RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
EXT1-202ENST00000436216 CCDC180Q9P1Z9 1646 aa27.12■■□□□ 1.93
EXT1-202ENST00000436216 ABCC9O60706 1549 aa26.66■■□□□ 1.86
EXT1-202ENST00000436216 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
EXT1-202ENST00000436216 NACADO15069 1562 aa25.56■■□□□ 1.68
EXT1-202ENST00000436216 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
EXT1-202ENST00000436216 MYO15BQ96JP2 1530 aa25.41■■□□□ 1.66
EXT1-202ENST00000436216 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
EXT1-202ENST00000436216 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
EXT1-202ENST00000436216 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
EXT1-202ENST00000436216 PABPN1Q86U42 306 aaKnown RBP eCLIP24.91■■□□□ 1.58
EXT1-202ENST00000436216 BICRAQ9NZM4 1560 aa24.87■■□□□ 1.57
EXT1-202ENST00000436216 SCRIBQ14160 1630 aa24.69■■□□□ 1.54
EXT1-202ENST00000436216 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
EXT1-202ENST00000436216 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
EXT1-202ENST00000436216 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.46
EXT1-202ENST00000436216 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
EXT1-202ENST00000436216 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
EXT1-202ENST00000436216 SMARCA4P51532 1647 aa23.64■■□□□ 1.38
EXT1-202ENST00000436216 NCAPD3P42695 1498 aa23.62■■□□□ 1.37
EXT1-202ENST00000436216 BAZ1AQ9NRL2 1556 aaPredicted RBP23.61■■□□□ 1.37
EXT1-202ENST00000436216 ATAD2BQ9ULI0 1458 aa23.59■■□□□ 1.37
EXT1-202ENST00000436216 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
EXT1-202ENST00000436216 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
EXT1-202ENST00000436216 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
EXT1-202ENST00000436216 HMGXB3Q12766 1538 aa23.45■■□□□ 1.34
EXT1-202ENST00000436216 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
EXT1-202ENST00000436216 WIZO95785 1651 aa23.17■■□□□ 1.3
EXT1-202ENST00000436216 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
EXT1-202ENST00000436216 NESP48681 1621 aa23.04■■□□□ 1.28
EXT1-202ENST00000436216 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
EXT1-202ENST00000436216 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
EXT1-202ENST00000436216 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
EXT1-202ENST00000436216 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
EXT1-202ENST00000436216 CUX2O14529 1486 aa22.85■■□□□ 1.25
EXT1-202ENST00000436216 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
EXT1-202ENST00000436216 CFTRP13569 1480 aa22.74■■□□□ 1.23
EXT1-202ENST00000436216 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
EXT1-202ENST00000436216 THOC2Q8NI27 1593 aaKnown RBP22.73■■□□□ 1.23
EXT1-202ENST00000436216 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
EXT1-202ENST00000436216 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
EXT1-202ENST00000436216 MRC2Q9UBG0 1479 aa22.59■■□□□ 1.21
EXT1-202ENST00000436216 CEP164Q9UPV0 1460 aa22.59■■□□□ 1.21
EXT1-202ENST00000436216 WDR62O43379 1518 aa22.53■■□□□ 1.2
EXT1-202ENST00000436216 PRDM2Q13029 1718 aa22.49■■□□□ 1.19
EXT1-202ENST00000436216 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
EXT1-202ENST00000436216 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.17
EXT1-202ENST00000436216 DNAJC5Q9H3Z4 198 aa22.36■■□□□ 1.17
EXT1-202ENST00000436216 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
EXT1-202ENST00000436216 TOPBP1Q92547 1522 aa22.24■■□□□ 1.15
EXT1-202ENST00000436216 DNMBPQ6XZF7 1577 aa22.19■■□□□ 1.14
EXT1-202ENST00000436216 IFT140Q96RY7 1462 aa22.14■■□□□ 1.13
EXT1-202ENST00000436216 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
EXT1-202ENST00000436216 POLA1P09884 1462 aaPredicted RBP22.04■■□□□ 1.12
EXT1-202ENST00000436216 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.12
EXT1-202ENST00000436216 CUX1P39880 1505 aa22.01■■□□□ 1.11
EXT1-202ENST00000436216 SOGA1O94964 1423 aa21.95■■□□□ 1.1
EXT1-202ENST00000436216 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
EXT1-202ENST00000436216 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
EXT1-202ENST00000436216 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
EXT1-202ENST00000436216 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.1
EXT1-202ENST00000436216 OSCARQ8IYS5 282 aa21.88■■□□□ 1.09
EXT1-202ENST00000436216 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
EXT1-202ENST00000436216 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
EXT1-202ENST00000436216 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
EXT1-202ENST00000436216 TOP2BQ02880 1626 aa21.79■■□□□ 1.08
EXT1-202ENST00000436216 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
EXT1-202ENST00000436216 ABCA10Q8WWZ4 1543 aa21.76■■□□□ 1.07
EXT1-202ENST00000436216 SYNJ1O43426 1573 aa21.75■■□□□ 1.07
EXT1-202ENST00000436216 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
EXT1-202ENST00000436216 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
EXT1-202ENST00000436216 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
EXT1-202ENST00000436216 ABCA5Q8WWZ7 1642 aa21.67■■□□□ 1.06
EXT1-202ENST00000436216 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
EXT1-202ENST00000436216 CHD1O14646 1710 aa21.66■■□□□ 1.06
EXT1-202ENST00000436216 FBLN2P98095 1184 aa21.63■■□□□ 1.05
EXT1-202ENST00000436216 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
EXT1-202ENST00000436216 SYNJ2O15056 1496 aa21.58■■□□□ 1.05
EXT1-202ENST00000436216 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
EXT1-202ENST00000436216 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
EXT1-202ENST00000436216 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
EXT1-202ENST00000436216 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
EXT1-202ENST00000436216 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
EXT1-202ENST00000436216 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
EXT1-202ENST00000436216 CLASP1Q7Z460 1538 aa21.48■■□□□ 1.03
EXT1-202ENST00000436216 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
EXT1-202ENST00000436216 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
EXT1-202ENST00000436216 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
EXT1-202ENST00000436216 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
EXT1-202ENST00000436216 NUP160Q12769 1436 aa21.37■■□□□ 1.01
EXT1-202ENST00000436216 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
EXT1-202ENST00000436216 IGF1RP08069 1367 aa21.35■■□□□ 1.01
EXT1-202ENST00000436216 ARAP1Q96P48 1450 aa21.32■■□□□ 1
EXT1-202ENST00000436216 CEP170Q5SW79 1584 aa21.31■■□□□ 1
EXT1-202ENST00000436216 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
EXT1-202ENST00000436216 CUL7Q14999 1698 aa21.24■□□□□ 0.99
EXT1-202ENST00000436216 SHROOM2Q13796 1616 aa21.2■□□□□ 0.98
EXT1-202ENST00000436216 CARMIL1Q5VZK9 1371 aa21.19■□□□□ 0.98
EXT1-202ENST00000436216 ERCC6L2Q5T890 1561 aa21.15■□□□□ 0.98
EXT1-202ENST00000436216 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms