RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 NISCHQ9Y2I1 1504 aa24.88■■□□□ 1.57
CUL4A-203ENST00000375441 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
CUL4A-203ENST00000375441 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
CUL4A-203ENST00000375441 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
CUL4A-203ENST00000375441 PCGF6Q9BYE7 350 aa21.46■■□□□ 1.03
CUL4A-203ENST00000375441 CHIC1Q5VXU3 224 aa21.29■■□□□ 1
CUL4A-203ENST00000375441 HRCP23327 699 aa21.18■□□□□ 0.98
CUL4A-203ENST00000375441 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
CUL4A-203ENST00000375441 LOC105371045A0A1W2PR82 267 aa20.96■□□□□ 0.95
CUL4A-203ENST00000375441 FAM9AQ8IZU1 332 aaPredicted RBP20.94■□□□□ 0.94
CUL4A-203ENST00000375441 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
CUL4A-203ENST00000375441 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
CUL4A-203ENST00000375441 TRIM41Q8WV44 630 aa20.8■□□□□ 0.92
CUL4A-203ENST00000375441 TRIM26Q12899 539 aaPredicted RBP20.73■□□□□ 0.91
CUL4A-203ENST00000375441 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
CUL4A-203ENST00000375441 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
CUL4A-203ENST00000375441 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.89
CUL4A-203ENST00000375441 TTBK1Q5TCY1 1321 aaPredicted RBP20.4■□□□□ 0.86
CUL4A-203ENST00000375441 DCAF1Q9Y4B6 1507 aa20.34■□□□□ 0.85
CUL4A-203ENST00000375441 ABCC9O60706 1549 aa20.33■□□□□ 0.85
CUL4A-203ENST00000375441 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
CUL4A-203ENST00000375441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.04■□□□□ 0.8
CUL4A-203ENST00000375441 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
CUL4A-203ENST00000375441 SCRIBQ14160 1630 aa20.03■□□□□ 0.8
CUL4A-203ENST00000375441 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
CUL4A-203ENST00000375441 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
CUL4A-203ENST00000375441 APLP2Q06481 763 aa19.97■□□□□ 0.79
CUL4A-203ENST00000375441 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
CUL4A-203ENST00000375441 RANGAP1P46060 587 aaPredicted RBP19.89■□□□□ 0.78
CUL4A-203ENST00000375441 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
CUL4A-203ENST00000375441 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.76
CUL4A-203ENST00000375441 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.75
CUL4A-203ENST00000375441 HNRNPUL2Q1KMD3 747 aaKnown RBP19.68■□□□□ 0.74
CUL4A-203ENST00000375441 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
CUL4A-203ENST00000375441 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
CUL4A-203ENST00000375441 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
CUL4A-203ENST00000375441 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
CUL4A-203ENST00000375441 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
CUL4A-203ENST00000375441 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
CUL4A-203ENST00000375441 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
CUL4A-203ENST00000375441 ZNF316A6NFI3 1004 aaPredicted RBP19.44■□□□□ 0.7
CUL4A-203ENST00000375441 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
CUL4A-203ENST00000375441 NACADO15069 1562 aa19.38■□□□□ 0.69
CUL4A-203ENST00000375441 CEP162Q5TB80 1403 aa19.31■□□□□ 0.68
CUL4A-203ENST00000375441 ITGAEP38570 1179 aa19.3■□□□□ 0.68
CUL4A-203ENST00000375441 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
CUL4A-203ENST00000375441 WIZO95785 1651 aa19.22■□□□□ 0.67
CUL4A-203ENST00000375441 MYT1Q01538 1121 aa19.21■□□□□ 0.67
CUL4A-203ENST00000375441 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
CUL4A-203ENST00000375441 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
CUL4A-203ENST00000375441 SOGA1O94964 1423 aa19.17■□□□□ 0.66
CUL4A-203ENST00000375441 CCDC88BA6NC98 1476 aa19.15■□□□□ 0.66
CUL4A-203ENST00000375441 ABCC8Q09428 1581 aa19.14■□□□□ 0.65
CUL4A-203ENST00000375441 EEA1Q15075 1411 aa19.13■□□□□ 0.65
CUL4A-203ENST00000375441 MIER1Q8N108 512 aa19.11■□□□□ 0.65
CUL4A-203ENST00000375441 GOLGA3Q08378 1498 aa19.09■□□□□ 0.65
CUL4A-203ENST00000375441 CLIP1P30622 1438 aa19.06■□□□□ 0.64
CUL4A-203ENST00000375441 WRNQ14191 1432 aaPredicted RBP eCLIP19.05■□□□□ 0.641e-6■■■■■ 58.5
CUL4A-203ENST00000375441 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
CUL4A-203ENST00000375441 NEFLP07196 543 aa18.94■□□□□ 0.62
CUL4A-203ENST00000375441 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
CUL4A-203ENST00000375441 FAM50AQ14320 339 aaKnown RBP18.91■□□□□ 0.62
CUL4A-203ENST00000375441 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
CUL4A-203ENST00000375441 SMARCA4P51532 1647 aa18.79■□□□□ 0.6
CUL4A-203ENST00000375441 BCANQ96GW7 911 aa18.79■□□□□ 0.6
CUL4A-203ENST00000375441 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
CUL4A-203ENST00000375441 P3H3Q8IVL6 736 aa18.77■□□□□ 0.59
CUL4A-203ENST00000375441 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
CUL4A-203ENST00000375441 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
CUL4A-203ENST00000375441 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
CUL4A-203ENST00000375441 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
CUL4A-203ENST00000375441 KANK4Q5T7N3 995 aaPredicted RBP18.65■□□□□ 0.58
CUL4A-203ENST00000375441 ERICH6Q7L0X2 663 aa18.64■□□□□ 0.57
CUL4A-203ENST00000375441 RAPGEF2Q9Y4G8 1499 aa18.63■□□□□ 0.57
CUL4A-203ENST00000375441 ANP32CO43423 234 aa18.63■□□□□ 0.57
CUL4A-203ENST00000375441 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
CUL4A-203ENST00000375441 FKBP8Q14318 412 aa18.56■□□□□ 0.56
CUL4A-203ENST00000375441 HIRIP3Q9BW71 556 aaPredicted RBP18.54■□□□□ 0.56
CUL4A-203ENST00000375441 CCNB3Q8WWL7 1395 aa18.52■□□□□ 0.56
CUL4A-203ENST00000375441 SUPT16HQ9Y5B9 1047 aaKnown RBP18.52■□□□□ 0.55
CUL4A-203ENST00000375441 ATAD2BQ9ULI0 1458 aa18.5■□□□□ 0.55
CUL4A-203ENST00000375441 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
CUL4A-203ENST00000375441 DHX57Q6P158 1386 aaKnown RBP18.48■□□□□ 0.55
CUL4A-203ENST00000375441 SIN3AQ96ST3 1273 aa18.47■□□□□ 0.55
CUL4A-203ENST00000375441 CNGB1Q14028 1251 aaPredicted RBP18.46■□□□□ 0.55
CUL4A-203ENST00000375441 TONSLQ96HA7 1378 aa18.43■□□□□ 0.54
CUL4A-203ENST00000375441 POLR3GLQ9BT43 218 aa18.43■□□□□ 0.54
CUL4A-203ENST00000375441 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
CUL4A-203ENST00000375441 EIF4G1Q04637 1599 aaKnown RBP18.4■□□□□ 0.54
CUL4A-203ENST00000375441 KIF21BO75037 1637 aa18.39■□□□□ 0.53
CUL4A-203ENST00000375441 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
CUL4A-203ENST00000375441 CUX2O14529 1486 aa18.33■□□□□ 0.53
CUL4A-203ENST00000375441 HNRNPUQ00839 825 aaKnown RBP eCLIP18.33■□□□□ 0.52
CUL4A-203ENST00000375441 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
CUL4A-203ENST00000375441 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
CUL4A-203ENST00000375441 KCNH8Q96L42 1107 aa18.31■□□□□ 0.52
CUL4A-203ENST00000375441 FBLN2P98095 1184 aa18.3■□□□□ 0.52
CUL4A-203ENST00000375441 SETD5Q9C0A6 1442 aa18.3■□□□□ 0.52
CUL4A-203ENST00000375441 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
CUL4A-203ENST00000375441 MTUS2Q5JR59 1369 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms