RNA–Protein interactions for RNA: ENST00000368911.7

CDK19-202, Transcript of cyclin dependent kinase 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK19, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK19-202ENST00000368911 NISCHQ9Y2I1 1504 aa30.34■■■□□ 2.45
CDK19-202ENST00000368911 DCAF8L2P0C7V8 631 aa30.02■■■□□ 2.4
CDK19-202ENST00000368911 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
CDK19-202ENST00000368911 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
CDK19-202ENST00000368911 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.98
CDK19-202ENST00000368911 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
CDK19-202ENST00000368911 APLP2Q06481 763 aa26.54■■□□□ 1.84
CDK19-202ENST00000368911 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
CDK19-202ENST00000368911 TTBK1Q5TCY1 1321 aaPredicted RBP26.46■■□□□ 1.83
CDK19-202ENST00000368911 PCGF6Q9BYE7 350 aa26.38■■□□□ 1.81
CDK19-202ENST00000368911 RANGAP1P46060 587 aaPredicted RBP26.29■■□□□ 1.8
CDK19-202ENST00000368911 UBTFP17480 764 aaKnown RBP26.02■■□□□ 1.76
CDK19-202ENST00000368911 ABCC9O60706 1549 aa25.9■■□□□ 1.74
CDK19-202ENST00000368911 ATP1B4Q9UN42 357 aaPredicted RBP25.88■■□□□ 1.73
CDK19-202ENST00000368911 CCER1Q8TC90 406 aaPredicted RBP25.76■■□□□ 1.71
CDK19-202ENST00000368911 PPARGC1BQ86YN6 1023 aaKnown RBP25.73■■□□□ 1.71
CDK19-202ENST00000368911 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
CDK19-202ENST00000368911 ZEB1P37275 1124 aaPredicted RBP25.65■■□□□ 1.7
CDK19-202ENST00000368911 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
CDK19-202ENST00000368911 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
CDK19-202ENST00000368911 PELP1Q8IZL8 1130 aaKnown RBP25.45■■□□□ 1.67
CDK19-202ENST00000368911 TRIM26Q12899 539 aaPredicted RBP25.43■■□□□ 1.66
CDK19-202ENST00000368911 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.63
CDK19-202ENST00000368911 CCDC180Q9P1Z9 1646 aa25.19■■□□□ 1.62
CDK19-202ENST00000368911 CENPBP07199 599 aaPredicted RBP25.17■■□□□ 1.62
CDK19-202ENST00000368911 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
CDK19-202ENST00000368911 ITGAEP38570 1179 aa25.11■■□□□ 1.61
CDK19-202ENST00000368911 HRCP23327 699 aa25.06■■□□□ 1.6
CDK19-202ENST00000368911 HNRNPUL2Q1KMD3 747 aaKnown RBP25■■□□□ 1.59
CDK19-202ENST00000368911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25■■□□□ 1.59
CDK19-202ENST00000368911 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
CDK19-202ENST00000368911 MYT1LQ9UL68 1186 aa24.69■■□□□ 1.54
CDK19-202ENST00000368911 FAM50AQ14320 339 aaKnown RBP24.58■■□□□ 1.53
CDK19-202ENST00000368911 NEFLP07196 543 aa24.57■■□□□ 1.52
CDK19-202ENST00000368911 POLR3GLQ9BT43 218 aa24.53■■□□□ 1.52
CDK19-202ENST00000368911 CSRNP3Q8WYN3 585 aa24.46■■□□□ 1.51
CDK19-202ENST00000368911 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
CDK19-202ENST00000368911 RB1CC1Q8TDY2 1594 aa24.43■■□□□ 1.5
CDK19-202ENST00000368911 FBLN2P98095 1184 aa24.36■■□□□ 1.49
CDK19-202ENST00000368911 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
CDK19-202ENST00000368911 P3H3Q8IVL6 736 aa24.33■■□□□ 1.49
CDK19-202ENST00000368911 TRIM52Q96A61 297 aa24.3■■□□□ 1.48
CDK19-202ENST00000368911 DIEXFQ68CQ4 756 aaKnown RBP24.29■■□□□ 1.48
CDK19-202ENST00000368911 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
CDK19-202ENST00000368911 NACADO15069 1562 aa24.25■■□□□ 1.47
CDK19-202ENST00000368911 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
CDK19-202ENST00000368911 ARID3CA6NKF2 412 aa24.17■■□□□ 1.46
CDK19-202ENST00000368911 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
CDK19-202ENST00000368911 MYO15BQ96JP2 1530 aa24.04■■□□□ 1.44
CDK19-202ENST00000368911 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
CDK19-202ENST00000368911 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
CDK19-202ENST00000368911 ZNF316A6NFI3 1004 aaPredicted RBP23.88■■□□□ 1.41
CDK19-202ENST00000368911 ZNF777Q9ULD5 760 aaPredicted RBP23.87■■□□□ 1.41
CDK19-202ENST00000368911 BAZ1BQ9UIG0 1483 aaKnown RBP23.86■■□□□ 1.41
CDK19-202ENST00000368911 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
CDK19-202ENST00000368911 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
CDK19-202ENST00000368911 ANP32CO43423 234 aa23.75■■□□□ 1.39
CDK19-202ENST00000368911 CDK11AQ9UQ88 783 aaPredicted RBP23.75■■□□□ 1.39
CDK19-202ENST00000368911 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
CDK19-202ENST00000368911 CLIP1P30622 1438 aa23.71■■□□□ 1.39
CDK19-202ENST00000368911 GOLGA3Q08378 1498 aa23.67■■□□□ 1.38
CDK19-202ENST00000368911 EEA1Q15075 1411 aa23.63■■□□□ 1.37
CDK19-202ENST00000368911 CEP162Q5TB80 1403 aa23.63■■□□□ 1.37
CDK19-202ENST00000368911 GTF3C3Q9Y5Q9 886 aa23.6■■□□□ 1.37
CDK19-202ENST00000368911 DAXXQ9UER7 740 aaPredicted RBP23.59■■□□□ 1.37
CDK19-202ENST00000368911 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
CDK19-202ENST00000368911 BCANQ96GW7 911 aa23.55■■□□□ 1.36
CDK19-202ENST00000368911 CHIC2Q9UKJ5 165 aa23.55■■□□□ 1.36
CDK19-202ENST00000368911 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.35
CDK19-202ENST00000368911 TONSLQ96HA7 1378 aa23.51■■□□□ 1.35
CDK19-202ENST00000368911 MTUS2Q5JR59 1369 aa23.5■■□□□ 1.35
CDK19-202ENST00000368911 KIF27Q86VH2 1401 aa23.46■■□□□ 1.35
CDK19-202ENST00000368911 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
CDK19-202ENST00000368911 TNIKQ9UKE5 1360 aa23.43■■□□□ 1.34
CDK19-202ENST00000368911 CCDC88BA6NC98 1476 aa23.4■■□□□ 1.34
CDK19-202ENST00000368911 WIZO95785 1651 aa23.37■■□□□ 1.33
CDK19-202ENST00000368911 CLSPNQ9HAW4 1339 aa23.36■■□□□ 1.33
CDK19-202ENST00000368911 ACIN1Q9UKV3 1341 aaKnown RBP23.36■■□□□ 1.33
CDK19-202ENST00000368911 ABCC8Q09428 1581 aa23.36■■□□□ 1.33
CDK19-202ENST00000368911 SOGA1O94964 1423 aa23.35■■□□□ 1.33
CDK19-202ENST00000368911 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
CDK19-202ENST00000368911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.32
CDK19-202ENST00000368911 DDX10Q13206 875 aaKnown RBP23.3■■□□□ 1.32
CDK19-202ENST00000368911 MYT1Q01538 1121 aa23.29■■□□□ 1.32
CDK19-202ENST00000368911 CHGAP10645 457 aaKnown RBP23.28■■□□□ 1.32
CDK19-202ENST00000368911 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
CDK19-202ENST00000368911 SMARCA2P51531 1590 aa23.25■■□□□ 1.31
CDK19-202ENST00000368911 TSPY4P0CV99 314 aa23.23■■□□□ 1.31
CDK19-202ENST00000368911 TSPY10P0CW01 314 aa23.23■■□□□ 1.31
CDK19-202ENST00000368911 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
CDK19-202ENST00000368911 TOP2AP11388 1531 aaKnown RBP23.21■■□□□ 1.31
CDK19-202ENST00000368911 CUX2O14529 1486 aa23.19■■□□□ 1.3
CDK19-202ENST00000368911 ESF1Q9H501 851 aaKnown RBP23.15■■□□□ 1.3
CDK19-202ENST00000368911 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
CDK19-202ENST00000368911 KDM2AQ9Y2K7 1162 aa23.15■■□□□ 1.3
CDK19-202ENST00000368911 KCNH8Q96L42 1107 aa23.13■■□□□ 1.29
CDK19-202ENST00000368911 STAG3Q9UJ98 1225 aa23.12■■□□□ 1.29
CDK19-202ENST00000368911 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
CDK19-202ENST00000368911 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
CDK19-202ENST00000368911 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms