RNA–Protein interactions for RNA: ENST00000335500.8

GPATCH8-201, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 8,109 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-201ENST00000335500 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
GPATCH8-201ENST00000335500 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
GPATCH8-201ENST00000335500 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
GPATCH8-201ENST00000335500 SUPT5HO00267 1087 aaKnown RBP14.11□□□□□ -0.15
GPATCH8-201ENST00000335500 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
GPATCH8-201ENST00000335500 APLP2Q06481 763 aa13.78□□□□□ -0.2
GPATCH8-201ENST00000335500 MYT1Q01538 1121 aa13.7□□□□□ -0.22
GPATCH8-201ENST00000335500 FAM9AQ8IZU1 332 aaPredicted RBP13.68□□□□□ -0.22
GPATCH8-201ENST00000335500 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
GPATCH8-201ENST00000335500 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.25
GPATCH8-201ENST00000335500 CCER1Q8TC90 406 aaPredicted RBP13.48□□□□□ -0.25
GPATCH8-201ENST00000335500 PCGF6Q9BYE7 350 aa13.36□□□□□ -0.27
GPATCH8-201ENST00000335500 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
GPATCH8-201ENST00000335500 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
GPATCH8-201ENST00000335500 ERICH6Q7L0X2 663 aa13.27□□□□□ -0.29
GPATCH8-201ENST00000335500 NEFLP07196 543 aa13.17□□□□□ -0.3
GPATCH8-201ENST00000335500 UBTFP17480 764 aaKnown RBP13.09□□□□□ -0.31
GPATCH8-201ENST00000335500 TRIM26Q12899 539 aaPredicted RBP13.07□□□□□ -0.32
GPATCH8-201ENST00000335500 TTBK1Q5TCY1 1321 aaPredicted RBP12.97□□□□□ -0.33
GPATCH8-201ENST00000335500 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
GPATCH8-201ENST00000335500 HRCP23327 699 aa12.87□□□□□ -0.35
GPATCH8-201ENST00000335500 RANGAP1P46060 587 aaPredicted RBP12.85□□□□□ -0.35
GPATCH8-201ENST00000335500 YTHDC1Q96MU7 727 aaKnown RBP12.84□□□□□ -0.35
GPATCH8-201ENST00000335500 DAXXQ9UER7 740 aaPredicted RBP12.78□□□□□ -0.36
GPATCH8-201ENST00000335500 CHIC1Q5VXU3 224 aa12.68□□□□□ -0.38
GPATCH8-201ENST00000335500 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
GPATCH8-201ENST00000335500 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
GPATCH8-201ENST00000335500 PPARGC1BQ86YN6 1023 aaKnown RBP12.51□□□□□ -0.41
GPATCH8-201ENST00000335500 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
GPATCH8-201ENST00000335500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
GPATCH8-201ENST00000335500 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
GPATCH8-201ENST00000335500 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
GPATCH8-201ENST00000335500 ITGAEP38570 1179 aa12.48□□□□□ -0.41
GPATCH8-201ENST00000335500 CLSPNQ9HAW4 1339 aa12.47□□□□□ -0.41
GPATCH8-201ENST00000335500 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
GPATCH8-201ENST00000335500 MYT1LQ9UL68 1186 aa12.44□□□□□ -0.42
GPATCH8-201ENST00000335500 POLR3GLQ9BT43 218 aa12.41□□□□□ -0.42
GPATCH8-201ENST00000335500 ANP32CO43423 234 aa12.36□□□□□ -0.43
GPATCH8-201ENST00000335500 FAM50AQ14320 339 aaKnown RBP12.33□□□□□ -0.44
GPATCH8-201ENST00000335500 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
GPATCH8-201ENST00000335500 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
GPATCH8-201ENST00000335500 ABCC9O60706 1549 aa12.26□□□□□ -0.45
GPATCH8-201ENST00000335500 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
GPATCH8-201ENST00000335500 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
GPATCH8-201ENST00000335500 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
GPATCH8-201ENST00000335500 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
GPATCH8-201ENST00000335500 GTF3C3Q9Y5Q9 886 aa12.19□□□□□ -0.46
GPATCH8-201ENST00000335500 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
GPATCH8-201ENST00000335500 ACIN1Q9UKV3 1341 aaKnown RBP12.17□□□□□ -0.46
GPATCH8-201ENST00000335500 NEUROD1Q13562 356 aa12.16□□□□□ -0.46
GPATCH8-201ENST00000335500 NEFMP07197 916 aa12.16□□□□□ -0.46
GPATCH8-201ENST00000335500 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
GPATCH8-201ENST00000335500 ANP32AP39687 249 aaKnown RBP12.15□□□□□ -0.47
GPATCH8-201ENST00000335500 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
GPATCH8-201ENST00000335500 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
GPATCH8-201ENST00000335500 TONSLQ96HA7 1378 aa12.05□□□□□ -0.48
GPATCH8-201ENST00000335500 EEA1Q15075 1411 aa12.05□□□□□ -0.48
GPATCH8-201ENST00000335500 PABPN1Q86U42 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
GPATCH8-201ENST00000335500 RB1CC1Q8TDY2 1594 aa12.02□□□□□ -0.48
GPATCH8-201ENST00000335500 ANP32BQ92688 251 aaKnown RBP12.02□□□□□ -0.49
GPATCH8-201ENST00000335500 UPF2Q9HAU5 1272 aaKnown RBP12□□□□□ -0.49
GPATCH8-201ENST00000335500 ZNF326Q5BKZ1 582 aaKnown RBP12□□□□□ -0.49
GPATCH8-201ENST00000335500 NACADO15069 1562 aa11.97□□□□□ -0.49
GPATCH8-201ENST00000335500 BCANQ96GW7 911 aa11.95□□□□□ -0.5
GPATCH8-201ENST00000335500 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.94□□□□□ -0.5
GPATCH8-201ENST00000335500 GLIPR1L2Q4G1C9 344 aa11.94□□□□□ -0.5
GPATCH8-201ENST00000335500 FBLN2P98095 1184 aa11.88□□□□□ -0.51
GPATCH8-201ENST00000335500 GOLGA3Q08378 1498 aa11.88□□□□□ -0.51
GPATCH8-201ENST00000335500 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
GPATCH8-201ENST00000335500 HSP90AA1P07900 732 aaKnown RBP11.87□□□□□ -0.51
GPATCH8-201ENST00000335500 EIF5BO60841 1220 aaKnown RBP11.85□□□□□ -0.51
GPATCH8-201ENST00000335500 CLIP1P30622 1438 aa11.85□□□□□ -0.51
GPATCH8-201ENST00000335500 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
GPATCH8-201ENST00000335500 FKBP8Q14318 412 aa11.84□□□□□ -0.51
GPATCH8-201ENST00000335500 ANP32EQ9BTT0 268 aa11.83□□□□□ -0.52
GPATCH8-201ENST00000335500 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
GPATCH8-201ENST00000335500 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
GPATCH8-201ENST00000335500 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
GPATCH8-201ENST00000335500 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
GPATCH8-201ENST00000335500 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
GPATCH8-201ENST00000335500 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
GPATCH8-201ENST00000335500 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
GPATCH8-201ENST00000335500 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
GPATCH8-201ENST00000335500 BAZ1AQ9NRL2 1556 aaPredicted RBP11.78□□□□□ -0.52
GPATCH8-201ENST00000335500 WDR43Q15061 677 aaKnown RBP eCLIP11.77□□□□□ -0.53
GPATCH8-201ENST00000335500 TSPY4P0CV99 314 aa11.77□□□□□ -0.53
GPATCH8-201ENST00000335500 TSPY10P0CW01 314 aa11.77□□□□□ -0.53
GPATCH8-201ENST00000335500 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
GPATCH8-201ENST00000335500 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
GPATCH8-201ENST00000335500 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
GPATCH8-201ENST00000335500 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
GPATCH8-201ENST00000335500 NPM2Q86SE8 214 aaKnown RBP11.74□□□□□ -0.53
GPATCH8-201ENST00000335500 CEP162Q5TB80 1403 aa11.74□□□□□ -0.53
GPATCH8-201ENST00000335500 BECN1Q14457 450 aa11.73□□□□□ -0.53
GPATCH8-201ENST00000335500 CDCA8Q53HL2 280 aa11.72□□□□□ -0.53
GPATCH8-201ENST00000335500 KIF27Q86VH2 1401 aa11.72□□□□□ -0.53
GPATCH8-201ENST00000335500 MYH16Q9H6N6 1097 aa11.72□□□□□ -0.53
GPATCH8-201ENST00000335500 FAM9BQ8IZU0 186 aa11.72□□□□□ -0.53
GPATCH8-201ENST00000335500 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
GPATCH8-201ENST00000335500 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms