RNA–Protein interactions for RNA: ENST00000237623.11

SPP1-201, Transcript of secreted phosphoprotein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPP1, Length 1,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPP1-201ENST00000237623 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
SPP1-201ENST00000237623 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.73
SPP1-201ENST00000237623 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
SPP1-201ENST00000237623 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
SPP1-201ENST00000237623 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
SPP1-201ENST00000237623 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
SPP1-201ENST00000237623 CCDC180Q9P1Z9 1646 aa17.02■□□□□ 0.31
SPP1-201ENST00000237623 FOXD1Q16676 465 aa16.85■□□□□ 0.29
SPP1-201ENST00000237623 MSH5O43196 834 aa16.67■□□□□ 0.26
SPP1-201ENST00000237623 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
SPP1-201ENST00000237623 ABCC9O60706 1549 aa16.25■□□□□ 0.19
SPP1-201ENST00000237623 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
SPP1-201ENST00000237623 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
SPP1-201ENST00000237623 SHROOM4Q9ULL8 1493 aa16.01■□□□□ 0.15
SPP1-201ENST00000237623 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
SPP1-201ENST00000237623 NACADO15069 1562 aa15.85■□□□□ 0.13
SPP1-201ENST00000237623 RB1CC1Q8TDY2 1594 aa15.77■□□□□ 0.12
SPP1-201ENST00000237623 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
SPP1-201ENST00000237623 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
SPP1-201ENST00000237623 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
SPP1-201ENST00000237623 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
SPP1-201ENST00000237623 BICRAQ9NZM4 1560 aa15.3■□□□□ 0.04
SPP1-201ENST00000237623 CACNB1Q02641 598 aaPredicted RBP15.25■□□□□ 0.03
SPP1-201ENST00000237623 RSF1Q96T23 1441 aaPredicted RBP15.23■□□□□ 0.03
SPP1-201ENST00000237623 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
SPP1-201ENST00000237623 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
SPP1-201ENST00000237623 BAZ1AQ9NRL2 1556 aaPredicted RBP15.12■□□□□ 0.01
SPP1-201ENST00000237623 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
SPP1-201ENST00000237623 SMARCA4P51532 1647 aa15.02□□□□□ -0.01
SPP1-201ENST00000237623 WIZO95785 1651 aa14.98□□□□□ -0.01
SPP1-201ENST00000237623 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
SPP1-201ENST00000237623 TOP2AP11388 1531 aaKnown RBP14.86□□□□□ -0.03
SPP1-201ENST00000237623 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
SPP1-201ENST00000237623 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
SPP1-201ENST00000237623 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
SPP1-201ENST00000237623 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
SPP1-201ENST00000237623 CCDC88BA6NC98 1476 aa14.7□□□□□ -0.06
SPP1-201ENST00000237623 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
SPP1-201ENST00000237623 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
SPP1-201ENST00000237623 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
SPP1-201ENST00000237623 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
SPP1-201ENST00000237623 POTEHQ6S545 545 aa14.59□□□□□ -0.07
SPP1-201ENST00000237623 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
SPP1-201ENST00000237623 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
SPP1-201ENST00000237623 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
SPP1-201ENST00000237623 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
SPP1-201ENST00000237623 CFTRP13569 1480 aa14.32□□□□□ -0.12
SPP1-201ENST00000237623 LOC105371045A0A1W2PR82 267 aa14.3□□□□□ -0.12
SPP1-201ENST00000237623 FAM9AQ8IZU1 332 aaPredicted RBP14.28□□□□□ -0.12
SPP1-201ENST00000237623 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.13
SPP1-201ENST00000237623 SYNJ1O43426 1573 aa14.24□□□□□ -0.13
SPP1-201ENST00000237623 EEA1Q15075 1411 aa14.23□□□□□ -0.13
SPP1-201ENST00000237623 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
SPP1-201ENST00000237623 ADRA2BP18089 450 aa14.22□□□□□ -0.13
SPP1-201ENST00000237623 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
SPP1-201ENST00000237623 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
SPP1-201ENST00000237623 SOGA1O94964 1423 aa14.17□□□□□ -0.14
SPP1-201ENST00000237623 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
SPP1-201ENST00000237623 NESP48681 1621 aa14.15□□□□□ -0.15
SPP1-201ENST00000237623 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
SPP1-201ENST00000237623 CUX1P39880 1505 aa14.13□□□□□ -0.15
SPP1-201ENST00000237623 RUSC2Q8N2Y8 1516 aa14.1□□□□□ -0.15
SPP1-201ENST00000237623 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
SPP1-201ENST00000237623 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
SPP1-201ENST00000237623 EHMT2Q96KQ7 1210 aa14.04□□□□□ -0.16
SPP1-201ENST00000237623 GOLGA3Q08378 1498 aa14.02□□□□□ -0.17
SPP1-201ENST00000237623 PDS5BQ9NTI5 1447 aa14.02□□□□□ -0.17
SPP1-201ENST00000237623 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
SPP1-201ENST00000237623 TNIKQ9UKE5 1360 aa14.01□□□□□ -0.17
SPP1-201ENST00000237623 KIF21BO75037 1637 aa14□□□□□ -0.17
SPP1-201ENST00000237623 DMRT2Q9Y5R5 561 aa14□□□□□ -0.17
SPP1-201ENST00000237623 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
SPP1-201ENST00000237623 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
SPP1-201ENST00000237623 ERCC6Q03468 1493 aa13.97□□□□□ -0.17
SPP1-201ENST00000237623 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
SPP1-201ENST00000237623 UBTFP17480 764 aaKnown RBP13.96□□□□□ -0.18
SPP1-201ENST00000237623 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
SPP1-201ENST00000237623 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
SPP1-201ENST00000237623 THOC2Q8NI27 1593 aaKnown RBP13.93□□□□□ -0.18
SPP1-201ENST00000237623 CEP162Q5TB80 1403 aa13.91□□□□□ -0.18
SPP1-201ENST00000237623 PRXQ9BXM0 1461 aa13.9□□□□□ -0.18
SPP1-201ENST00000237623 ERICH3Q5RHP9 1530 aa13.9□□□□□ -0.18
SPP1-201ENST00000237623 CUX2O14529 1486 aa13.9□□□□□ -0.18
SPP1-201ENST00000237623 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
SPP1-201ENST00000237623 URB2Q14146 1524 aaKnown RBP13.88□□□□□ -0.19
SPP1-201ENST00000237623 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
SPP1-201ENST00000237623 MRC2Q9UBG0 1479 aa13.88□□□□□ -0.19
SPP1-201ENST00000237623 ABCA10Q8WWZ4 1543 aa13.86□□□□□ -0.19
SPP1-201ENST00000237623 WDR62O43379 1518 aa13.85□□□□□ -0.19
SPP1-201ENST00000237623 IGF1RP08069 1367 aa13.84□□□□□ -0.19
SPP1-201ENST00000237623 RAD54L2Q9Y4B4 1467 aa13.82□□□□□ -0.2
SPP1-201ENST00000237623 TRIM26Q12899 539 aaPredicted RBP13.8□□□□□ -0.2
SPP1-201ENST00000237623 PCGF6Q9BYE7 350 aa13.79□□□□□ -0.2
SPP1-201ENST00000237623 CLIP1P30622 1438 aa13.78□□□□□ -0.2
SPP1-201ENST00000237623 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
SPP1-201ENST00000237623 WDR97A6NE52 1622 aa13.76□□□□□ -0.21
SPP1-201ENST00000237623 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
SPP1-201ENST00000237623 CUL7Q14999 1698 aa13.72□□□□□ -0.21
SPP1-201ENST00000237623 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
SPP1-201ENST00000237623 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms