RNA–Protein interactions for RNA: ENST00000323817.7

CDK19-201, Transcript of cyclin dependent kinase 19, humanhuman

TSL 1 (best) BASIC

Gene CDK19, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK19-201ENST00000323817 NISCHQ9Y2I1 1504 aa17.23■□□□□ 0.35
CDK19-201ENST00000323817 CCDC180Q9P1Z9 1646 aa15.05■□□□□ -0
CDK19-201ENST00000323817 ZCCHC6Q5VYS8 1495 aaKnown RBP14.53□□□□□ -0.08
CDK19-201ENST00000323817 PELP1Q8IZL8 1130 aaKnown RBP14.51□□□□□ -0.09
CDK19-201ENST00000323817 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
CDK19-201ENST00000323817 MYO15BQ96JP2 1530 aa14.16□□□□□ -0.14
CDK19-201ENST00000323817 ERICH6Q7L0X2 663 aa14.03□□□□□ -0.16
CDK19-201ENST00000323817 MYT1Q01538 1121 aa13.92□□□□□ -0.18
CDK19-201ENST00000323817 ABCC9O60706 1549 aa13.92□□□□□ -0.18
CDK19-201ENST00000323817 NACADO15069 1562 aa13.91□□□□□ -0.18
CDK19-201ENST00000323817 CCER1Q8TC90 406 aaPredicted RBP13.82□□□□□ -0.2
CDK19-201ENST00000323817 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
CDK19-201ENST00000323817 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
CDK19-201ENST00000323817 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
CDK19-201ENST00000323817 SCRIBQ14160 1630 aa13.69□□□□□ -0.22
CDK19-201ENST00000323817 UNC13AQ9UPW8 1703 aa13.66□□□□□ -0.22
CDK19-201ENST00000323817 BICRAQ9NZM4 1560 aa13.49□□□□□ -0.25
CDK19-201ENST00000323817 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
CDK19-201ENST00000323817 RSF1Q96T23 1441 aaPredicted RBP13.37□□□□□ -0.27
CDK19-201ENST00000323817 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
CDK19-201ENST00000323817 MROH2BQ7Z745 1585 aa13.31□□□□□ -0.28
CDK19-201ENST00000323817 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.29
CDK19-201ENST00000323817 SUPT5HO00267 1087 aaKnown RBP13.26□□□□□ -0.29
CDK19-201ENST00000323817 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
CDK19-201ENST00000323817 SMARCA4P51532 1647 aa13.23□□□□□ -0.29
CDK19-201ENST00000323817 WIZO95785 1651 aa13.2□□□□□ -0.3
CDK19-201ENST00000323817 PEG3Q9GZU2 1588 aa13.18□□□□□ -0.3
CDK19-201ENST00000323817 DAXXQ9UER7 740 aaPredicted RBP13.17□□□□□ -0.3
CDK19-201ENST00000323817 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
CDK19-201ENST00000323817 NEFLP07196 543 aa13.1□□□□□ -0.31
CDK19-201ENST00000323817 PABPN1Q86U42 306 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDK19-201ENST00000323817 EIF4G1Q04637 1599 aaKnown RBP13.06□□□□□ -0.32
CDK19-201ENST00000323817 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
CDK19-201ENST00000323817 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
CDK19-201ENST00000323817 ATAD2BQ9ULI0 1458 aa12.96□□□□□ -0.33
CDK19-201ENST00000323817 APLP2Q06481 763 aa12.95□□□□□ -0.34
CDK19-201ENST00000323817 CHIC1Q5VXU3 224 aa12.94□□□□□ -0.34
CDK19-201ENST00000323817 CCDC88BA6NC98 1476 aa12.9□□□□□ -0.34
CDK19-201ENST00000323817 HMGXB3Q12766 1538 aa12.87□□□□□ -0.35
CDK19-201ENST00000323817 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
CDK19-201ENST00000323817 FAM9AQ8IZU1 332 aaPredicted RBP12.83□□□□□ -0.35
CDK19-201ENST00000323817 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
CDK19-201ENST00000323817 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
CDK19-201ENST00000323817 BAZ1BQ9UIG0 1483 aaKnown RBP12.79□□□□□ -0.36
CDK19-201ENST00000323817 CC2D2AQ9P2K1 1620 aa12.72□□□□□ -0.37
CDK19-201ENST00000323817 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
CDK19-201ENST00000323817 ABCC8Q09428 1581 aa12.63□□□□□ -0.39
CDK19-201ENST00000323817 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
CDK19-201ENST00000323817 CFTRP13569 1480 aa12.59□□□□□ -0.39
CDK19-201ENST00000323817 SYNJ1O43426 1573 aa12.56□□□□□ -0.4
CDK19-201ENST00000323817 RANGAP1P46060 587 aaPredicted RBP12.55□□□□□ -0.4
CDK19-201ENST00000323817 CLSPNQ9HAW4 1339 aa12.55□□□□□ -0.4
CDK19-201ENST00000323817 PCGF6Q9BYE7 350 aa12.55□□□□□ -0.4
CDK19-201ENST00000323817 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
CDK19-201ENST00000323817 GLIPR1L2Q4G1C9 344 aa12.53□□□□□ -0.4
CDK19-201ENST00000323817 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
CDK19-201ENST00000323817 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
CDK19-201ENST00000323817 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.41
CDK19-201ENST00000323817 EIF5BO60841 1220 aaKnown RBP12.47□□□□□ -0.41
CDK19-201ENST00000323817 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
CDK19-201ENST00000323817 CUX1P39880 1505 aa12.44□□□□□ -0.42
CDK19-201ENST00000323817 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
CDK19-201ENST00000323817 SOGA1O94964 1423 aa12.39□□□□□ -0.43
CDK19-201ENST00000323817 RUSC2Q8N2Y8 1516 aa12.39□□□□□ -0.43
CDK19-201ENST00000323817 DNAJC5BQ9UF47 199 aa12.38□□□□□ -0.43
CDK19-201ENST00000323817 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
CDK19-201ENST00000323817 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
CDK19-201ENST00000323817 EEA1Q15075 1411 aa12.35□□□□□ -0.43
CDK19-201ENST00000323817 NESP48681 1621 aa12.34□□□□□ -0.43
CDK19-201ENST00000323817 KIF21BO75037 1637 aa12.3□□□□□ -0.44
CDK19-201ENST00000323817 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
CDK19-201ENST00000323817 DNMBPQ6XZF7 1577 aa12.27□□□□□ -0.45
CDK19-201ENST00000323817 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.45
CDK19-201ENST00000323817 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
CDK19-201ENST00000323817 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
CDK19-201ENST00000323817 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
CDK19-201ENST00000323817 ATP1B4Q9UN42 357 aaPredicted RBP12.25□□□□□ -0.45
CDK19-201ENST00000323817 URB2Q14146 1524 aaKnown RBP12.23□□□□□ -0.45
CDK19-201ENST00000323817 TOPBP1Q92547 1522 aa12.23□□□□□ -0.45
CDK19-201ENST00000323817 ANP32BQ92688 251 aaKnown RBP12.23□□□□□ -0.45
CDK19-201ENST00000323817 PRXQ9BXM0 1461 aa12.22□□□□□ -0.45
CDK19-201ENST00000323817 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.45
CDK19-201ENST00000323817 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
CDK19-201ENST00000323817 ERICH3Q5RHP9 1530 aa12.19□□□□□ -0.46
CDK19-201ENST00000323817 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
CDK19-201ENST00000323817 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
CDK19-201ENST00000323817 CEP164Q9UPV0 1460 aa12.18□□□□□ -0.46
CDK19-201ENST00000323817 ABCA10Q8WWZ4 1543 aa12.17□□□□□ -0.46
CDK19-201ENST00000323817 GOLGA3Q08378 1498 aa12.16□□□□□ -0.46
CDK19-201ENST00000323817 CDK11BP21127 795 aaKnown RBP12.16□□□□□ -0.46
CDK19-201ENST00000323817 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
CDK19-201ENST00000323817 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.46
CDK19-201ENST00000323817 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
CDK19-201ENST00000323817 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
CDK19-201ENST00000323817 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
CDK19-201ENST00000323817 ABCA5Q8WWZ7 1642 aa12.13□□□□□ -0.47
CDK19-201ENST00000323817 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
CDK19-201ENST00000323817 KIF27Q86VH2 1401 aa12.11□□□□□ -0.47
CDK19-201ENST00000323817 IGF1RP08069 1367 aa12.1□□□□□ -0.47
CDK19-201ENST00000323817 WDR62O43379 1518 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms