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
SATB2-211ENST00000614512 CECR2Q9BXF3 1484 aa18.7■□□□□ 0.58
SATB2-211ENST00000614512 NACADO15069 1562 aa18.65■□□□□ 0.58
SATB2-211ENST00000614512 NBR1Q14596 966 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms