RNA–Protein interactions for RNA: ENST00000497500.5

NUPL2-211, Transcript of nucleoporin like 2, humanhuman

TSL 2

Gene NUPL2, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUPL2-211ENST00000497500 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.07
NUPL2-211ENST00000497500 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
NUPL2-211ENST00000497500 ABCC9O60706 1549 aa30.05■■■□□ 2.4
NUPL2-211ENST00000497500 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
NUPL2-211ENST00000497500 NACADO15069 1562 aa28.76■■■□□ 2.19
NUPL2-211ENST00000497500 MYO15BQ96JP2 1530 aa28.56■■■□□ 2.16
NUPL2-211ENST00000497500 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
NUPL2-211ENST00000497500 DCAF8L2P0C7V8 631 aa28.39■■■□□ 2.14
NUPL2-211ENST00000497500 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
NUPL2-211ENST00000497500 UNC13AQ9UPW8 1703 aa28.31■■■□□ 2.12
NUPL2-211ENST00000497500 BICRAQ9NZM4 1560 aa28.06■■■□□ 2.08
NUPL2-211ENST00000497500 DNAJC5BQ9UF47 199 aa28.05■■■□□ 2.08
NUPL2-211ENST00000497500 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
NUPL2-211ENST00000497500 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
NUPL2-211ENST00000497500 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
NUPL2-211ENST00000497500 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
NUPL2-211ENST00000497500 CC2D2AQ9P2K1 1620 aa27.23■■□□□ 1.95
NUPL2-211ENST00000497500 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
NUPL2-211ENST00000497500 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
NUPL2-211ENST00000497500 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
NUPL2-211ENST00000497500 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
NUPL2-211ENST00000497500 BAZ1AQ9NRL2 1556 aaPredicted RBP26.51■■□□□ 1.83
NUPL2-211ENST00000497500 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
NUPL2-211ENST00000497500 SMARCA2P51531 1590 aa26.45■■□□□ 1.82
NUPL2-211ENST00000497500 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
NUPL2-211ENST00000497500 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
NUPL2-211ENST00000497500 MROH2BQ7Z745 1585 aa26.36■■□□□ 1.81
NUPL2-211ENST00000497500 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
NUPL2-211ENST00000497500 WIZO95785 1651 aa26.07■■□□□ 1.76
NUPL2-211ENST00000497500 DNAJC5Q9H3Z4 198 aa26■■□□□ 1.75
NUPL2-211ENST00000497500 NESP48681 1621 aa25.97■■□□□ 1.75
NUPL2-211ENST00000497500 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
NUPL2-211ENST00000497500 LAMC3Q9Y6N6 1575 aa25.88■■□□□ 1.73
NUPL2-211ENST00000497500 ERCC6Q03468 1493 aa25.87■■□□□ 1.73
NUPL2-211ENST00000497500 CUX2O14529 1486 aa25.79■■□□□ 1.72
NUPL2-211ENST00000497500 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
NUPL2-211ENST00000497500 THOC2Q8NI27 1593 aaKnown RBP25.73■■□□□ 1.71
NUPL2-211ENST00000497500 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
NUPL2-211ENST00000497500 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
NUPL2-211ENST00000497500 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
NUPL2-211ENST00000497500 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
NUPL2-211ENST00000497500 CFTRP13569 1480 aa25.54■■□□□ 1.68
NUPL2-211ENST00000497500 MRC2Q9UBG0 1479 aa25.45■■□□□ 1.66
NUPL2-211ENST00000497500 WDR62O43379 1518 aa25.43■■□□□ 1.66
NUPL2-211ENST00000497500 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
NUPL2-211ENST00000497500 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
NUPL2-211ENST00000497500 FANCD2Q9BXW9 1451 aa25.42■■□□□ 1.66
NUPL2-211ENST00000497500 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
NUPL2-211ENST00000497500 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
NUPL2-211ENST00000497500 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
NUPL2-211ENST00000497500 DNMBPQ6XZF7 1577 aa24.98■■□□□ 1.59
NUPL2-211ENST00000497500 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
NUPL2-211ENST00000497500 IFT140Q96RY7 1462 aa24.89■■□□□ 1.58
NUPL2-211ENST00000497500 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
NUPL2-211ENST00000497500 ZNF608Q9ULD9 1512 aaPredicted RBP24.83■■□□□ 1.57
NUPL2-211ENST00000497500 TARBP1Q13395 1621 aaKnown RBP24.81■■□□□ 1.56
NUPL2-211ENST00000497500 POLA1P09884 1462 aaPredicted RBP24.79■■□□□ 1.56
NUPL2-211ENST00000497500 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
NUPL2-211ENST00000497500 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
NUPL2-211ENST00000497500 CUX1P39880 1505 aa24.75■■□□□ 1.55
NUPL2-211ENST00000497500 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
NUPL2-211ENST00000497500 RAD54L2Q9Y4B4 1467 aa24.65■■□□□ 1.54
NUPL2-211ENST00000497500 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
NUPL2-211ENST00000497500 AQRO60306 1485 aaKnown RBP eCLIP24.6■■□□□ 1.538e-6■■■■□ 23.2
NUPL2-211ENST00000497500 SOGA1O94964 1423 aa24.6■■□□□ 1.53
NUPL2-211ENST00000497500 OSCARQ8IYS5 282 aa24.58■■□□□ 1.53
NUPL2-211ENST00000497500 CHD1O14646 1710 aa24.51■■□□□ 1.51
NUPL2-211ENST00000497500 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
NUPL2-211ENST00000497500 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
NUPL2-211ENST00000497500 TOP2BQ02880 1626 aa24.47■■□□□ 1.51
NUPL2-211ENST00000497500 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
NUPL2-211ENST00000497500 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.5
NUPL2-211ENST00000497500 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
NUPL2-211ENST00000497500 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
NUPL2-211ENST00000497500 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
NUPL2-211ENST00000497500 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
NUPL2-211ENST00000497500 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
NUPL2-211ENST00000497500 MAGI1Q96QZ7 1491 aaPredicted RBP24.37■■□□□ 1.49
NUPL2-211ENST00000497500 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
NUPL2-211ENST00000497500 RIMBP3CA6NJZ7 1639 aa24.33■■□□□ 1.49
NUPL2-211ENST00000497500 RIMBP3BA6NNM3 1639 aa24.33■■□□□ 1.49
NUPL2-211ENST00000497500 RIMBP3Q9UFD9 1639 aa24.33■■□□□ 1.49
NUPL2-211ENST00000497500 ARHGEF11O15085 1522 aa24.28■■□□□ 1.48
NUPL2-211ENST00000497500 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
NUPL2-211ENST00000497500 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
NUPL2-211ENST00000497500 FBLN2P98095 1184 aa24.21■■□□□ 1.47
NUPL2-211ENST00000497500 ADAMTS12P58397 1594 aa24.2■■□□□ 1.46
NUPL2-211ENST00000497500 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
NUPL2-211ENST00000497500 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
NUPL2-211ENST00000497500 GRIN2AQ12879 1464 aa24.09■■□□□ 1.45
NUPL2-211ENST00000497500 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
NUPL2-211ENST00000497500 FHAD1B1AJZ9 1412 aa24.05■■□□□ 1.44
NUPL2-211ENST00000497500 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
NUPL2-211ENST00000497500 NUP160Q12769 1436 aa24.03■■□□□ 1.44
NUPL2-211ENST00000497500 CYB5RLQ6IPT4 315 aa24■■□□□ 1.43
NUPL2-211ENST00000497500 SHROOM2Q13796 1616 aa23.93■■□□□ 1.42
NUPL2-211ENST00000497500 KIF27Q86VH2 1401 aa23.91■■□□□ 1.42
NUPL2-211ENST00000497500 CUL7Q14999 1698 aa23.89■■□□□ 1.41
NUPL2-211ENST00000497500 ERCC6L2Q5T890 1561 aa23.87■■□□□ 1.41
NUPL2-211ENST00000497500 IGF1RP08069 1367 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms