RNA–Protein interactions for RNA: ENST00000413605.6

CDK19-203, Transcript of cyclin dependent kinase 19, humanhuman

TSL 1 (best) BASIC

Gene CDK19, Length 6,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK19-203ENST00000413605 NISCHQ9Y2I1 1504 aa13.25□□□□□ -0.29
CDK19-203ENST00000413605 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
CDK19-203ENST00000413605 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
CDK19-203ENST00000413605 PELP1Q8IZL8 1130 aaKnown RBP12.77□□□□□ -0.37
CDK19-203ENST00000413605 SUPT5HO00267 1087 aaKnown RBP12.73□□□□□ -0.37
CDK19-203ENST00000413605 MYT1Q01538 1121 aa12.54□□□□□ -0.4
CDK19-203ENST00000413605 TTBK1Q5TCY1 1321 aaPredicted RBP12.49□□□□□ -0.41
CDK19-203ENST00000413605 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
CDK19-203ENST00000413605 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
CDK19-203ENST00000413605 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
CDK19-203ENST00000413605 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
CDK19-203ENST00000413605 PPARGC1BQ86YN6 1023 aaKnown RBP12.17□□□□□ -0.46
CDK19-203ENST00000413605 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
CDK19-203ENST00000413605 CENPBP07199 599 aaPredicted RBP12.12□□□□□ -0.47
CDK19-203ENST00000413605 HRCP23327 699 aa12.12□□□□□ -0.47
CDK19-203ENST00000413605 ABCC9O60706 1549 aa11.97□□□□□ -0.49
CDK19-203ENST00000413605 RANGAP1P46060 587 aaPredicted RBP11.96□□□□□ -0.5
CDK19-203ENST00000413605 CCER1Q8TC90 406 aaPredicted RBP11.92□□□□□ -0.5
CDK19-203ENST00000413605 ZEB1P37275 1124 aaPredicted RBP11.8□□□□□ -0.52
CDK19-203ENST00000413605 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
CDK19-203ENST00000413605 CNGB1Q14028 1251 aaPredicted RBP11.71□□□□□ -0.54
CDK19-203ENST00000413605 APLP2Q06481 763 aa11.68□□□□□ -0.54
CDK19-203ENST00000413605 NEFLP07196 543 aa11.66□□□□□ -0.54
CDK19-203ENST00000413605 BCANQ96GW7 911 aa11.65□□□□□ -0.54
CDK19-203ENST00000413605 PABPN1Q86U42 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
CDK19-203ENST00000413605 SCAF1Q9H7N4 1312 aaKnown RBP11.61□□□□□ -0.55
CDK19-203ENST00000413605 MYT1LQ9UL68 1186 aa11.57□□□□□ -0.56
CDK19-203ENST00000413605 LOC105371045A0A1W2PR82 267 aa11.55□□□□□ -0.56
CDK19-203ENST00000413605 ATP1B4Q9UN42 357 aaPredicted RBP11.52□□□□□ -0.56
CDK19-203ENST00000413605 TRIM26Q12899 539 aaPredicted RBP11.52□□□□□ -0.56
CDK19-203ENST00000413605 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
CDK19-203ENST00000413605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
CDK19-203ENST00000413605 DIEXFQ68CQ4 756 aaKnown RBP11.46□□□□□ -0.58
CDK19-203ENST00000413605 POLR3GLQ9BT43 218 aa11.45□□□□□ -0.58
CDK19-203ENST00000413605 ITGAEP38570 1179 aa11.42□□□□□ -0.58
CDK19-203ENST00000413605 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
CDK19-203ENST00000413605 CHIC1Q5VXU3 224 aa11.39□□□□□ -0.59
CDK19-203ENST00000413605 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
CDK19-203ENST00000413605 BCL11AQ9H165 835 aa11.39□□□□□ -0.59
CDK19-203ENST00000413605 EIF5BO60841 1220 aaKnown RBP11.37□□□□□ -0.59
CDK19-203ENST00000413605 DAXXQ9UER7 740 aaPredicted RBP11.37□□□□□ -0.59
CDK19-203ENST00000413605 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
CDK19-203ENST00000413605 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
CDK19-203ENST00000413605 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
CDK19-203ENST00000413605 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.62
CDK19-203ENST00000413605 ZNF316A6NFI3 1004 aaPredicted RBP11.19□□□□□ -0.62
CDK19-203ENST00000413605 NBR1Q14596 966 aa11.15□□□□□ -0.62
CDK19-203ENST00000413605 ANP32EQ9BTT0 268 aa11.15□□□□□ -0.62
CDK19-203ENST00000413605 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
CDK19-203ENST00000413605 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
CDK19-203ENST00000413605 CLSPNQ9HAW4 1339 aa11.13□□□□□ -0.63
CDK19-203ENST00000413605 CCDC180Q9P1Z9 1646 aa11.12□□□□□ -0.63
CDK19-203ENST00000413605 ARXQ96QS3 562 aa11.12□□□□□ -0.63
CDK19-203ENST00000413605 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
CDK19-203ENST00000413605 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
CDK19-203ENST00000413605 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.64
CDK19-203ENST00000413605 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
CDK19-203ENST00000413605 FKBP8Q14318 412 aa11□□□□□ -0.65
CDK19-203ENST00000413605 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
CDK19-203ENST00000413605 IRX6P78412 446 aaPredicted RBP10.97□□□□□ -0.65
CDK19-203ENST00000413605 SCRIBQ14160 1630 aa10.97□□□□□ -0.65
CDK19-203ENST00000413605 RB1CC1Q8TDY2 1594 aa10.96□□□□□ -0.65
CDK19-203ENST00000413605 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
CDK19-203ENST00000413605 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
CDK19-203ENST00000413605 CDK11BP21127 795 aaKnown RBP10.92□□□□□ -0.66
CDK19-203ENST00000413605 GLIPR1L2Q4G1C9 344 aa10.91□□□□□ -0.66
CDK19-203ENST00000413605 A0A0G2JS52 829 aa10.91□□□□□ -0.66
CDK19-203ENST00000413605 ZCCHC6Q5VYS8 1495 aaKnown RBP10.9□□□□□ -0.66
CDK19-203ENST00000413605 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.89□□□□□ -0.67
CDK19-203ENST00000413605 CCDC136Q96JN2 1154 aa10.87□□□□□ -0.67
CDK19-203ENST00000413605 DCAF8L1A6NGE4 600 aa10.87□□□□□ -0.67
CDK19-203ENST00000413605 MIER1Q8N108 512 aa10.86□□□□□ -0.67
CDK19-203ENST00000413605 ZNF326Q5BKZ1 582 aaKnown RBP10.85□□□□□ -0.67
CDK19-203ENST00000413605 NACADO15069 1562 aa10.84□□□□□ -0.67
CDK19-203ENST00000413605 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
CDK19-203ENST00000413605 AMER1Q5JTC6 1135 aaPredicted RBP10.83□□□□□ -0.67
CDK19-203ENST00000413605 PLPPR3Q6T4P5 718 aa10.83□□□□□ -0.68
CDK19-203ENST00000413605 ANP32AP39687 249 aaKnown RBP10.82□□□□□ -0.68
CDK19-203ENST00000413605 SALL2Q9Y467 1007 aaPredicted RBP10.82□□□□□ -0.68
CDK19-203ENST00000413605 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
CDK19-203ENST00000413605 FAM50AQ14320 339 aaKnown RBP10.8□□□□□ -0.68
CDK19-203ENST00000413605 ANP32CO43423 234 aa10.78□□□□□ -0.68
CDK19-203ENST00000413605 DEKP35659 375 aaKnown RBP10.77□□□□□ -0.69
CDK19-203ENST00000413605 ZBTB47Q9UFB7 747 aaPredicted RBP10.77□□□□□ -0.69
CDK19-203ENST00000413605 ARID4BQ4LE39 1312 aaPredicted RBP10.76□□□□□ -0.69
CDK19-203ENST00000413605 HIRIP3Q9BW71 556 aaPredicted RBP10.76□□□□□ -0.69
CDK19-203ENST00000413605 TULP1O00294 542 aaPredicted RBP10.75□□□□□ -0.69
CDK19-203ENST00000413605 PRM3Q9NNZ6 103 aa10.75□□□□□ -0.69
CDK19-203ENST00000413605 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
CDK19-203ENST00000413605 HNRNPUQ00839 825 aaKnown RBP eCLIP10.7□□□□□ -0.7
CDK19-203ENST00000413605 FAM9BQ8IZU0 186 aa10.7□□□□□ -0.7
CDK19-203ENST00000413605 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
CDK19-203ENST00000413605 FBLN2P98095 1184 aa10.68□□□□□ -0.7
CDK19-203ENST00000413605 TSHZ2Q9NRE2 1034 aa10.67□□□□□ -0.7
CDK19-203ENST00000413605 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
CDK19-203ENST00000413605 CANXP27824 592 aaKnown RBP10.66□□□□□ -0.7
CDK19-203ENST00000413605 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
CDK19-203ENST00000413605 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
CDK19-203ENST00000413605 ARID3AQ99856 593 aa10.63□□□□□ -0.71
CDK19-203ENST00000413605 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms