RNA–Protein interactions for RNA: ENST00000595973.2

GDF15-203, Transcript of growth differentiation factor 15, humanhuman

TSL 5

Gene GDF15, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-203ENST00000595973 NISCHQ9Y2I1 1504 aa47.12■■■■■ 5.13
GDF15-203ENST00000595973 CCDC180Q9P1Z9 1646 aa42.26■■■■■ 4.36
GDF15-203ENST00000595973 ABCC9O60706 1549 aa41.85■■■■■ 4.29
GDF15-203ENST00000595973 RB1CC1Q8TDY2 1594 aa40.01■■■■■ 4
GDF15-203ENST00000595973 NACADO15069 1562 aa39.8■■■■□ 3.96
GDF15-203ENST00000595973 DCAF8L2P0C7V8 631 aa39.46■■■■□ 3.91
GDF15-203ENST00000595973 MYO15BQ96JP2 1530 aa39.35■■■■□ 3.89
GDF15-203ENST00000595973 UNC13AQ9UPW8 1703 aa39.24■■■■□ 3.87
GDF15-203ENST00000595973 ZCCHC6Q5VYS8 1495 aaKnown RBP39.15■■■■□ 3.86
GDF15-203ENST00000595973 DCAF1Q9Y4B6 1507 aa38.97■■■■□ 3.83
GDF15-203ENST00000595973 PABPN1Q86U42 306 aaKnown RBP eCLIP38.93■■■■□ 3.82
GDF15-203ENST00000595973 DNAJC5BQ9UF47 199 aa38.92■■■■□ 3.82
GDF15-203ENST00000595973 BICRAQ9NZM4 1560 aa38.87■■■■□ 3.81
GDF15-203ENST00000595973 SCRIBQ14160 1630 aa38.48■■■■□ 3.75
GDF15-203ENST00000595973 SHROOM4Q9ULL8 1493 aa38.36■■■■□ 3.73
GDF15-203ENST00000595973 CC2D2AQ9P2K1 1620 aa37.87■■■■□ 3.65
GDF15-203ENST00000595973 EIF4G1Q04637 1599 aaKnown RBP37.87■■■■□ 3.65
GDF15-203ENST00000595973 CECR2Q9BXF3 1484 aa37.66■■■■□ 3.62
GDF15-203ENST00000595973 SMARCA4P51532 1647 aa36.75■■■■□ 3.47
GDF15-203ENST00000595973 NCAPD3P42695 1498 aa36.69■■■■□ 3.46
GDF15-203ENST00000595973 ATAD2BQ9ULI0 1458 aa36.64■■■■□ 3.46
GDF15-203ENST00000595973 SMARCA2P51531 1590 aa36.58■■■■□ 3.45
GDF15-203ENST00000595973 BAZ1AQ9NRL2 1556 aaPredicted RBP36.57■■■■□ 3.45
GDF15-203ENST00000595973 HMGXB3Q12766 1538 aa36.53■■■■□ 3.44
GDF15-203ENST00000595973 PEG3Q9GZU2 1588 aa36.39■■■■□ 3.42
GDF15-203ENST00000595973 MROH2BQ7Z745 1585 aa36.32■■■■□ 3.4
GDF15-203ENST00000595973 BAZ1BQ9UIG0 1483 aaKnown RBP36.31■■■■□ 3.4
GDF15-203ENST00000595973 ERCC6Q03468 1493 aa36.11■■■■□ 3.37
GDF15-203ENST00000595973 NESP48681 1621 aa36.05■■■■□ 3.36
GDF15-203ENST00000595973 CUX2O14529 1486 aa35.98■■■■□ 3.35
GDF15-203ENST00000595973 WIZO95785 1651 aa35.94■■■■□ 3.34
GDF15-203ENST00000595973 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
GDF15-203ENST00000595973 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
GDF15-203ENST00000595973 KIF21AQ7Z4S6 1674 aa35.7■■■■□ 3.31
GDF15-203ENST00000595973 RSF1Q96T23 1441 aaPredicted RBP35.63■■■■□ 3.29
GDF15-203ENST00000595973 PDS5BQ9NTI5 1447 aa35.58■■■■□ 3.29
GDF15-203ENST00000595973 CADPSQ9ULU8 1353 aa35.57■■■■□ 3.28
GDF15-203ENST00000595973 DNAJC5Q9H3Z4 198 aa35.5■■■■□ 3.27
GDF15-203ENST00000595973 TOP2AP11388 1531 aaKnown RBP35.49■■■■□ 3.27
GDF15-203ENST00000595973 MRC2Q9UBG0 1479 aa35.31■■■■□ 3.24
GDF15-203ENST00000595973 CFTRP13569 1480 aa35.26■■■■□ 3.23
GDF15-203ENST00000595973 WDR62O43379 1518 aa35.25■■■■□ 3.23
GDF15-203ENST00000595973 CEP164Q9UPV0 1460 aa35.23■■■■□ 3.23
GDF15-203ENST00000595973 FANCD2Q9BXW9 1451 aa35.21■■■■□ 3.23
GDF15-203ENST00000595973 PRDM2Q13029 1718 aa35.12■■■■□ 3.21
GDF15-203ENST00000595973 CCDC88BA6NC98 1476 aa35.03■■■■□ 3.2
GDF15-203ENST00000595973 URB2Q14146 1524 aaKnown RBP34.92■■■■□ 3.18
GDF15-203ENST00000595973 TOPBP1Q92547 1522 aa34.59■■■■□ 3.13
GDF15-203ENST00000595973 DNMBPQ6XZF7 1577 aa34.53■■■■□ 3.12
GDF15-203ENST00000595973 ABCC8Q09428 1581 aa34.5■■■■□ 3.11
GDF15-203ENST00000595973 IFT140Q96RY7 1462 aa34.5■■■■□ 3.11
GDF15-203ENST00000595973 ZNF608Q9ULD9 1512 aaPredicted RBP34.43■■■■□ 3.1
GDF15-203ENST00000595973 EIF4G3O43432 1585 aaKnown RBP34.33■■■■□ 3.09
GDF15-203ENST00000595973 TARBP1Q13395 1621 aaKnown RBP34.31■■■■□ 3.08
GDF15-203ENST00000595973 POLA1P09884 1462 aaPredicted RBP34.26■■■■□ 3.07
GDF15-203ENST00000595973 OSCARQ8IYS5 282 aa34.25■■■■□ 3.07
GDF15-203ENST00000595973 SUPT5HO00267 1087 aaKnown RBP34.17■■■■□ 3.06
GDF15-203ENST00000595973 CUX1P39880 1505 aa34.12■■■■□ 3.05
GDF15-203ENST00000595973 AQRO60306 1485 aaKnown RBP eCLIP34.11■■■■□ 3.056e-10■■■■■ 35.4
GDF15-203ENST00000595973 RAD54L2Q9Y4B4 1467 aa34.09■■■■□ 3.05
GDF15-203ENST00000595973 FGD5Q6ZNL6 1462 aa34.08■■■■□ 3.05
GDF15-203ENST00000595973 TRIM41Q8WV44 630 aa34.07■■■■□ 3.04
GDF15-203ENST00000595973 CHD1O14646 1710 aa34.05■■■■□ 3.04
GDF15-203ENST00000595973 SOGA1O94964 1423 aa34.04■■■■□ 3.04
GDF15-203ENST00000595973 WDR97A6NE52 1622 aa34■■■■□ 3.03
GDF15-203ENST00000595973 RIMBP3CA6NJZ7 1639 aa33.95■■■■□ 3.03
GDF15-203ENST00000595973 RIMBP3BA6NNM3 1639 aa33.95■■■■□ 3.03
GDF15-203ENST00000595973 RIMBP3Q9UFD9 1639 aa33.95■■■■□ 3.03
GDF15-203ENST00000595973 TDRD9Q8NDG6 1382 aaKnown RBP33.92■■■■□ 3.02
GDF15-203ENST00000595973 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
GDF15-203ENST00000595973 SNAPC4Q5SXM2 1469 aa33.82■■■■□ 3.01
GDF15-203ENST00000595973 PBRM1Q86U86 1689 aa33.77■■■■□ 3
GDF15-203ENST00000595973 GRIN2BQ13224 1484 aa33.76■■■□□ 2.99
GDF15-203ENST00000595973 FBLN2P98095 1184 aa33.75■■■□□ 2.99
GDF15-203ENST00000595973 MAGI1Q96QZ7 1491 aaPredicted RBP33.75■■■□□ 2.99
GDF15-203ENST00000595973 ABCA10Q8WWZ4 1543 aa33.72■■■□□ 2.99
GDF15-203ENST00000595973 ABCA5Q8WWZ7 1642 aa33.71■■■□□ 2.99
GDF15-203ENST00000595973 BIVM-ERCC5R4GMW8 1640 aa33.71■■■□□ 2.99
GDF15-203ENST00000595973 GAPVD1Q14C86 1478 aa33.67■■■□□ 2.98
GDF15-203ENST00000595973 TOP2BQ02880 1626 aa33.67■■■□□ 2.98
GDF15-203ENST00000595973 SYNJ1O43426 1573 aa33.64■■■□□ 2.98
GDF15-203ENST00000595973 CLASP1Q7Z460 1538 aa33.62■■■□□ 2.97
GDF15-203ENST00000595973 SYNJ2O15056 1496 aa33.62■■■□□ 2.97
GDF15-203ENST00000595973 WRNQ14191 1432 aaPredicted RBP eCLIP33.61■■■□□ 2.97
GDF15-203ENST00000595973 CHMP7Q8WUX9 453 aaPredicted RBP33.56■■■□□ 2.96
GDF15-203ENST00000595973 ARAP1Q96P48 1450 aa33.53■■■□□ 2.96
GDF15-203ENST00000595973 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
GDF15-203ENST00000595973 CYB5RLQ6IPT4 315 aa33.43■■■□□ 2.94
GDF15-203ENST00000595973 GRIN2AQ12879 1464 aa33.34■■■□□ 2.93
GDF15-203ENST00000595973 ERICH3Q5RHP9 1530 aa33.31■■■□□ 2.92
GDF15-203ENST00000595973 FHAD1B1AJZ9 1412 aa33.25■■■□□ 2.91
GDF15-203ENST00000595973 CEP170Q5SW79 1584 aa33.25■■■□□ 2.91
GDF15-203ENST00000595973 NUP160Q12769 1436 aa33.21■■■□□ 2.91
GDF15-203ENST00000595973 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
GDF15-203ENST00000595973 ERCC6L2Q5T890 1561 aa33.1■■■□□ 2.89
GDF15-203ENST00000595973 TRHP20396 242 aaPredicted RBP32.96■■■□□ 2.87
GDF15-203ENST00000595973 RUSC2Q8N2Y8 1516 aa32.96■■■□□ 2.87
GDF15-203ENST00000595973 KIF27Q86VH2 1401 aa32.94■■■□□ 2.86
GDF15-203ENST00000595973 CUL7Q14999 1698 aa32.93■■■□□ 2.86
GDF15-203ENST00000595973 IGF1RP08069 1367 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms