RNA–Protein interactions for RNA: ENST00000504310.5

SPP1-204, Transcript of secreted phosphoprotein 1, humanhuman

TSL 3

Gene SPP1, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPP1-204ENST00000504310 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
SPP1-204ENST00000504310 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
SPP1-204ENST00000504310 NISCHQ9Y2I1 1504 aa17.77■□□□□ 0.43
SPP1-204ENST00000504310 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
SPP1-204ENST00000504310 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
SPP1-204ENST00000504310 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.07
SPP1-204ENST00000504310 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0
SPP1-204ENST00000504310 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
SPP1-204ENST00000504310 DCAF1Q9Y4B6 1507 aa14.85□□□□□ -0.03
SPP1-204ENST00000504310 FOXD1Q16676 465 aa14.69□□□□□ -0.06
SPP1-204ENST00000504310 SHROOM4Q9ULL8 1493 aa14.52□□□□□ -0.08
SPP1-204ENST00000504310 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
SPP1-204ENST00000504310 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
SPP1-204ENST00000504310 ADRA2BP18089 450 aa14.34□□□□□ -0.11
SPP1-204ENST00000504310 ABCC9O60706 1549 aa14.25□□□□□ -0.13
SPP1-204ENST00000504310 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
SPP1-204ENST00000504310 NACADO15069 1562 aa14.17□□□□□ -0.14
SPP1-204ENST00000504310 DCAF8L2P0C7V8 631 aa14.1□□□□□ -0.15
SPP1-204ENST00000504310 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
SPP1-204ENST00000504310 RB1CC1Q8TDY2 1594 aa13.91□□□□□ -0.18
SPP1-204ENST00000504310 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.19
SPP1-204ENST00000504310 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
SPP1-204ENST00000504310 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
SPP1-204ENST00000504310 UNC13AQ9UPW8 1703 aa13.73□□□□□ -0.21
SPP1-204ENST00000504310 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
SPP1-204ENST00000504310 CECR2Q9BXF3 1484 aa13.64□□□□□ -0.23
SPP1-204ENST00000504310 WIZO95785 1651 aa13.63□□□□□ -0.23
SPP1-204ENST00000504310 EIF4G1Q04637 1599 aaKnown RBP13.63□□□□□ -0.23
SPP1-204ENST00000504310 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
SPP1-204ENST00000504310 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.24
SPP1-204ENST00000504310 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
SPP1-204ENST00000504310 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
SPP1-204ENST00000504310 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
SPP1-204ENST00000504310 HRCP23327 699 aa13.43□□□□□ -0.26
SPP1-204ENST00000504310 TRIM41Q8WV44 630 aa13.41□□□□□ -0.26
SPP1-204ENST00000504310 MSH5O43196 834 aa13.34□□□□□ -0.27
SPP1-204ENST00000504310 LOC105371045A0A1W2PR82 267 aa13.33□□□□□ -0.28
SPP1-204ENST00000504310 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
SPP1-204ENST00000504310 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
SPP1-204ENST00000504310 TRIM26Q12899 539 aaPredicted RBP13.29□□□□□ -0.28
SPP1-204ENST00000504310 KCNA4P22459 653 aa13.28□□□□□ -0.28
SPP1-204ENST00000504310 EEA1Q15075 1411 aa13.28□□□□□ -0.28
SPP1-204ENST00000504310 PCGF6Q9BYE7 350 aa13.26□□□□□ -0.29
SPP1-204ENST00000504310 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
SPP1-204ENST00000504310 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
SPP1-204ENST00000504310 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
SPP1-204ENST00000504310 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
SPP1-204ENST00000504310 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
SPP1-204ENST00000504310 ZEB1P37275 1124 aaPredicted RBP13.12□□□□□ -0.31
SPP1-204ENST00000504310 KIF21BO75037 1637 aa13.11□□□□□ -0.31
SPP1-204ENST00000504310 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
SPP1-204ENST00000504310 BIVM-ERCC5R4GMW8 1640 aa13.07□□□□□ -0.32
SPP1-204ENST00000504310 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
SPP1-204ENST00000504310 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
SPP1-204ENST00000504310 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
SPP1-204ENST00000504310 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
SPP1-204ENST00000504310 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
SPP1-204ENST00000504310 NCAPD3P42695 1498 aa13.01□□□□□ -0.33
SPP1-204ENST00000504310 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
SPP1-204ENST00000504310 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
SPP1-204ENST00000504310 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
SPP1-204ENST00000504310 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
SPP1-204ENST00000504310 SOGA1O94964 1423 aa12.97□□□□□ -0.33
SPP1-204ENST00000504310 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
SPP1-204ENST00000504310 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
SPP1-204ENST00000504310 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
SPP1-204ENST00000504310 RUSC2Q8N2Y8 1516 aa12.9□□□□□ -0.34
SPP1-204ENST00000504310 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.34
SPP1-204ENST00000504310 CFTRP13569 1480 aa12.85□□□□□ -0.35
SPP1-204ENST00000504310 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
SPP1-204ENST00000504310 PPARGC1BQ86YN6 1023 aaKnown RBP12.84□□□□□ -0.35
SPP1-204ENST00000504310 CNKSR2Q8WXI2 1034 aa12.82□□□□□ -0.36
SPP1-204ENST00000504310 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
SPP1-204ENST00000504310 PRXQ9BXM0 1461 aa12.79□□□□□ -0.36
SPP1-204ENST00000504310 CUX1P39880 1505 aa12.78□□□□□ -0.36
SPP1-204ENST00000504310 CLIP1P30622 1438 aa12.77□□□□□ -0.37
SPP1-204ENST00000504310 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
SPP1-204ENST00000504310 UBTFP17480 764 aaKnown RBP12.72□□□□□ -0.37
SPP1-204ENST00000504310 KIF27Q86VH2 1401 aa12.71□□□□□ -0.37
SPP1-204ENST00000504310 EHMT2Q96KQ7 1210 aa12.7□□□□□ -0.38
SPP1-204ENST00000504310 CC2D2AQ9P2K1 1620 aa12.65□□□□□ -0.38
SPP1-204ENST00000504310 CADPSQ9ULU8 1353 aa12.64□□□□□ -0.39
SPP1-204ENST00000504310 ARAP1Q96P48 1450 aa12.63□□□□□ -0.39
SPP1-204ENST00000504310 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
SPP1-204ENST00000504310 DMRT2Q9Y5R5 561 aa12.62□□□□□ -0.39
SPP1-204ENST00000504310 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
SPP1-204ENST00000504310 DNMBPQ6XZF7 1577 aa12.6□□□□□ -0.39
SPP1-204ENST00000504310 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
SPP1-204ENST00000504310 CUL7Q14999 1698 aa12.57□□□□□ -0.4
SPP1-204ENST00000504310 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
SPP1-204ENST00000504310 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
SPP1-204ENST00000504310 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
SPP1-204ENST00000504310 CFAP43Q8NDM7 1665 aa12.54□□□□□ -0.4
SPP1-204ENST00000504310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
SPP1-204ENST00000504310 APLP2Q06481 763 aa12.53□□□□□ -0.4
SPP1-204ENST00000504310 CTTNBP2Q8WZ74 1663 aa12.53□□□□□ -0.4
SPP1-204ENST00000504310 CUX2O14529 1486 aa12.53□□□□□ -0.4
SPP1-204ENST00000504310 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
SPP1-204ENST00000504310 CLSPNQ9HAW4 1339 aa12.52□□□□□ -0.41
SPP1-204ENST00000504310 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms