RNA–Protein interactions for RNA: ENST00000561722.5

FANCA-208, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-208ENST00000561722 NISCHQ9Y2I1 1504 aa29.59■■■□□ 2.33
FANCA-208ENST00000561722 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
FANCA-208ENST00000561722 ABCC9O60706 1549 aa25.58■■□□□ 1.68
FANCA-208ENST00000561722 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
FANCA-208ENST00000561722 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
FANCA-208ENST00000561722 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
FANCA-208ENST00000561722 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
FANCA-208ENST00000561722 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
FANCA-208ENST00000561722 NACADO15069 1562 aa24.57■■□□□ 1.52
FANCA-208ENST00000561722 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
FANCA-208ENST00000561722 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
FANCA-208ENST00000561722 UNC13AQ9UPW8 1703 aa24.09■■□□□ 1.45
FANCA-208ENST00000561722 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
FANCA-208ENST00000561722 DNAJC5BQ9UF47 199 aa23.97■■□□□ 1.43
FANCA-208ENST00000561722 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.422e-7■■■■□ 26.2
FANCA-208ENST00000561722 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
FANCA-208ENST00000561722 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
FANCA-208ENST00000561722 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
FANCA-208ENST00000561722 CC2D2AQ9P2K1 1620 aa23.09■■□□□ 1.29
FANCA-208ENST00000561722 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
FANCA-208ENST00000561722 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
FANCA-208ENST00000561722 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
FANCA-208ENST00000561722 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
FANCA-208ENST00000561722 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
FANCA-208ENST00000561722 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
FANCA-208ENST00000561722 WIZO95785 1651 aa22.65■■□□□ 1.22
FANCA-208ENST00000561722 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
FANCA-208ENST00000561722 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
FANCA-208ENST00000561722 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
FANCA-208ENST00000561722 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
FANCA-208ENST00000561722 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
FANCA-208ENST00000561722 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
FANCA-208ENST00000561722 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
FANCA-208ENST00000561722 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
FANCA-208ENST00000561722 NESP48681 1621 aa22.18■■□□□ 1.14
FANCA-208ENST00000561722 CCDC88BA6NC98 1476 aa22.11■■□□□ 1.13
FANCA-208ENST00000561722 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
FANCA-208ENST00000561722 LAMC3Q9Y6N6 1575 aa22.06■■□□□ 1.12
FANCA-208ENST00000561722 CADPSQ9ULU8 1353 aa22.04■■□□□ 1.12
FANCA-208ENST00000561722 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
FANCA-208ENST00000561722 CFTRP13569 1480 aa21.94■■□□□ 1.1
FANCA-208ENST00000561722 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
FANCA-208ENST00000561722 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
FANCA-208ENST00000561722 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
FANCA-208ENST00000561722 PRDM2Q13029 1718 aa21.83■■□□□ 1.09
FANCA-208ENST00000561722 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
FANCA-208ENST00000561722 THOC2Q8NI27 1593 aaKnown RBP21.75■■□□□ 1.07
FANCA-208ENST00000561722 CUX2O14529 1486 aa21.72■■□□□ 1.07
FANCA-208ENST00000561722 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
FANCA-208ENST00000561722 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
FANCA-208ENST00000561722 URB2Q14146 1524 aaKnown RBP21.61■■□□□ 1.05
FANCA-208ENST00000561722 WDR62O43379 1518 aa21.6■■□□□ 1.05
FANCA-208ENST00000561722 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
FANCA-208ENST00000561722 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
FANCA-208ENST00000561722 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
FANCA-208ENST00000561722 CUX1P39880 1505 aa21.43■■□□□ 1.02
FANCA-208ENST00000561722 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
FANCA-208ENST00000561722 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
FANCA-208ENST00000561722 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
FANCA-208ENST00000561722 SYNJ1O43426 1573 aa21.32■■□□□ 1
FANCA-208ENST00000561722 IFT140Q96RY7 1462 aa21.29■■□□□ 1
FANCA-208ENST00000561722 RAD54L2Q9Y4B4 1467 aa21.29■■□□□ 1
FANCA-208ENST00000561722 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
FANCA-208ENST00000561722 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
FANCA-208ENST00000561722 SOGA1O94964 1423 aa21.25■□□□□ 0.99
FANCA-208ENST00000561722 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
FANCA-208ENST00000561722 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
FANCA-208ENST00000561722 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
FANCA-208ENST00000561722 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.988e-7■■■■■ 28.7
FANCA-208ENST00000561722 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
FANCA-208ENST00000561722 WDR97A6NE52 1622 aa21.12■□□□□ 0.97
FANCA-208ENST00000561722 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
FANCA-208ENST00000561722 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
FANCA-208ENST00000561722 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
FANCA-208ENST00000561722 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
FANCA-208ENST00000561722 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
FANCA-208ENST00000561722 GRIN2BQ13224 1484 aa20.96■□□□□ 0.95
FANCA-208ENST00000561722 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
FANCA-208ENST00000561722 FBLN2P98095 1184 aa20.92■□□□□ 0.94
FANCA-208ENST00000561722 CHD1O14646 1710 aa20.88■□□□□ 0.93
FANCA-208ENST00000561722 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
FANCA-208ENST00000561722 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
FANCA-208ENST00000561722 CHMP7Q8WUX9 453 aaPredicted RBP20.82■□□□□ 0.92
FANCA-208ENST00000561722 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
FANCA-208ENST00000561722 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
FANCA-208ENST00000561722 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
FANCA-208ENST00000561722 SYNJ2O15056 1496 aa20.8■□□□□ 0.92
FANCA-208ENST00000561722 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
FANCA-208ENST00000561722 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
FANCA-208ENST00000561722 FHAD1B1AJZ9 1412 aa20.75■□□□□ 0.91
FANCA-208ENST00000561722 IGF1RP08069 1367 aa20.74■□□□□ 0.91
FANCA-208ENST00000561722 GRIN2AQ12879 1464 aa20.7■□□□□ 0.9
FANCA-208ENST00000561722 FAM9AQ8IZU1 332 aaPredicted RBP20.7■□□□□ 0.9
FANCA-208ENST00000561722 CUL7Q14999 1698 aa20.7■□□□□ 0.9
FANCA-208ENST00000561722 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
FANCA-208ENST00000561722 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
FANCA-208ENST00000561722 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
FANCA-208ENST00000561722 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
FANCA-208ENST00000561722 CEP170Q5SW79 1584 aa20.62■□□□□ 0.89
FANCA-208ENST00000561722 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms