RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 AEBP2Q6ZN18 517 aaPredicted RBP27.22■■□□□ 1.95
CNOT1-208ENST00000565697 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
CNOT1-208ENST00000565697 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
CNOT1-208ENST00000565697 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
CNOT1-208ENST00000565697 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
CNOT1-208ENST00000565697 FOXD1Q16676 465 aa21.86■■□□□ 1.09
CNOT1-208ENST00000565697 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
CNOT1-208ENST00000565697 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
CNOT1-208ENST00000565697 ABCC9O60706 1549 aa21.12■□□□□ 0.97
CNOT1-208ENST00000565697 MSH5O43196 834 aa20.8■□□□□ 0.92
CNOT1-208ENST00000565697 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
CNOT1-208ENST00000565697 PIAS4Q8N2W9 510 aaPredicted RBP20.29■□□□□ 0.84
CNOT1-208ENST00000565697 NACADO15069 1562 aa20.27■□□□□ 0.84
CNOT1-208ENST00000565697 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
CNOT1-208ENST00000565697 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
CNOT1-208ENST00000565697 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
CNOT1-208ENST00000565697 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
CNOT1-208ENST00000565697 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
CNOT1-208ENST00000565697 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
CNOT1-208ENST00000565697 ADRA2BP18089 450 aa19.79■□□□□ 0.76
CNOT1-208ENST00000565697 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
CNOT1-208ENST00000565697 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
CNOT1-208ENST00000565697 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
CNOT1-208ENST00000565697 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
CNOT1-208ENST00000565697 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
CNOT1-208ENST00000565697 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
CNOT1-208ENST00000565697 EIF4G1Q04637 1599 aaKnown RBP19.16■□□□□ 0.66
CNOT1-208ENST00000565697 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
CNOT1-208ENST00000565697 CECR2Q9BXF3 1484 aa19.02■□□□□ 0.63
CNOT1-208ENST00000565697 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
CNOT1-208ENST00000565697 SMARCA4P51532 1647 aa18.73■□□□□ 0.59
CNOT1-208ENST00000565697 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
CNOT1-208ENST00000565697 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
CNOT1-208ENST00000565697 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
CNOT1-208ENST00000565697 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
CNOT1-208ENST00000565697 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
CNOT1-208ENST00000565697 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
CNOT1-208ENST00000565697 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
CNOT1-208ENST00000565697 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
CNOT1-208ENST00000565697 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
CNOT1-208ENST00000565697 WIZO95785 1651 aa18.35■□□□□ 0.53
CNOT1-208ENST00000565697 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
CNOT1-208ENST00000565697 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
CNOT1-208ENST00000565697 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
CNOT1-208ENST00000565697 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
CNOT1-208ENST00000565697 NESP48681 1621 aa18.22■□□□□ 0.51
CNOT1-208ENST00000565697 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
CNOT1-208ENST00000565697 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
CNOT1-208ENST00000565697 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
CNOT1-208ENST00000565697 PDS5BQ9NTI5 1447 aa18.13■□□□□ 0.49
CNOT1-208ENST00000565697 CUX2O14529 1486 aa18.12■□□□□ 0.49
CNOT1-208ENST00000565697 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
CNOT1-208ENST00000565697 CFTRP13569 1480 aa18■□□□□ 0.47
CNOT1-208ENST00000565697 THOC2Q8NI27 1593 aaKnown RBP17.98■□□□□ 0.47
CNOT1-208ENST00000565697 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
CNOT1-208ENST00000565697 FANCD2Q9BXW9 1451 aa17.93■□□□□ 0.46
CNOT1-208ENST00000565697 MRC2Q9UBG0 1479 aa17.92■□□□□ 0.46
CNOT1-208ENST00000565697 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
CNOT1-208ENST00000565697 WDR62O43379 1518 aa17.85■□□□□ 0.45
CNOT1-208ENST00000565697 PRDM2Q13029 1718 aa17.85■□□□□ 0.45
CNOT1-208ENST00000565697 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
CNOT1-208ENST00000565697 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
CNOT1-208ENST00000565697 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
CNOT1-208ENST00000565697 DNAJC5Q9H3Z4 198 aa17.68■□□□□ 0.42
CNOT1-208ENST00000565697 ABCC8Q09428 1581 aa17.67■□□□□ 0.42
CNOT1-208ENST00000565697 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
CNOT1-208ENST00000565697 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
CNOT1-208ENST00000565697 DNMBPQ6XZF7 1577 aa17.59■□□□□ 0.41
CNOT1-208ENST00000565697 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
CNOT1-208ENST00000565697 HOXD11P31277 338 aaPredicted RBP17.47■□□□□ 0.39
CNOT1-208ENST00000565697 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
CNOT1-208ENST00000565697 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
CNOT1-208ENST00000565697 CUX1P39880 1505 aa17.42■□□□□ 0.38
CNOT1-208ENST00000565697 SOGA1O94964 1423 aa17.41■□□□□ 0.38
CNOT1-208ENST00000565697 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
CNOT1-208ENST00000565697 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
CNOT1-208ENST00000565697 C1QBPQ07021 282 aaKnown RBP17.38■□□□□ 0.37
CNOT1-208ENST00000565697 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
CNOT1-208ENST00000565697 OSCARQ8IYS5 282 aa17.37■□□□□ 0.37
CNOT1-208ENST00000565697 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
CNOT1-208ENST00000565697 WDR97A6NE52 1622 aa17.34■□□□□ 0.37
CNOT1-208ENST00000565697 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.378e-7■■■■■ 28.7
CNOT1-208ENST00000565697 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
CNOT1-208ENST00000565697 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
CNOT1-208ENST00000565697 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
CNOT1-208ENST00000565697 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
CNOT1-208ENST00000565697 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
CNOT1-208ENST00000565697 ABCA10Q8WWZ4 1543 aa17.24■□□□□ 0.35
CNOT1-208ENST00000565697 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
CNOT1-208ENST00000565697 SYNJ1O43426 1573 aa17.22■□□□□ 0.35
CNOT1-208ENST00000565697 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
CNOT1-208ENST00000565697 FBLN2P98095 1184 aa17.2■□□□□ 0.34
CNOT1-208ENST00000565697 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
CNOT1-208ENST00000565697 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
CNOT1-208ENST00000565697 CHD1O14646 1710 aa17.17■□□□□ 0.34
CNOT1-208ENST00000565697 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
CNOT1-208ENST00000565697 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
CNOT1-208ENST00000565697 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
CNOT1-208ENST00000565697 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
CNOT1-208ENST00000565697 PBRM1Q86U86 1689 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms