Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 KMT2E-203ENST00000334884 6840 ntTSL 515.39■□□□□ 0.052e-6■■■■■ 38.7
SF3B1O75533 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.012e-6■■■■■ 38.7
SF3B1O75533 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.052e-6■■■■■ 38.7
SF3B1O75533 ATP2C1-207ENST00000504612 3148 ntTSL 25.26□□□□□ -1.572e-6■■■■■ 38.6
SF3B1O75533 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.94■■□□□ 1.582e-6■■■■■ 38.6
SF3B1O75533 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.17■□□□□ 0.822e-6■■■■■ 38.6
SF3B1O75533 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.49■□□□□ 0.712e-6■■■■■ 38.6
SF3B1O75533 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.87■□□□□ 0.612e-6■■■■■ 38.6
SF3B1O75533 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.612e-6■■■■■ 38.6
SF3B1O75533 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.84■□□□□ 0.452e-6■■■■■ 38.6
SF3B1O75533 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.452e-6■■■■■ 38.6
SF3B1O75533 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.7□□□□□ -0.062e-6■■■■■ 38.6
SF3B1O75533 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.633e-7■■■■■ 38.6
SF3B1O75533 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.3□□□□□ -1.243e-7■■■■■ 38.6
SF3B1O75533 RPS3-213ENST00000529285 550 ntTSL 522.14■■□□□ 1.141e-6■■■■■ 38.6
SF3B1O75533 RPS3-206ENST00000526248 771 ntTSL 517.4■□□□□ 0.381e-6■■■■■ 38.6
SF3B1O75533 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.32■□□□□ 0.21e-6■■■■■ 38.6
SF3B1O75533 RPS3-216ENST00000530721 796 ntTSL 314.13□□□□□ -0.151e-6■■■■■ 38.6
SF3B1O75533 RPS3-218ENST00000532872 737 ntTSL 314.13□□□□□ -0.151e-6■■■■■ 38.6
SF3B1O75533 RPS3-212ENST00000529173 1373 ntTSL 513.82□□□□□ -0.21e-6■■■■■ 38.6
SF3B1O75533 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.391e-6■■■■■ 38.6
SF3B1O75533 RPS3-202ENST00000422465 903 ntTSL 210.73□□□□□ -0.691e-6■■■■■ 38.6
SF3B1O75533 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.691e-6■■■■■ 38.6
SF3B1O75533 RPS3-210ENST00000528439 473 ntTSL 310.61□□□□□ -0.711e-6■■■■■ 38.6
SF3B1O75533 RPS3-219ENST00000534440 564 ntTSL 2 BASIC10.61□□□□□ -0.711e-6■■■■■ 38.6
SF3B1O75533 RPS3-207ENST00000526608 710 ntTSL 5 BASIC9.97□□□□□ -0.811e-6■■■■■ 38.6
SF3B1O75533 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.02□□□□□ -1.772e-6■■■■■ 38.6
SF3B1O75533 PTBP1-209ENST00000586481 578 ntTSL 321.76■■□□□ 1.072e-6■■■■■ 38.6
SF3B1O75533 PTBP1-216ENST00000590887 642 ntTSL 313.71□□□□□ -0.212e-6■■■■■ 38.6
SF3B1O75533 HBG2-202ENST00000380252 694 ntTSL 3 BASIC11.45□□□□□ -0.582e-6■■■■■ 38.6
SF3B1O75533 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.833e-6■■■■■ 38.6
SF3B1O75533 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.383e-7■■■■■ 38.5
SF3B1O75533 AARSD1-204ENST00000436545 680 ntTSL 316.46■□□□□ 0.233e-7■■■■■ 38.5
SF3B1O75533 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.43■□□□□ 0.223e-7■■■■■ 38.5
SF3B1O75533 PTGES3L-AARSD1-205ENST00000423601 584 ntTSL 316.07■□□□□ 0.163e-7■■■■■ 38.5
SF3B1O75533 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.143e-7■■■■■ 38.5
SF3B1O75533 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.64■□□□□ 0.093e-7■■■■■ 38.5
SF3B1O75533 AARSD1-210ENST00000483774 928 ntTSL 1 (best)14.57□□□□□ -0.083e-7■■■■■ 38.5
SF3B1O75533 AARSD1-217ENST00000591910 726 ntTSL 313.88□□□□□ -0.193e-7■■■■■ 38.5
SF3B1O75533 AARSD1-205ENST00000441280 983 ntTSL 213.24□□□□□ -0.293e-7■■■■■ 38.5
SF3B1O75533 AARSD1-206ENST00000450475 783 ntTSL 513.18□□□□□ -0.33e-7■■■■■ 38.5
SF3B1O75533 AARSD1-203ENST00000430739 752 ntTSL 312.52□□□□□ -0.413e-7■■■■■ 38.5
SF3B1O75533 PTGES3L-AARSD1-203ENST00000409399 2042 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.553e-7■■■■■ 38.5
SF3B1O75533 AARSD1-201ENST00000416949 478 ntTSL 410.91□□□□□ -0.663e-7■■■■■ 38.5
SF3B1O75533 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.792e-6■■■■■ 38.5
SF3B1O75533 SUN1-206ENST00000413171 4488 ntTSL 511.67□□□□□ -0.544e-6■■■■■ 38.5
SF3B1O75533 SUN1-212ENST00000429178 3701 ntTSL 1 (best)11.18□□□□□ -0.624e-6■■■■■ 38.5
SF3B1O75533 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.764e-6■■■■■ 38.5
SF3B1O75533 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC10□□□□□ -0.814e-6■■■■■ 38.5
SF3B1O75533 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.844e-6■■■■■ 38.5
SF3B1O75533 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.894e-6■■■■■ 38.5
SF3B1O75533 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.34□□□□□ -0.914e-6■■■■■ 38.5
SF3B1O75533 ZNF692-225ENST00000533614 553 ntTSL 425.17■■□□□ 1.621e-6■■■■■ 38.5
SF3B1O75533 ZNF692-218ENST00000496053 694 ntTSL 320.27■□□□□ 0.831e-6■■■■■ 38.5
SF3B1O75533 ZNF692-223ENST00000530699 896 ntTSL 1 (best)18.36■□□□□ 0.531e-6■■■■■ 38.5
SF3B1O75533 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.23■□□□□ 0.997e-7■■■■■ 38.4
SF3B1O75533 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.497e-7■■■■■ 38.4
SF3B1O75533 LEPROT-205ENST00000497874 377 ntTSL 1 (best)18.83■□□□□ 0.613e-7■■■■■ 38.4
SF3B1O75533 LEPROT-203ENST00000484243 549 ntTSL 34.11□□□□□ -1.753e-7■■■■■ 38.4
SF3B1O75533 ESYT2-204ENST00000483958 546 ntTSL 47.93□□□□□ -1.146e-6■■■■■ 38.4
SF3B1O75533 TELO2-206ENST00000567427 634 ntTSL 321.87■■□□□ 1.095e-6■■■■■ 38.4
SF3B1O75533 TELO2-208ENST00000569744 575 ntTSL 519.3■□□□□ 0.685e-6■■■■■ 38.4
SF3B1O75533 TELO2-207ENST00000568240 1327 ntTSL 1 (best)17.9■□□□□ 0.465e-6■■■■■ 38.4
SF3B1O75533 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.334e-6■■■■■ 38.3
SF3B1O75533 TNFRSF12A-207ENST00000575836 161 ntTSL 316.74■□□□□ 0.272e-6■■■■■ 38.3
SF3B1O75533 UBE2H-209ENST00000496698 561 ntTSL 45.86□□□□□ -1.475e-7■■■■■ 38.3
SF3B1O75533 MSMO1-205ENST00000507013 973 ntTSL 223.42■■□□□ 1.342e-11■■■■■ 38.3
SF3B1O75533 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.34■□□□□ 0.372e-11■■■■■ 38.3
SF3B1O75533 RBBP4-218ENST00000527118 700 ntTSL 317.15■□□□□ 0.342e-11■■■■■ 38.3
SF3B1O75533 RBBP4-205ENST00000445722 580 ntTSL 216■□□□□ 0.152e-11■■■■■ 38.3
SF3B1O75533 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.042e-11■■■■■ 38.3
SF3B1O75533 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.052e-11■■■■■ 38.3
SF3B1O75533 RBBP4-203ENST00000401893 762 ntTSL 213.84□□□□□ -0.192e-11■■■■■ 38.3
SF3B1O75533 RBBP4-215ENST00000524393 583 ntTSL 313.84□□□□□ -0.192e-11■■■■■ 38.3
SF3B1O75533 RBBP4-213ENST00000490500 632 ntTSL 313.69□□□□□ -0.222e-11■■■■■ 38.3
SF3B1O75533 RBBP4-209ENST00000465780 690 ntTSL 211.6□□□□□ -0.552e-11■■■■■ 38.3
SF3B1O75533 RBBP4-216ENST00000525506 501 ntTSL 211.43□□□□□ -0.582e-11■■■■■ 38.3
SF3B1O75533 RBBP4-201ENST00000373485 1417 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.822e-11■■■■■ 38.3
SF3B1O75533 RBBP4-217ENST00000526193 568 ntTSL 49.41□□□□□ -0.92e-11■■■■■ 38.3
SF3B1O75533 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.61□□□□□ -1.032e-11■■■■■ 38.3
SF3B1O75533 RBBP4-211ENST00000477563 544 ntTSL 58.49□□□□□ -1.052e-11■■■■■ 38.3
SF3B1O75533 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.062e-11■■■■■ 38.3
SF3B1O75533 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.192e-11■■■■■ 38.3
SF3B1O75533 RBBP4-214ENST00000492348 1547 ntTSL 27.31□□□□□ -1.242e-11■■■■■ 38.3
SF3B1O75533 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.68□□□□□ -1.662e-11■■■■■ 38.3
SF3B1O75533 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC13.81□□□□□ -0.23e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.82□□□□□ -0.363e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.393e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-206ENST00000524698 1933 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.513e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-217ENST00000527688 3858 ntTSL 210.54□□□□□ -0.723e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC9.58□□□□□ -0.883e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC9.07□□□□□ -0.963e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.52□□□□□ -1.053e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.293e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.87□□□□□ -1.313e-6■■■■■ 38.3
SF3B1O75533 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.71□□□□□ -1.333e-6■■■■■ 38.3
SF3B1O75533 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.11■■□□□ 1.134e-6■■■■■ 38.3
SF3B1O75533 TCF12-210ENST00000558908 553 ntTSL 420.93■□□□□ 0.944e-6■■■■■ 38.3
SF3B1O75533 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.44e-6■■■■■ 38.3
SF3B1O75533 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.19□□□□□ -1.264e-6■■■■■ 38.3
Retrieved 100 of 46,956 protein–RNA pairs in 3704.3 ms