Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.72■□□□□ 0.431e-6■□□□□ 9.4
DDX52Q9Y2R4 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC14.57□□□□□ -0.084e-7■□□□□ 9.4
DDX52Q9Y2R4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.734e-7■□□□□ 9.4
DDX52Q9Y2R4 MT-RNR2-201ENST00000387347 1559 ntBASIC6.54□□□□□ -1.361e-323■□□□□ 9.4
DDX52Q9Y2R4 MICALL2-211ENST00000487156 874 ntTSL 522.87■■□□□ 1.251e-6■□□□□ 9.3
DDX52Q9Y2R4 BRD2-206ENST00000456339 887 ntTSL 417.8■□□□□ 0.441e-6■□□□□ 9.3
DDX52Q9Y2R4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.371e-6■□□□□ 9.3
DDX52Q9Y2R4 BRD2-213ENST00000495733 3404 ntTSL 215.62■□□□□ 0.091e-6■□□□□ 9.3
DDX52Q9Y2R4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.081e-6■□□□□ 9.3
DDX52Q9Y2R4 BRD2-212ENST00000482914 4834 ntTSL 1 (best)14.83□□□□□ -0.041e-6■□□□□ 9.3
DDX52Q9Y2R4 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)14.47□□□□□ -0.091e-6■□□□□ 9.3
DDX52Q9Y2R4 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC13.14□□□□□ -0.311e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-208ENST00000471894 812 ntTSL 312.44□□□□□ -0.421e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-210ENST00000490546 707 ntTSL 412.2□□□□□ -0.461e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.641e-12■□□□□ 9.3
DDX52Q9Y2R4 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.721e-6■□□□□ 9.3
DDX52Q9Y2R4 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC10.19□□□□□ -0.781e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-223ENST00000532678 793 ntTSL 49.49□□□□□ -0.891e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.011e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.09□□□□□ -1.111e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-211ENST00000498419 3068 ntTSL 57.72□□□□□ -1.171e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-214ENST00000525843 4528 ntTSL 57.59□□□□□ -1.191e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.211e-12■□□□□ 9.3
DDX52Q9Y2R4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.21□□□□□ -1.261e-12■□□□□ 9.3
DDX52Q9Y2R4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.4■□□□□ 0.861e-21■□□□□ 9.3
DDX52Q9Y2R4 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC13.83□□□□□ -0.21e-21■□□□□ 9.3
DDX52Q9Y2R4 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC12.23□□□□□ -0.451e-21■□□□□ 9.3
DDX52Q9Y2R4 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC12.23□□□□□ -0.451e-21■□□□□ 9.3
DDX52Q9Y2R4 ELOVL5-204ENST00000465983 696 ntTSL 315.11■□□□□ 0.013e-7■□□□□ 9.2
DDX52Q9Y2R4 ELOVL5-206ENST00000486973 794 ntTSL 314.94□□□□□ -0.023e-7■□□□□ 9.2
DDX52Q9Y2R4 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC14.19□□□□□ -0.143e-7■□□□□ 9.2
DDX52Q9Y2R4 ELOVL5-205ENST00000485336 761 ntTSL 511.17□□□□□ -0.623e-7■□□□□ 9.2
DDX52Q9Y2R4 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.983e-7■□□□□ 9.2
DDX52Q9Y2R4 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.88□□□□□ -0.993e-7■□□□□ 9.2
DDX52Q9Y2R4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.09□□□□□ -1.273e-7■□□□□ 9.2
DDX52Q9Y2R4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.68■■□□□ 1.383e-16■□□□□ 9.2
DDX52Q9Y2R4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.7■■□□□ 1.063e-16■□□□□ 9.2
DDX52Q9Y2R4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.683e-16■□□□□ 9.2
DDX52Q9Y2R4 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)13.94□□□□□ -0.183e-16■□□□□ 9.2
DDX52Q9Y2R4 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)9.64□□□□□ -0.873e-16■□□□□ 9.2
DDX52Q9Y2R4 TRIM28-204ENST00000594806 861 ntTSL 530.59■■■□□ 2.498e-9■□□□□ 9.2
DDX52Q9Y2R4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.84■■□□□ 1.578e-9■□□□□ 9.2
DDX52Q9Y2R4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.448e-9■□□□□ 9.2
DDX52Q9Y2R4 MIIP-203ENST00000466860 1709 ntTSL 520.82■□□□□ 0.928e-9■□□□□ 9.2
DDX52Q9Y2R4 MIIP-207ENST00000498685 1392 ntTSL 220.64■□□□□ 0.898e-9■□□□□ 9.2
DDX52Q9Y2R4 MIIP-205ENST00000478749 779 ntTSL 218.12■□□□□ 0.498e-9■□□□□ 9.2
DDX52Q9Y2R4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.498e-9■□□□□ 9.2
DDX52Q9Y2R4 TRIM28-203ENST00000593582 533 ntTSL 318.11■□□□□ 0.498e-9■□□□□ 9.2
DDX52Q9Y2R4 MIIP-202ENST00000460823 955 ntTSL 518.03■□□□□ 0.488e-9■□□□□ 9.2
DDX52Q9Y2R4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.168e-9■□□□□ 9.2
DDX52Q9Y2R4 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.058e-9■□□□□ 9.2
DDX52Q9Y2R4 HBP1-209ENST00000478930 563 ntTSL 47.2□□□□□ -1.268e-9■□□□□ 9.2
DDX52Q9Y2R4 HBP1-205ENST00000464009 478 ntTSL 54.21□□□□□ -1.748e-9■□□□□ 9.2
DDX52Q9Y2R4 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)23.86■■□□□ 1.414e-9■□□□□ 9.1
DDX52Q9Y2R4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.314e-9■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-214ENST00000503282 584 ntTSL 226.07■■□□□ 1.761e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.641e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-229ENST00000510129 582 ntTSL 325.29■■□□□ 1.641e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)24.91■■□□□ 1.581e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-220ENST00000505307 743 ntTSL 523.68■■□□□ 1.381e-8■□□□□ 9.1
DDX52Q9Y2R4 FLOT2-208ENST00000582174 703 ntTSL 323.5■■□□□ 1.351e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-215ENST00000503418 662 ntTSL 423.07■■□□□ 1.281e-8■□□□□ 9.1
DDX52Q9Y2R4 FLOT2-212ENST00000593158 752 ntTSL 522.31■■□□□ 1.161e-8■□□□□ 9.1
DDX52Q9Y2R4 RBM14-209ENST00000512283 567 ntTSL 421.86■■□□□ 1.091e-8■□□□□ 9.1
DDX52Q9Y2R4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.881e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-213ENST00000502690 599 ntTSL 420.28■□□□□ 0.841e-8■□□□□ 9.1
DDX52Q9Y2R4 FLOT2-204ENST00000577789 2503 ntTSL 518.89■□□□□ 0.611e-8■□□□□ 9.1
DDX52Q9Y2R4 FLOT2-206ENST00000580805 2679 ntTSL 518.77■□□□□ 0.61e-8■□□□□ 9.1
DDX52Q9Y2R4 CDK19-208ENST00000497709 1117 ntTSL 318.14■□□□□ 0.491e-8■□□□□ 9.1
DDX52Q9Y2R4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.481e-8■□□□□ 9.1
DDX52Q9Y2R4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.91■□□□□ 0.461e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.421e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-228ENST00000508974 568 ntTSL 417.58■□□□□ 0.41e-8■□□□□ 9.1
DDX52Q9Y2R4 CDK19-207ENST00000468997 1083 ntTSL 1 (best)16.94■□□□□ 0.31e-8■□□□□ 9.1
DDX52Q9Y2R4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.211e-8■□□□□ 9.1
DDX52Q9Y2R4 RBM14-205ENST00000443702 732 ntTSL 3 BASIC15.49■□□□□ 0.071e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -01e-8■□□□□ 9.1
DDX52Q9Y2R4 CDK19-205ENST00000460913 448 ntTSL 514.76□□□□□ -0.051e-8■□□□□ 9.1
DDX52Q9Y2R4 RBM14-203ENST00000409372 876 ntTSL 2 BASIC14.51□□□□□ -0.091e-8■□□□□ 9.1
DDX52Q9Y2R4 FLOT2-211ENST00000586827 1069 ntTSL 513.95□□□□□ -0.181e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-232ENST00000514755 593 ntTSL 413.11□□□□□ -0.311e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.361e-8■□□□□ 9.1
DDX52Q9Y2R4 CDK19-204ENST00000457688 955 ntTSL 512.77□□□□□ -0.371e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC12.1□□□□□ -0.471e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-227ENST00000508818 584 ntTSL 211.92□□□□□ -0.51e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.611e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.681e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-223ENST00000508249 604 ntTSL 410.82□□□□□ -0.681e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-222ENST00000508238 547 ntTSL 49.45□□□□□ -0.91e-8■□□□□ 9.1
DDX52Q9Y2R4 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.94□□□□□ -0.981e-8■□□□□ 9.1
DDX52Q9Y2R4 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC8□□□□□ -1.131e-8■□□□□ 9.1
DDX52Q9Y2R4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.76□□□□□ -1.171e-8■□□□□ 9.1
DDX52Q9Y2R4 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)34■■■■□ 3.032e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.682e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.62e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.91■■■□□ 2.542e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.42e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-220ENST00000519767 970 ntTSL 1 (best)30.04■■■□□ 2.42e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.92■■■□□ 2.382e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.92■■■□□ 2.382e-6■□□□□ 9
Retrieved 100 of 4,483 protein–RNA pairs in 73.4 ms