RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
SLC12A4-204ENST00000541864 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
SLC12A4-204ENST00000541864 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
SLC12A4-204ENST00000541864 SUPT5HO00267 1087 aaKnown RBP20.26■□□□□ 0.83
SLC12A4-204ENST00000541864 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
SLC12A4-204ENST00000541864 ZCCHC6Q5VYS8 1495 aaKnown RBP19.79■□□□□ 0.76
SLC12A4-204ENST00000541864 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
SLC12A4-204ENST00000541864 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
SLC12A4-204ENST00000541864 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
SLC12A4-204ENST00000541864 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
SLC12A4-204ENST00000541864 FAM9AQ8IZU1 332 aaPredicted RBP18.97■□□□□ 0.63
SLC12A4-204ENST00000541864 PCGF6Q9BYE7 350 aa18.97■□□□□ 0.63
SLC12A4-204ENST00000541864 ABCC9O60706 1549 aa18.88■□□□□ 0.61
SLC12A4-204ENST00000541864 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
SLC12A4-204ENST00000541864 LOC105371045A0A1W2PR82 267 aa18.83■□□□□ 0.61
SLC12A4-204ENST00000541864 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
SLC12A4-204ENST00000541864 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
SLC12A4-204ENST00000541864 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.57
SLC12A4-204ENST00000541864 PPARGC1BQ86YN6 1023 aaKnown RBP18.53■□□□□ 0.56
SLC12A4-204ENST00000541864 HRCP23327 699 aa18.52■□□□□ 0.56
SLC12A4-204ENST00000541864 NACADO15069 1562 aa18.46■□□□□ 0.55
SLC12A4-204ENST00000541864 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
SLC12A4-204ENST00000541864 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
SLC12A4-204ENST00000541864 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
SLC12A4-204ENST00000541864 TRIM26Q12899 539 aaPredicted RBP18.28■□□□□ 0.52
SLC12A4-204ENST00000541864 PELP1Q8IZL8 1130 aaKnown RBP18.25■□□□□ 0.51
SLC12A4-204ENST00000541864 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
SLC12A4-204ENST00000541864 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.518e-7■■□□□ 11.4
SLC12A4-204ENST00000541864 WIZO95785 1651 aa18.2■□□□□ 0.5
SLC12A4-204ENST00000541864 MYT1Q01538 1121 aa18.1■□□□□ 0.49
SLC12A4-204ENST00000541864 BAZ1AQ9NRL2 1556 aaPredicted RBP18.05■□□□□ 0.48
SLC12A4-204ENST00000541864 UBTFP17480 764 aaKnown RBP17.97■□□□□ 0.47
SLC12A4-204ENST00000541864 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
SLC12A4-204ENST00000541864 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
SLC12A4-204ENST00000541864 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
SLC12A4-204ENST00000541864 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
SLC12A4-204ENST00000541864 TOP2AP11388 1531 aaKnown RBP17.84■□□□□ 0.45
SLC12A4-204ENST00000541864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
SLC12A4-204ENST00000541864 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
SLC12A4-204ENST00000541864 UNC13AQ9UPW8 1703 aa17.8■□□□□ 0.44
SLC12A4-204ENST00000541864 SMARCA2P51531 1590 aa17.75■□□□□ 0.43
SLC12A4-204ENST00000541864 SOGA1O94964 1423 aa17.73■□□□□ 0.43
SLC12A4-204ENST00000541864 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
SLC12A4-204ENST00000541864 APLP2Q06481 763 aa17.7■□□□□ 0.42
SLC12A4-204ENST00000541864 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
SLC12A4-204ENST00000541864 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
SLC12A4-204ENST00000541864 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
SLC12A4-204ENST00000541864 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
SLC12A4-204ENST00000541864 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
SLC12A4-204ENST00000541864 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
SLC12A4-204ENST00000541864 BAZ1BQ9UIG0 1483 aaKnown RBP17.55■□□□□ 0.4
SLC12A4-204ENST00000541864 YTHDC1Q96MU7 727 aaKnown RBP17.52■□□□□ 0.4
SLC12A4-204ENST00000541864 TNIKQ9UKE5 1360 aa17.52■□□□□ 0.4
SLC12A4-204ENST00000541864 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.39
SLC12A4-204ENST00000541864 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.39
SLC12A4-204ENST00000541864 EEA1Q15075 1411 aa17.49■□□□□ 0.39
SLC12A4-204ENST00000541864 ITGAEP38570 1179 aa17.46■□□□□ 0.39
SLC12A4-204ENST00000541864 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
SLC12A4-204ENST00000541864 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
SLC12A4-204ENST00000541864 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
SLC12A4-204ENST00000541864 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
SLC12A4-204ENST00000541864 CLIP1P30622 1438 aa17.33■□□□□ 0.37
SLC12A4-204ENST00000541864 RAPGEF2Q9Y4G8 1499 aa17.26■□□□□ 0.35
SLC12A4-204ENST00000541864 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
SLC12A4-204ENST00000541864 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
SLC12A4-204ENST00000541864 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
SLC12A4-204ENST00000541864 KIF21BO75037 1637 aa17.15■□□□□ 0.34
SLC12A4-204ENST00000541864 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
SLC12A4-204ENST00000541864 P3H3Q8IVL6 736 aa17.11■□□□□ 0.33
SLC12A4-204ENST00000541864 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
SLC12A4-204ENST00000541864 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
SLC12A4-204ENST00000541864 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
SLC12A4-204ENST00000541864 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
SLC12A4-204ENST00000541864 CUX1P39880 1505 aa17.04■□□□□ 0.32
SLC12A4-204ENST00000541864 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
SLC12A4-204ENST00000541864 KANK4Q5T7N3 995 aaPredicted RBP17.03■□□□□ 0.32
SLC12A4-204ENST00000541864 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
SLC12A4-204ENST00000541864 CFTRP13569 1480 aa16.99■□□□□ 0.31
SLC12A4-204ENST00000541864 PRXQ9BXM0 1461 aa16.97■□□□□ 0.31
SLC12A4-204ENST00000541864 CUX2O14529 1486 aa16.97■□□□□ 0.31
SLC12A4-204ENST00000541864 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
SLC12A4-204ENST00000541864 FAM50AQ14320 339 aaKnown RBP16.96■□□□□ 0.31
SLC12A4-204ENST00000541864 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
SLC12A4-204ENST00000541864 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
SLC12A4-204ENST00000541864 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
SLC12A4-204ENST00000541864 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
SLC12A4-204ENST00000541864 ERICH3Q5RHP9 1530 aa16.9■□□□□ 0.3
SLC12A4-204ENST00000541864 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
SLC12A4-204ENST00000541864 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
SLC12A4-204ENST00000541864 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
SLC12A4-204ENST00000541864 IGF1RP08069 1367 aa16.86■□□□□ 0.29
SLC12A4-204ENST00000541864 MIER1Q8N108 512 aa16.84■□□□□ 0.29
SLC12A4-204ENST00000541864 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
SLC12A4-204ENST00000541864 CNGB1Q14028 1251 aaPredicted RBP16.83■□□□□ 0.28
SLC12A4-204ENST00000541864 ARHGAP35Q9NRY4 1499 aa16.81■□□□□ 0.28
SLC12A4-204ENST00000541864 CC2D2AQ9P2K1 1620 aa16.8■□□□□ 0.28
SLC12A4-204ENST00000541864 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.28
SLC12A4-204ENST00000541864 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.27
SLC12A4-204ENST00000541864 DHX57Q6P158 1386 aaKnown RBP16.74■□□□□ 0.27
SLC12A4-204ENST00000541864 RAD54L2Q9Y4B4 1467 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms