RNA–Protein interactions for RNA: ENST00000360804.4

SPP1-202, Transcript of secreted phosphoprotein 1, humanhuman

TSL 1 (best) BASIC

Gene SPP1, Length 1,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPP1-202ENST00000360804 NISCHQ9Y2I1 1504 aa15.91■□□□□ 0.14
SPP1-202ENST00000360804 AEBP2Q6ZN18 517 aaPredicted RBP15.22■□□□□ 0.03
SPP1-202ENST00000360804 CHIC1Q5VXU3 224 aa14.64□□□□□ -0.07
SPP1-202ENST00000360804 CCDC180Q9P1Z9 1646 aa14.17□□□□□ -0.14
SPP1-202ENST00000360804 ABCC9O60706 1549 aa14□□□□□ -0.17
SPP1-202ENST00000360804 DCAF8L2P0C7V8 631 aa13.42□□□□□ -0.26
SPP1-202ENST00000360804 RB1CC1Q8TDY2 1594 aa13.39□□□□□ -0.27
SPP1-202ENST00000360804 NACADO15069 1562 aa13.34□□□□□ -0.27
SPP1-202ENST00000360804 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
SPP1-202ENST00000360804 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
SPP1-202ENST00000360804 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
SPP1-202ENST00000360804 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
SPP1-202ENST00000360804 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPP1-202ENST00000360804 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
SPP1-202ENST00000360804 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
SPP1-202ENST00000360804 BICRAQ9NZM4 1560 aa12.98□□□□□ -0.33
SPP1-202ENST00000360804 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
SPP1-202ENST00000360804 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
SPP1-202ENST00000360804 SHROOM4Q9ULL8 1493 aa12.79□□□□□ -0.36
SPP1-202ENST00000360804 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
SPP1-202ENST00000360804 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
SPP1-202ENST00000360804 CECR2Q9BXF3 1484 aa12.56□□□□□ -0.4
SPP1-202ENST00000360804 SMARCA4P51532 1647 aa12.37□□□□□ -0.43
SPP1-202ENST00000360804 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
SPP1-202ENST00000360804 ATAD2BQ9ULI0 1458 aa12.32□□□□□ -0.44
SPP1-202ENST00000360804 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
SPP1-202ENST00000360804 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
SPP1-202ENST00000360804 MROH2BQ7Z745 1585 aa12.27□□□□□ -0.44
SPP1-202ENST00000360804 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
SPP1-202ENST00000360804 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
SPP1-202ENST00000360804 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.46
SPP1-202ENST00000360804 WIZO95785 1651 aa12.16□□□□□ -0.46
SPP1-202ENST00000360804 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
SPP1-202ENST00000360804 FOXD1Q16676 465 aa12.09□□□□□ -0.47
SPP1-202ENST00000360804 NESP48681 1621 aa12.08□□□□□ -0.48
SPP1-202ENST00000360804 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
SPP1-202ENST00000360804 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
SPP1-202ENST00000360804 TOP2AP11388 1531 aaKnown RBP12□□□□□ -0.49
SPP1-202ENST00000360804 CADPSQ9ULU8 1353 aa11.96□□□□□ -0.49
SPP1-202ENST00000360804 PDS5BQ9NTI5 1447 aa11.94□□□□□ -0.5
SPP1-202ENST00000360804 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
SPP1-202ENST00000360804 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
SPP1-202ENST00000360804 CUX2O14529 1486 aa11.93□□□□□ -0.5
SPP1-202ENST00000360804 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
SPP1-202ENST00000360804 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
SPP1-202ENST00000360804 CFTRP13569 1480 aa11.86□□□□□ -0.51
SPP1-202ENST00000360804 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
SPP1-202ENST00000360804 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
SPP1-202ENST00000360804 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
SPP1-202ENST00000360804 SUPT5HO00267 1087 aaKnown RBP11.8□□□□□ -0.52
SPP1-202ENST00000360804 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
SPP1-202ENST00000360804 WDR62O43379 1518 aa11.78□□□□□ -0.52
SPP1-202ENST00000360804 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
SPP1-202ENST00000360804 DNAJC5Q9H3Z4 198 aa11.65□□□□□ -0.54
SPP1-202ENST00000360804 TOPBP1Q92547 1522 aa11.64□□□□□ -0.55
SPP1-202ENST00000360804 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
SPP1-202ENST00000360804 ABCC8Q09428 1581 aa11.6□□□□□ -0.55
SPP1-202ENST00000360804 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
SPP1-202ENST00000360804 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
SPP1-202ENST00000360804 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.56
SPP1-202ENST00000360804 CUX1P39880 1505 aa11.52□□□□□ -0.57
SPP1-202ENST00000360804 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
SPP1-202ENST00000360804 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
SPP1-202ENST00000360804 TARBP1Q13395 1621 aaKnown RBP11.5□□□□□ -0.57
SPP1-202ENST00000360804 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
SPP1-202ENST00000360804 SOGA1O94964 1423 aa11.49□□□□□ -0.57
SPP1-202ENST00000360804 AQRO60306 1485 aaKnown RBP eCLIP11.48□□□□□ -0.57
SPP1-202ENST00000360804 TDRD9Q8NDG6 1382 aaKnown RBP11.45□□□□□ -0.58
SPP1-202ENST00000360804 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
SPP1-202ENST00000360804 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
SPP1-202ENST00000360804 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
SPP1-202ENST00000360804 WDR97A6NE52 1622 aa11.39□□□□□ -0.59
SPP1-202ENST00000360804 TOP2BQ02880 1626 aa11.39□□□□□ -0.59
SPP1-202ENST00000360804 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
SPP1-202ENST00000360804 FBLN2P98095 1184 aa11.39□□□□□ -0.59
SPP1-202ENST00000360804 CHD1O14646 1710 aa11.38□□□□□ -0.59
SPP1-202ENST00000360804 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
SPP1-202ENST00000360804 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
SPP1-202ENST00000360804 GAPVD1Q14C86 1478 aa11.36□□□□□ -0.59
SPP1-202ENST00000360804 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
SPP1-202ENST00000360804 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
SPP1-202ENST00000360804 PPP6R1Q9UPN7 881 aa11.33□□□□□ -0.6
SPP1-202ENST00000360804 ABCA5Q8WWZ7 1642 aa11.33□□□□□ -0.6
SPP1-202ENST00000360804 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
SPP1-202ENST00000360804 MSH5O43196 834 aa11.32□□□□□ -0.6
SPP1-202ENST00000360804 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
SPP1-202ENST00000360804 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
SPP1-202ENST00000360804 CHMP7Q8WUX9 453 aaPredicted RBP11.31□□□□□ -0.6
SPP1-202ENST00000360804 ADRA2BP18089 450 aa11.29□□□□□ -0.6
SPP1-202ENST00000360804 SYNJ2O15056 1496 aa11.29□□□□□ -0.6
SPP1-202ENST00000360804 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.6
SPP1-202ENST00000360804 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.6
SPP1-202ENST00000360804 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.6
SPP1-202ENST00000360804 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
SPP1-202ENST00000360804 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
SPP1-202ENST00000360804 ERICH3Q5RHP9 1530 aa11.22□□□□□ -0.61
SPP1-202ENST00000360804 CLASP1Q7Z460 1538 aa11.22□□□□□ -0.61
SPP1-202ENST00000360804 GRIN2AQ12879 1464 aa11.21□□□□□ -0.61
SPP1-202ENST00000360804 FHAD1B1AJZ9 1412 aa11.21□□□□□ -0.61
SPP1-202ENST00000360804 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms