RNA–Protein interactions for RNA: ENST00000553724.1

ZFYVE21-204, Transcript of zinc finger FYVE-type containing 21, humanhuman

TSL 2

Gene ZFYVE21, Length 2,816 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE21-204ENST00000553724 NISCHQ9Y2I1 1504 aa40.86■■■■■ 4.13
ZFYVE21-204ENST00000553724 SHROOM4Q9ULL8 1493 aa35.42■■■■□ 3.26
ZFYVE21-204ENST00000553724 DCAF8L2P0C7V8 631 aa34.87■■■■□ 3.17
ZFYVE21-204ENST00000553724 SUPT5HO00267 1087 aaKnown RBP34.61■■■■□ 3.13
ZFYVE21-204ENST00000553724 CCDC180Q9P1Z9 1646 aa34.49■■■■□ 3.11
ZFYVE21-204ENST00000553724 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
ZFYVE21-204ENST00000553724 CHIC1Q5VXU3 224 aa33.19■■■□□ 2.9
ZFYVE21-204ENST00000553724 DCAF1Q9Y4B6 1507 aa33.16■■■□□ 2.9
ZFYVE21-204ENST00000553724 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
ZFYVE21-204ENST00000553724 ABCC9O60706 1549 aa32.93■■■□□ 2.86
ZFYVE21-204ENST00000553724 SCRIBQ14160 1630 aa32.87■■■□□ 2.85
ZFYVE21-204ENST00000553724 LOC105371045A0A1W2PR82 267 aa32.5■■■□□ 2.79
ZFYVE21-204ENST00000553724 RSF1Q96T23 1441 aaPredicted RBP32.39■■■□□ 2.78
ZFYVE21-204ENST00000553724 PCGF6Q9BYE7 350 aa32.18■■■□□ 2.74
ZFYVE21-204ENST00000553724 CECR2Q9BXF3 1484 aa32.17■■■□□ 2.74
ZFYVE21-204ENST00000553724 EHMT2Q96KQ7 1210 aa32.16■■■□□ 2.74
ZFYVE21-204ENST00000553724 FAM9AQ8IZU1 332 aaPredicted RBP32.12■■■□□ 2.73
ZFYVE21-204ENST00000553724 NACADO15069 1562 aa32.12■■■□□ 2.73
ZFYVE21-204ENST00000553724 RB1CC1Q8TDY2 1594 aa32.03■■■□□ 2.72
ZFYVE21-204ENST00000553724 TRIM41Q8WV44 630 aa32.03■■■□□ 2.72
ZFYVE21-204ENST00000553724 MROH2BQ7Z745 1585 aa31.92■■■□□ 2.7
ZFYVE21-204ENST00000553724 WIZO95785 1651 aa31.73■■■□□ 2.67
ZFYVE21-204ENST00000553724 PABPN1Q86U42 306 aaKnown RBP eCLIP31.7■■■□□ 2.66
ZFYVE21-204ENST00000553724 HRCP23327 699 aa31.66■■■□□ 2.66
ZFYVE21-204ENST00000553724 PPARGC1BQ86YN6 1023 aaKnown RBP31.49■■■□□ 2.63
ZFYVE21-204ENST00000553724 BAZ1AQ9NRL2 1556 aaPredicted RBP31.34■■■□□ 2.61
ZFYVE21-204ENST00000553724 TRIM26Q12899 539 aaPredicted RBP31.28■■■□□ 2.6
ZFYVE21-204ENST00000553724 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
ZFYVE21-204ENST00000553724 SMARCA4P51532 1647 aa31.14■■■□□ 2.58
ZFYVE21-204ENST00000553724 CCDC88BA6NC98 1476 aa31.1■■■□□ 2.57
ZFYVE21-204ENST00000553724 ABCC8Q09428 1581 aa31.08■■■□□ 2.57
ZFYVE21-204ENST00000553724 TOP2AP11388 1531 aaKnown RBP31.01■■■□□ 2.55
ZFYVE21-204ENST00000553724 TTBK1Q5TCY1 1321 aaPredicted RBP30.97■■■□□ 2.55
ZFYVE21-204ENST00000553724 BICRAQ9NZM4 1560 aa30.95■■■□□ 2.55
ZFYVE21-204ENST00000553724 SMARCA2P51531 1590 aa30.91■■■□□ 2.54
ZFYVE21-204ENST00000553724 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
ZFYVE21-204ENST00000553724 SOGA1O94964 1423 aa30.78■■■□□ 2.52
ZFYVE21-204ENST00000553724 RUSC2Q8N2Y8 1516 aa30.67■■■□□ 2.5
ZFYVE21-204ENST00000553724 UBTFP17480 764 aaKnown RBP30.65■■■□□ 2.5
ZFYVE21-204ENST00000553724 CSRNP3Q8WYN3 585 aa30.54■■■□□ 2.48
ZFYVE21-204ENST00000553724 RANGAP1P46060 587 aaPredicted RBP30.52■■■□□ 2.48
ZFYVE21-204ENST00000553724 ATAD2BQ9ULI0 1458 aa30.51■■■□□ 2.47
ZFYVE21-204ENST00000553724 BAZ1BQ9UIG0 1483 aaKnown RBP30.47■■■□□ 2.47
ZFYVE21-204ENST00000553724 WRNQ14191 1432 aaPredicted RBP eCLIP30.46■■■□□ 2.47
ZFYVE21-204ENST00000553724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.44■■■□□ 2.46
ZFYVE21-204ENST00000553724 CEP162Q5TB80 1403 aa30.4■■■□□ 2.46
ZFYVE21-204ENST00000553724 PEG3Q9GZU2 1588 aa30.31■■■□□ 2.44
ZFYVE21-204ENST00000553724 ZEB1P37275 1124 aaPredicted RBP30.27■■■□□ 2.44
ZFYVE21-204ENST00000553724 SYNJ1O43426 1573 aa30.26■■■□□ 2.44
ZFYVE21-204ENST00000553724 CCER1Q8TC90 406 aaPredicted RBP30.23■■■□□ 2.43
ZFYVE21-204ENST00000553724 TNIKQ9UKE5 1360 aa30.22■■■□□ 2.43
ZFYVE21-204ENST00000553724 EEA1Q15075 1411 aa30.11■■■□□ 2.41
ZFYVE21-204ENST00000553724 GOLGA3Q08378 1498 aa30.1■■■□□ 2.41
ZFYVE21-204ENST00000553724 RAPGEF2Q9Y4G8 1499 aa29.96■■■□□ 2.39
ZFYVE21-204ENST00000553724 CEP164Q9UPV0 1460 aa29.93■■■□□ 2.38
ZFYVE21-204ENST00000553724 HNRNPUL2Q1KMD3 747 aaKnown RBP29.92■■■□□ 2.38
ZFYVE21-204ENST00000553724 CLIP1P30622 1438 aa29.9■■■□□ 2.38
ZFYVE21-204ENST00000553724 NCAPD3P42695 1498 aa29.84■■■□□ 2.37
ZFYVE21-204ENST00000553724 APLP2Q06481 763 aa29.8■■■□□ 2.36
ZFYVE21-204ENST00000553724 TOP2BQ02880 1626 aa29.74■■■□□ 2.35
ZFYVE21-204ENST00000553724 KIF21BO75037 1637 aa29.71■■■□□ 2.35
ZFYVE21-204ENST00000553724 CUX1P39880 1505 aa29.68■■■□□ 2.34
ZFYVE21-204ENST00000553724 HMGXB3Q12766 1538 aa29.68■■■□□ 2.34
ZFYVE21-204ENST00000553724 VPS8Q8N3P4 1428 aa29.61■■■□□ 2.33
ZFYVE21-204ENST00000553724 CFTRP13569 1480 aa29.58■■■□□ 2.33
ZFYVE21-204ENST00000553724 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
ZFYVE21-204ENST00000553724 KIF27Q86VH2 1401 aa29.5■■■□□ 2.31
ZFYVE21-204ENST00000553724 KANK4Q5T7N3 995 aaPredicted RBP29.49■■■□□ 2.31
ZFYVE21-204ENST00000553724 PRXQ9BXM0 1461 aa29.47■■■□□ 2.31
ZFYVE21-204ENST00000553724 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
ZFYVE21-204ENST00000553724 CUX2O14529 1486 aa29.4■■■□□ 2.3
ZFYVE21-204ENST00000553724 DIEXFQ68CQ4 756 aaKnown RBP29.39■■■□□ 2.3
ZFYVE21-204ENST00000553724 ITGAEP38570 1179 aa29.37■■■□□ 2.29
ZFYVE21-204ENST00000553724 CC2D2AQ9P2K1 1620 aa29.37■■■□□ 2.29
ZFYVE21-204ENST00000553724 P3H3Q8IVL6 736 aa29.36■■■□□ 2.29
ZFYVE21-204ENST00000553724 ARAP1Q96P48 1450 aa29.35■■■□□ 2.29
ZFYVE21-204ENST00000553724 ATP1B4Q9UN42 357 aaPredicted RBP29.3■■■□□ 2.28
ZFYVE21-204ENST00000553724 DNAJC5BQ9UF47 199 aa29.3■■■□□ 2.28
ZFYVE21-204ENST00000553724 IGF1RP08069 1367 aa29.27■■■□□ 2.28
ZFYVE21-204ENST00000553724 ERICH3Q5RHP9 1530 aa29.27■■■□□ 2.28
ZFYVE21-204ENST00000553724 NESP48681 1621 aa29.25■■■□□ 2.27
ZFYVE21-204ENST00000553724 FGD5Q6ZNL6 1462 aa29.25■■■□□ 2.27
ZFYVE21-204ENST00000553724 CARMIL1Q5VZK9 1371 aa29.18■■■□□ 2.26
ZFYVE21-204ENST00000553724 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
ZFYVE21-204ENST00000553724 ARHGAP35Q9NRY4 1499 aa29.16■■■□□ 2.26
ZFYVE21-204ENST00000553724 RAD54L2Q9Y4B4 1467 aa29.15■■■□□ 2.26
ZFYVE21-204ENST00000553724 SCAF1Q9H7N4 1312 aaKnown RBP29.15■■■□□ 2.26
ZFYVE21-204ENST00000553724 ZNF316A6NFI3 1004 aaPredicted RBP29.14■■■□□ 2.26
ZFYVE21-204ENST00000553724 YTHDC1Q96MU7 727 aaKnown RBP29.04■■■□□ 2.24
ZFYVE21-204ENST00000553724 NEUROD1Q13562 356 aa29.02■■■□□ 2.24
ZFYVE21-204ENST00000553724 PRDM2Q13029 1718 aa28.96■■■□□ 2.23
ZFYVE21-204ENST00000553724 FAM50AQ14320 339 aaKnown RBP28.92■■■□□ 2.22
ZFYVE21-204ENST00000553724 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
ZFYVE21-204ENST00000553724 POLA1P09884 1462 aaPredicted RBP28.91■■■□□ 2.22
ZFYVE21-204ENST00000553724 CCNB3Q8WWL7 1395 aa28.89■■■□□ 2.22
ZFYVE21-204ENST00000553724 TOPBP1Q92547 1522 aa28.89■■■□□ 2.22
ZFYVE21-204ENST00000553724 DHX57Q6P158 1386 aaKnown RBP28.88■■■□□ 2.21
ZFYVE21-204ENST00000553724 MIER1Q8N108 512 aa28.87■■■□□ 2.21
ZFYVE21-204ENST00000553724 FHOD3Q2V2M9 1422 aa28.86■■■□□ 2.21
ZFYVE21-204ENST00000553724 ACIN1Q9UKV3 1341 aaKnown RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 3165.9 ms