RNA–Protein interactions for RNA: ENST00000451881.5

CUL4A-204, Transcript of cullin 4A, humanhuman

TSL 5 BASIC

Gene CUL4A, Length 3,724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-204ENST00000451881 NISCHQ9Y2I1 1504 aa28.8■■■□□ 2.2
CUL4A-204ENST00000451881 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
CUL4A-204ENST00000451881 SHROOM4Q9ULL8 1493 aa24.98■■□□□ 1.59
CUL4A-204ENST00000451881 ABCC9O60706 1549 aa24.44■■□□□ 1.5
CUL4A-204ENST00000451881 CCDC180Q9P1Z9 1646 aa24.44■■□□□ 1.5
CUL4A-204ENST00000451881 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.46
CUL4A-204ENST00000451881 ZCCHC6Q5VYS8 1495 aaKnown RBP24.05■■□□□ 1.44
CUL4A-204ENST00000451881 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.36
CUL4A-204ENST00000451881 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
CUL4A-204ENST00000451881 DCAF1Q9Y4B6 1507 aa23.19■■□□□ 1.3
CUL4A-204ENST00000451881 NACADO15069 1562 aa23.1■■□□□ 1.29
CUL4A-204ENST00000451881 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
CUL4A-204ENST00000451881 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
CUL4A-204ENST00000451881 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
CUL4A-204ENST00000451881 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
CUL4A-204ENST00000451881 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
CUL4A-204ENST00000451881 FAM9AQ8IZU1 332 aaPredicted RBP22.58■■□□□ 1.2
CUL4A-204ENST00000451881 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
CUL4A-204ENST00000451881 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
CUL4A-204ENST00000451881 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
CUL4A-204ENST00000451881 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
CUL4A-204ENST00000451881 WIZO95785 1651 aa22.28■■□□□ 1.16
CUL4A-204ENST00000451881 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
CUL4A-204ENST00000451881 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
CUL4A-204ENST00000451881 BAZ1AQ9NRL2 1556 aaPredicted RBP22.2■■□□□ 1.14
CUL4A-204ENST00000451881 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
CUL4A-204ENST00000451881 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
CUL4A-204ENST00000451881 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
CUL4A-204ENST00000451881 RANGAP1P46060 587 aaPredicted RBP21.9■■□□□ 1.1
CUL4A-204ENST00000451881 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
CUL4A-204ENST00000451881 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
CUL4A-204ENST00000451881 EIF4G1Q04637 1599 aaKnown RBP21.8■■□□□ 1.08
CUL4A-204ENST00000451881 TOP2AP11388 1531 aaKnown RBP21.76■■□□□ 1.07
CUL4A-204ENST00000451881 TTBK1Q5TCY1 1321 aaPredicted RBP21.71■■□□□ 1.07
CUL4A-204ENST00000451881 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
CUL4A-204ENST00000451881 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
CUL4A-204ENST00000451881 PPARGC1BQ86YN6 1023 aaKnown RBP21.66■■□□□ 1.06
CUL4A-204ENST00000451881 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.06
CUL4A-204ENST00000451881 CC2D2AQ9P2K1 1620 aa21.54■■□□□ 1.04
CUL4A-204ENST00000451881 NCAPD3P42695 1498 aa21.49■■□□□ 1.03
CUL4A-204ENST00000451881 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.021e-6■■■■■ 58.5
CUL4A-204ENST00000451881 SOGA1O94964 1423 aa21.4■■□□□ 1.02
CUL4A-204ENST00000451881 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.02
CUL4A-204ENST00000451881 CSRNP3Q8WYN3 585 aa21.37■■□□□ 1.01
CUL4A-204ENST00000451881 NESP48681 1621 aa21.34■■□□□ 1.01
CUL4A-204ENST00000451881 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
CUL4A-204ENST00000451881 RUSC2Q8N2Y8 1516 aa21.31■■□□□ 1
CUL4A-204ENST00000451881 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
CUL4A-204ENST00000451881 HMGXB3Q12766 1538 aa21.22■□□□□ 0.99
CUL4A-204ENST00000451881 ATP1B4Q9UN42 357 aaPredicted RBP21.17■□□□□ 0.98
CUL4A-204ENST00000451881 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
CUL4A-204ENST00000451881 CFTRP13569 1480 aa21.1■□□□□ 0.97
CUL4A-204ENST00000451881 P3H3Q8IVL6 736 aa21.08■□□□□ 0.97
CUL4A-204ENST00000451881 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.96
CUL4A-204ENST00000451881 FBLN2P98095 1184 aa21.04■□□□□ 0.96
CUL4A-204ENST00000451881 APLP2Q06481 763 aa20.99■□□□□ 0.95
CUL4A-204ENST00000451881 TDRD9Q8NDG6 1382 aaKnown RBP20.98■□□□□ 0.95
CUL4A-204ENST00000451881 CUX2O14529 1486 aa20.97■□□□□ 0.95
CUL4A-204ENST00000451881 ERCC6Q03468 1493 aa20.96■□□□□ 0.95
CUL4A-204ENST00000451881 CUX1P39880 1505 aa20.94■□□□□ 0.94
CUL4A-204ENST00000451881 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
CUL4A-204ENST00000451881 PDS5BQ9NTI5 1447 aa20.92■□□□□ 0.94
CUL4A-204ENST00000451881 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
CUL4A-204ENST00000451881 KIF27Q86VH2 1401 aa20.88■□□□□ 0.93
CUL4A-204ENST00000451881 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
CUL4A-204ENST00000451881 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
CUL4A-204ENST00000451881 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
CUL4A-204ENST00000451881 CEP162Q5TB80 1403 aa20.83■□□□□ 0.93
CUL4A-204ENST00000451881 TRIM26Q12899 539 aaPredicted RBP20.8■□□□□ 0.92
CUL4A-204ENST00000451881 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
CUL4A-204ENST00000451881 EEA1Q15075 1411 aa20.79■□□□□ 0.92
CUL4A-204ENST00000451881 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
CUL4A-204ENST00000451881 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
CUL4A-204ENST00000451881 CLIP1P30622 1438 aa20.72■□□□□ 0.91
CUL4A-204ENST00000451881 TNIKQ9UKE5 1360 aa20.72■□□□□ 0.91
CUL4A-204ENST00000451881 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
CUL4A-204ENST00000451881 ITGAEP38570 1179 aa20.7■□□□□ 0.91
CUL4A-204ENST00000451881 IGF1RP08069 1367 aa20.69■□□□□ 0.9
CUL4A-204ENST00000451881 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
CUL4A-204ENST00000451881 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
CUL4A-204ENST00000451881 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
CUL4A-204ENST00000451881 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.94e-6■■■□□ 15.2
CUL4A-204ENST00000451881 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
CUL4A-204ENST00000451881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
CUL4A-204ENST00000451881 CHMP7Q8WUX9 453 aaPredicted RBP20.62■□□□□ 0.89
CUL4A-204ENST00000451881 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
CUL4A-204ENST00000451881 DNMBPQ6XZF7 1577 aa20.53■□□□□ 0.88
CUL4A-204ENST00000451881 BIVM-ERCC5R4GMW8 1640 aa20.52■□□□□ 0.88
CUL4A-204ENST00000451881 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
CUL4A-204ENST00000451881 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
CUL4A-204ENST00000451881 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
CUL4A-204ENST00000451881 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
CUL4A-204ENST00000451881 PRXQ9BXM0 1461 aa20.45■□□□□ 0.86
CUL4A-204ENST00000451881 KANK4Q5T7N3 995 aaPredicted RBP20.44■□□□□ 0.86
CUL4A-204ENST00000451881 FAM50AQ14320 339 aaKnown RBP20.38■□□□□ 0.85
CUL4A-204ENST00000451881 FHOD3Q2V2M9 1422 aa20.37■□□□□ 0.85
CUL4A-204ENST00000451881 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
CUL4A-204ENST00000451881 KIF21BO75037 1637 aa20.34■□□□□ 0.85
CUL4A-204ENST00000451881 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
CUL4A-204ENST00000451881 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms