RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 NISCHQ9Y2I1 1504 aa44.37■■■■■ 4.69
CUL4A-208ENST00000474116 ABCC9O60706 1549 aa40.39■■■■■ 4.06
CUL4A-208ENST00000474116 CCDC180Q9P1Z9 1646 aa39.98■■■■□ 3.99
CUL4A-208ENST00000474116 DNAJC5BQ9UF47 199 aa38.37■■■■□ 3.73
CUL4A-208ENST00000474116 RB1CC1Q8TDY2 1594 aa38.25■■■■□ 3.71
CUL4A-208ENST00000474116 NACADO15069 1562 aa37.91■■■■□ 3.66
CUL4A-208ENST00000474116 DCAF8L2P0C7V8 631 aa37.59■■■■□ 3.61
CUL4A-208ENST00000474116 PABPN1Q86U42 306 aaKnown RBP eCLIP37.56■■■■□ 3.6
CUL4A-208ENST00000474116 UNC13AQ9UPW8 1703 aa37.41■■■■□ 3.58
CUL4A-208ENST00000474116 MYO15BQ96JP2 1530 aa37.28■■■■□ 3.56
CUL4A-208ENST00000474116 BICRAQ9NZM4 1560 aa37.22■■■■□ 3.55
CUL4A-208ENST00000474116 ZCCHC6Q5VYS8 1495 aaKnown RBP36.67■■■■□ 3.46
CUL4A-208ENST00000474116 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
CUL4A-208ENST00000474116 SHROOM4Q9ULL8 1493 aa36.62■■■■□ 3.45
CUL4A-208ENST00000474116 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
CUL4A-208ENST00000474116 CECR2Q9BXF3 1484 aa36.43■■■■□ 3.42
CUL4A-208ENST00000474116 SCRIBQ14160 1630 aa36.37■■■■□ 3.41
CUL4A-208ENST00000474116 EIF4G1Q04637 1599 aaKnown RBP36.3■■■■□ 3.4
CUL4A-208ENST00000474116 DNAJC5Q9H3Z4 198 aa35.52■■■■□ 3.28
CUL4A-208ENST00000474116 NCAPD3P42695 1498 aa35.03■■■■□ 3.2
CUL4A-208ENST00000474116 CUX2O14529 1486 aa35■■■■□ 3.19
CUL4A-208ENST00000474116 ERCC6Q03468 1493 aa34.86■■■■□ 3.17
CUL4A-208ENST00000474116 ATAD2BQ9ULI0 1458 aa34.85■■■■□ 3.17
CUL4A-208ENST00000474116 HMGXB3Q12766 1538 aa34.7■■■■□ 3.14
CUL4A-208ENST00000474116 SMARCA2P51531 1590 aa34.7■■■■□ 3.14
CUL4A-208ENST00000474116 SMARCA4P51532 1647 aa34.69■■■■□ 3.14
CUL4A-208ENST00000474116 NESP48681 1621 aa34.6■■■■□ 3.13
CUL4A-208ENST00000474116 BAZ1BQ9UIG0 1483 aaKnown RBP34.45■■■■□ 3.1
CUL4A-208ENST00000474116 BAZ1AQ9NRL2 1556 aaPredicted RBP34.44■■■■□ 3.1
CUL4A-208ENST00000474116 PEG3Q9GZU2 1588 aa34.38■■■■□ 3.09
CUL4A-208ENST00000474116 THOC2Q8NI27 1593 aaKnown RBP34.32■■■■□ 3.09
CUL4A-208ENST00000474116 LAMC3Q9Y6N6 1575 aa34.28■■■■□ 3.08
CUL4A-208ENST00000474116 MROH2BQ7Z745 1585 aa34.19■■■■□ 3.06
CUL4A-208ENST00000474116 KIF21AQ7Z4S6 1674 aa34.12■■■■□ 3.05
CUL4A-208ENST00000474116 PDS5BQ9NTI5 1447 aa34.09■■■■□ 3.05
CUL4A-208ENST00000474116 CADPSQ9ULU8 1353 aa33.94■■■■□ 3.02
CUL4A-208ENST00000474116 MRC2Q9UBG0 1479 aa33.82■■■■□ 3
CUL4A-208ENST00000474116 WDR62O43379 1518 aa33.77■■■■□ 3
CUL4A-208ENST00000474116 WIZO95785 1651 aa33.74■■■□□ 2.99
CUL4A-208ENST00000474116 TRIM41Q8WV44 630 aa33.71■■■□□ 2.99
CUL4A-208ENST00000474116 CEP164Q9UPV0 1460 aa33.58■■■□□ 2.97
CUL4A-208ENST00000474116 FANCD2Q9BXW9 1451 aa33.53■■■□□ 2.96
CUL4A-208ENST00000474116 CFTRP13569 1480 aa33.46■■■□□ 2.95
CUL4A-208ENST00000474116 OSCARQ8IYS5 282 aa33.34■■■□□ 2.93
CUL4A-208ENST00000474116 RSF1Q96T23 1441 aaPredicted RBP33.33■■■□□ 2.93
CUL4A-208ENST00000474116 URB2Q14146 1524 aaKnown RBP33.3■■■□□ 2.92
CUL4A-208ENST00000474116 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
CUL4A-208ENST00000474116 PRDM2Q13029 1718 aa33.04■■■□□ 2.88
CUL4A-208ENST00000474116 ZNF608Q9ULD9 1512 aaPredicted RBP32.96■■■□□ 2.87
CUL4A-208ENST00000474116 RIMBP3CA6NJZ7 1639 aa32.95■■■□□ 2.86
CUL4A-208ENST00000474116 RIMBP3BA6NNM3 1639 aa32.95■■■□□ 2.86
CUL4A-208ENST00000474116 RIMBP3Q9UFD9 1639 aa32.95■■■□□ 2.86
CUL4A-208ENST00000474116 CCDC88BA6NC98 1476 aa32.94■■■□□ 2.86
CUL4A-208ENST00000474116 IFT140Q96RY7 1462 aa32.94■■■□□ 2.86
CUL4A-208ENST00000474116 TOPBP1Q92547 1522 aa32.86■■■□□ 2.85
CUL4A-208ENST00000474116 ARHGEF11O15085 1522 aa32.79■■■□□ 2.84
CUL4A-208ENST00000474116 ABCC8Q09428 1581 aa32.75■■■□□ 2.83
CUL4A-208ENST00000474116 EIF4G3O43432 1585 aaKnown RBP32.72■■■□□ 2.83
CUL4A-208ENST00000474116 DNMBPQ6XZF7 1577 aa32.68■■■□□ 2.82
CUL4A-208ENST00000474116 TARBP1Q13395 1621 aaKnown RBP32.62■■■□□ 2.81
CUL4A-208ENST00000474116 AQRO60306 1485 aaKnown RBP eCLIP32.61■■■□□ 2.815e-8■■■□□ 17.4
CUL4A-208ENST00000474116 CYB5RLQ6IPT4 315 aa32.59■■■□□ 2.81
CUL4A-208ENST00000474116 CHD1O14646 1710 aa32.56■■■□□ 2.8
CUL4A-208ENST00000474116 POLA1P09884 1462 aaPredicted RBP32.48■■■□□ 2.79
CUL4A-208ENST00000474116 ARAP1Q96P48 1450 aa32.45■■■□□ 2.79
CUL4A-208ENST00000474116 FBLN2P98095 1184 aa32.43■■■□□ 2.78
CUL4A-208ENST00000474116 RAD54L2Q9Y4B4 1467 aa32.39■■■□□ 2.78
CUL4A-208ENST00000474116 SOGA1O94964 1423 aa32.34■■■□□ 2.77
CUL4A-208ENST00000474116 TDRD9Q8NDG6 1382 aaKnown RBP32.33■■■□□ 2.77
CUL4A-208ENST00000474116 TRHP20396 242 aaPredicted RBP32.32■■■□□ 2.76
CUL4A-208ENST00000474116 SNAPC4Q5SXM2 1469 aa32.23■■■□□ 2.75
CUL4A-208ENST00000474116 WDR97A6NE52 1622 aa32.22■■■□□ 2.75
CUL4A-208ENST00000474116 FGD5Q6ZNL6 1462 aa32.22■■■□□ 2.75
CUL4A-208ENST00000474116 CLASP1Q7Z460 1538 aa32.21■■■□□ 2.75
CUL4A-208ENST00000474116 CHMP7Q8WUX9 453 aaPredicted RBP32.14■■■□□ 2.74
CUL4A-208ENST00000474116 CUX1P39880 1505 aa32.14■■■□□ 2.74
CUL4A-208ENST00000474116 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
CUL4A-208ENST00000474116 SYNJ1O43426 1573 aa32.11■■■□□ 2.73
CUL4A-208ENST00000474116 GRIN2BQ13224 1484 aa32.1■■■□□ 2.73
CUL4A-208ENST00000474116 SYNJ2O15056 1496 aa32.04■■■□□ 2.72
CUL4A-208ENST00000474116 GAPVD1Q14C86 1478 aa31.93■■■□□ 2.7
CUL4A-208ENST00000474116 PBRM1Q86U86 1689 aa31.92■■■□□ 2.7
CUL4A-208ENST00000474116 ABCA10Q8WWZ4 1543 aa31.84■■■□□ 2.69
CUL4A-208ENST00000474116 ABCA5Q8WWZ7 1642 aa31.82■■■□□ 2.69
CUL4A-208ENST00000474116 ERCC6L2Q5T890 1561 aa31.68■■■□□ 2.66
CUL4A-208ENST00000474116 GRIN2AQ12879 1464 aa31.68■■■□□ 2.66
CUL4A-208ENST00000474116 AEBP2Q6ZN18 517 aaPredicted RBP31.67■■■□□ 2.66
CUL4A-208ENST00000474116 NUP160Q12769 1436 aa31.62■■■□□ 2.65
CUL4A-208ENST00000474116 WRNQ14191 1432 aaPredicted RBP eCLIP31.61■■■□□ 2.65
CUL4A-208ENST00000474116 ADAMTS12P58397 1594 aa31.6■■■□□ 2.65
CUL4A-208ENST00000474116 CEP170Q5SW79 1584 aa31.6■■■□□ 2.65
CUL4A-208ENST00000474116 SHROOM2Q13796 1616 aa31.53■■■□□ 2.64
CUL4A-208ENST00000474116 FHAD1B1AJZ9 1412 aa31.5■■■□□ 2.63
CUL4A-208ENST00000474116 BIVM-ERCC5R4GMW8 1640 aa31.5■■■□□ 2.63
CUL4A-208ENST00000474116 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
CUL4A-208ENST00000474116 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
CUL4A-208ENST00000474116 ERICH3Q5RHP9 1530 aa31.42■■■□□ 2.62
CUL4A-208ENST00000474116 PRG4Q92954 1404 aaPredicted RBP31.32■■■□□ 2.61
CUL4A-208ENST00000474116 KIF13AQ9H1H9 1805 aa31.32■■■□□ 2.6
CUL4A-208ENST00000474116 JPH4Q96JJ6 628 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 432.6 ms