Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.31e-46■□□□□ 9.6
DDX3XO00571 IGF2BP1-206ENST00000515586 768 ntTSL 314.33□□□□□ -0.123e-23■□□□□ 9.6
DDX3XO00571 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.861e-12■□□□□ 9.6
DDX3XO00571 DHFR-205ENST00000511032 1474 ntTSL 2 BASIC11.42□□□□□ -0.581e-12■□□□□ 9.6
DDX3XO00571 DHFR-206ENST00000513048 994 ntTSL 1 (best)10.03□□□□□ -0.81e-12■□□□□ 9.6
DDX3XO00571 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC8.85□□□□□ -0.991e-12■□□□□ 9.6
DDX3XO00571 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.442e-7■□□□□ 9.6
DDX3XO00571 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.08■□□□□ 0.325e-12■□□□□ 9.6
DDX3XO00571 DDX10-208ENST00000534774 518 ntTSL 213.28□□□□□ -0.283e-6■□□□□ 9.6
DDX3XO00571 DDX10-201ENST00000322536 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.533e-6■□□□□ 9.6
DDX3XO00571 RAB7A-206ENST00000490093 359 ntTSL 511.15□□□□□ -0.625e-12■□□□□ 9.6
DDX3XO00571 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC9.63□□□□□ -0.873e-6■□□□□ 9.6
DDX3XO00571 RAB7A-202ENST00000464496 576 ntTSL 28.49□□□□□ -1.055e-12■□□□□ 9.6
DDX3XO00571 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.72□□□□□ -1.335e-12■□□□□ 9.6
DDX3XO00571 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.61□□□□□ -1.355e-12■□□□□ 9.6
DDX3XO00571 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.09■■□□□ 1.459e-11■□□□□ 9.6
DDX3XO00571 IRF3-220ENST00000598108 1118 ntTSL 323.56■■□□□ 1.369e-11■□□□□ 9.6
DDX3XO00571 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.95■□□□□ 0.949e-11■□□□□ 9.6
DDX3XO00571 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.719e-11■□□□□ 9.6
DDX3XO00571 IRF3-205ENST00000593337 633 ntTSL 319.17■□□□□ 0.669e-11■□□□□ 9.6
DDX3XO00571 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.08■□□□□ 0.649e-11■□□□□ 9.6
DDX3XO00571 IRF3-216ENST00000597180 301 ntTSL 518.81■□□□□ 0.69e-11■□□□□ 9.6
DDX3XO00571 IRF3-209ENST00000595034 739 ntTSL 318.61■□□□□ 0.579e-11■□□□□ 9.6
DDX3XO00571 NUPL2-207ENST00000485250 2010 ntTSL 518.42■□□□□ 0.549e-11■□□□□ 9.6
DDX3XO00571 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.15■□□□□ 0.59e-11■□□□□ 9.6
DDX3XO00571 IRF3-230ENST00000601809 768 ntTSL 218.03■□□□□ 0.489e-11■□□□□ 9.6
DDX3XO00571 IRF3-208ENST00000594387 800 ntTSL 317.73■□□□□ 0.439e-11■□□□□ 9.6
DDX3XO00571 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.339e-11■□□□□ 9.6
DDX3XO00571 IRF3-219ENST00000597636 2874 ntTSL 516.84■□□□□ 0.299e-11■□□□□ 9.6
DDX3XO00571 IRF3-226ENST00000600453 700 ntTSL 315.91■□□□□ 0.149e-11■□□□□ 9.6
DDX3XO00571 IRF3-229ENST00000601373 680 ntTSL 214.69□□□□□ -0.069e-11■□□□□ 9.6
DDX3XO00571 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.59□□□□□ -0.079e-11■□□□□ 9.6
DDX3XO00571 NUPL2-203ENST00000413919 1329 ntTSL 314.32□□□□□ -0.129e-11■□□□□ 9.6
DDX3XO00571 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.06□□□□□ -0.169e-11■□□□□ 9.6
DDX3XO00571 NUPL2-211ENST00000497500 739 ntTSL 214.06□□□□□ -0.169e-11■□□□□ 9.6
DDX3XO00571 NUPL2-201ENST00000258742 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.189e-11■□□□□ 9.6
DDX3XO00571 NUPL2-205ENST00000438012 1653 ntTSL 213.78□□□□□ -0.29e-11■□□□□ 9.6
DDX3XO00571 IRF3-206ENST00000593818 924 ntTSL 212.9□□□□□ -0.349e-11■□□□□ 9.6
DDX3XO00571 NUPL2-204ENST00000437140 1285 ntTSL 512.33□□□□□ -0.449e-11■□□□□ 9.6
DDX3XO00571 NUPL2-209ENST00000487595 623 ntTSL 311.95□□□□□ -0.59e-11■□□□□ 9.6
DDX3XO00571 TTC3-218ENST00000484047 1945 ntTSL 210.66□□□□□ -0.79e-11■□□□□ 9.6
DDX3XO00571 ADSL-223ENST00000638161 668 ntTSL 510.05□□□□□ -0.89e-11■□□□□ 9.6
DDX3XO00571 CHMP2A-205ENST00000600006 766 ntTSL 28.19□□□□□ -1.19e-11■□□□□ 9.6
DDX3XO00571 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.319e-11■□□□□ 9.6
DDX3XO00571 ADSL-217ENST00000636124 280 ntTSL 55.92□□□□□ -1.469e-11■□□□□ 9.6
DDX3XO00571 DSCR3-210ENST00000492514 318 ntTSL 33.51□□□□□ -1.851e-6■□□□□ 9.6
DDX3XO00571 VTN-202ENST00000539746 609 ntTSL 212.49□□□□□ -0.411e-8■□□□□ 9.6
DDX3XO00571 AC002094.3-201ENST00000555059 851 ntAPPRIS P1 TSL 4 BASIC10.78□□□□□ -0.681e-8■□□□□ 9.6
DDX3XO00571 TXNDC11-209ENST00000576969 863 ntTSL 38.11□□□□□ -1.116e-11■□□□□ 9.6
DDX3XO00571 CCT8-209ENST00000494296 514 ntTSL 312.3□□□□□ -0.441e-52■□□□□ 9.6
DDX3XO00571 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC9.4□□□□□ -0.91e-52■□□□□ 9.6
DDX3XO00571 CCT8-207ENST00000481059 879 ntTSL 56.64□□□□□ -1.351e-52■□□□□ 9.6
DDX3XO00571 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.491e-17■□□□□ 9.6
DDX3XO00571 SPP1-211ENST00000614857 1558 ntTSL 2 BASIC10.8□□□□□ -0.681e-17■□□□□ 9.6
DDX3XO00571 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.891e-17■□□□□ 9.6
DDX3XO00571 SPP1-204ENST00000504310 557 ntTSL 39.02□□□□□ -0.971e-17■□□□□ 9.6
DDX3XO00571 SPP1-207ENST00000508233 825 ntTSL 28.25□□□□□ -1.091e-17■□□□□ 9.6
DDX3XO00571 SPP1-209ENST00000509659 1664 ntTSL 1 (best)7.96□□□□□ -1.131e-17■□□□□ 9.6
DDX3XO00571 SPP1-210ENST00000513981 719 ntTSL 36.91□□□□□ -1.31e-17■□□□□ 9.6
DDX3XO00571 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.7□□□□□ -1.341e-17■□□□□ 9.6
DDX3XO00571 SPP1-206ENST00000508002 568 ntTSL 1 (best)6.09□□□□□ -1.431e-17■□□□□ 9.6
DDX3XO00571 SPP1-208ENST00000509334 760 ntTSL 55.53□□□□□ -1.521e-17■□□□□ 9.6
DDX3XO00571 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.295e-23■□□□□ 9.6
DDX3XO00571 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.05■□□□□ 0.645e-23■□□□□ 9.6
DDX3XO00571 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18■□□□□ 0.475e-23■□□□□ 9.6
DDX3XO00571 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.97□□□□□ -0.175e-23■□□□□ 9.6
DDX3XO00571 SLC7A1-202ENST00000450494 547 ntTSL 217.27■□□□□ 0.361e-12■□□□□ 9.6
DDX3XO00571 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.782e-6■□□□□ 9.6
DDX3XO00571 SPNS1-205ENST00000561868 441 ntTSL 516.17■□□□□ 0.182e-6■□□□□ 9.6
DDX3XO00571 NRSN2-207ENST00000608875 941 ntTSL 313.22□□□□□ -0.299e-8■□□□□ 9.6
DDX3XO00571 PPIP5K2-208ENST00000507921 1516 ntTSL 29.97□□□□□ -0.814e-12■□□□□ 9.6
DDX3XO00571 PPIP5K2-206ENST00000504275 479 ntTSL 39.77□□□□□ -0.854e-12■□□□□ 9.6
DDX3XO00571 PPIP5K2-214ENST00000515845 505 ntTSL 39.63□□□□□ -0.874e-12■□□□□ 9.6
DDX3XO00571 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.014e-12■□□□□ 9.6
DDX3XO00571 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.774e-12■□□□□ 9.6
DDX3XO00571 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.784e-12■□□□□ 9.6
DDX3XO00571 CNOT1-208ENST00000565697 385 ntTSL 310.14□□□□□ -0.795e-9■□□□□ 9.6
DDX3XO00571 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.177e-10■□□□□ 9.6
DDX3XO00571 CUL4A-210ENST00000494985 292 ntTSL 523.84■■□□□ 1.417e-10■□□□□ 9.6
DDX3XO00571 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.45■■□□□ 1.347e-10■□□□□ 9.6
DDX3XO00571 CUL4A-208ENST00000474116 866 ntTSL 217.05■□□□□ 0.327e-10■□□□□ 9.6
DDX3XO00571 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.42□□□□□ -0.17e-10■□□□□ 9.6
DDX3XO00571 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC14.15□□□□□ -0.147e-10■□□□□ 9.6
DDX3XO00571 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC11.57□□□□□ -0.567e-10■□□□□ 9.6
DDX3XO00571 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC10.63□□□□□ -0.717e-10■□□□□ 9.6
DDX3XO00571 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.991e-68■□□□□ 9.6
DDX3XO00571 GDF15-203ENST00000595973 890 ntTSL 519.1■□□□□ 0.651e-68■□□□□ 9.6
DDX3XO00571 SMAD2-208ENST00000587269 1042 ntTSL 329.83■■■□□ 2.372e-7■□□□□ 9.6
DDX3XO00571 DNAJB2-203ENST00000392087 823 ntTSL 528.77■■■□□ 2.24e-14■□□□□ 9.6
DDX3XO00571 DNAJB2-204ENST00000421532 585 ntTSL 228.73■■■□□ 2.194e-14■□□□□ 9.6
DDX3XO00571 DNAJB2-216ENST00000482988 523 ntTSL 228.73■■■□□ 2.194e-14■□□□□ 9.6
DDX3XO00571 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.03■■■□□ 2.082e-7■□□□□ 9.6
DDX3XO00571 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.864e-14■□□□□ 9.6
DDX3XO00571 DNAJB2-214ENST00000480537 1139 ntTSL 225.41■■□□□ 1.664e-14■□□□□ 9.6
DDX3XO00571 DNAJB2-207ENST00000442681 686 ntTSL 322.04■■□□□ 1.124e-14■□□□□ 9.6
DDX3XO00571 ARL6IP6-205ENST00000495469 1308 ntTSL 221.39■■□□□ 1.014e-14■□□□□ 9.6
DDX3XO00571 TRIM47-204ENST00000587339 1907 ntTSL 1 (best)21.39■■□□□ 1.012e-7■□□□□ 9.6
DDX3XO00571 ZFYVE21-204ENST00000553724 2816 ntTSL 221.36■■□□□ 1.012e-7■□□□□ 9.6
DDX3XO00571 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.019e-7■□□□□ 9.6
DDX3XO00571 SLC7A6-208ENST00000564708 547 ntTSL 320.85■□□□□ 0.934e-14■□□□□ 9.6
Retrieved 100 of 47,714 protein–RNA pairs in 1375.6 ms