RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-209ENST00000465780 NISCHQ9Y2I1 1504 aa25.85■■□□□ 1.73
RBBP4-209ENST00000465780 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
RBBP4-209ENST00000465780 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
RBBP4-209ENST00000465780 CCDC180Q9P1Z9 1646 aa23■■□□□ 1.27
RBBP4-209ENST00000465780 ABCC9O60706 1549 aa22.37■■□□□ 1.17
RBBP4-209ENST00000465780 NACADO15069 1562 aa21.61■■□□□ 1.05
RBBP4-209ENST00000465780 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
RBBP4-209ENST00000465780 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
RBBP4-209ENST00000465780 ZCCHC6Q5VYS8 1495 aaKnown RBP21.54■■□□□ 1.04
RBBP4-209ENST00000465780 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
RBBP4-209ENST00000465780 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
RBBP4-209ENST00000465780 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
RBBP4-209ENST00000465780 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
RBBP4-209ENST00000465780 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
RBBP4-209ENST00000465780 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
RBBP4-209ENST00000465780 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
RBBP4-209ENST00000465780 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
RBBP4-209ENST00000465780 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
RBBP4-209ENST00000465780 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
RBBP4-209ENST00000465780 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
RBBP4-209ENST00000465780 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
RBBP4-209ENST00000465780 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
RBBP4-209ENST00000465780 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
RBBP4-209ENST00000465780 SMARCA2P51531 1590 aa19.93■□□□□ 0.78
RBBP4-209ENST00000465780 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
RBBP4-209ENST00000465780 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
RBBP4-209ENST00000465780 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
RBBP4-209ENST00000465780 PEG3Q9GZU2 1588 aa19.89■□□□□ 0.77
RBBP4-209ENST00000465780 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
RBBP4-209ENST00000465780 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
RBBP4-209ENST00000465780 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
RBBP4-209ENST00000465780 WIZO95785 1651 aa19.67■□□□□ 0.74
RBBP4-209ENST00000465780 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
RBBP4-209ENST00000465780 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
RBBP4-209ENST00000465780 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
RBBP4-209ENST00000465780 NESP48681 1621 aa19.36■□□□□ 0.69
RBBP4-209ENST00000465780 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.69
RBBP4-209ENST00000465780 ERCC6Q03468 1493 aa19.3■□□□□ 0.68
RBBP4-209ENST00000465780 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
RBBP4-209ENST00000465780 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
RBBP4-209ENST00000465780 CFTRP13569 1480 aa19.23■□□□□ 0.67
RBBP4-209ENST00000465780 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
RBBP4-209ENST00000465780 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
RBBP4-209ENST00000465780 CUX2O14529 1486 aa19.14■□□□□ 0.65
RBBP4-209ENST00000465780 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
RBBP4-209ENST00000465780 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
RBBP4-209ENST00000465780 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
RBBP4-209ENST00000465780 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
RBBP4-209ENST00000465780 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
RBBP4-209ENST00000465780 MRC2Q9UBG0 1479 aa19.04■□□□□ 0.64
RBBP4-209ENST00000465780 WDR62O43379 1518 aa19■□□□□ 0.63
RBBP4-209ENST00000465780 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
RBBP4-209ENST00000465780 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
RBBP4-209ENST00000465780 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
RBBP4-209ENST00000465780 TOPBP1Q92547 1522 aa18.8■□□□□ 0.6
RBBP4-209ENST00000465780 IFT140Q96RY7 1462 aa18.7■□□□□ 0.58
RBBP4-209ENST00000465780 CUX1P39880 1505 aa18.66■□□□□ 0.58
RBBP4-209ENST00000465780 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
RBBP4-209ENST00000465780 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
RBBP4-209ENST00000465780 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
RBBP4-209ENST00000465780 SOGA1O94964 1423 aa18.57■□□□□ 0.56
RBBP4-209ENST00000465780 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
RBBP4-209ENST00000465780 ZNF608Q9ULD9 1512 aaPredicted RBP18.56■□□□□ 0.56
RBBP4-209ENST00000465780 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
RBBP4-209ENST00000465780 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
RBBP4-209ENST00000465780 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
RBBP4-209ENST00000465780 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
RBBP4-209ENST00000465780 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
RBBP4-209ENST00000465780 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
RBBP4-209ENST00000465780 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
RBBP4-209ENST00000465780 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.541e-11■■■■■ 61.7
RBBP4-209ENST00000465780 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
RBBP4-209ENST00000465780 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
RBBP4-209ENST00000465780 ABCA5Q8WWZ7 1642 aa18.37■□□□□ 0.53
RBBP4-209ENST00000465780 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
RBBP4-209ENST00000465780 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
RBBP4-209ENST00000465780 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
RBBP4-209ENST00000465780 PBRM1Q86U86 1689 aa18.32■□□□□ 0.52
RBBP4-209ENST00000465780 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
RBBP4-209ENST00000465780 FOXD1Q16676 465 aa18.31■□□□□ 0.52
RBBP4-209ENST00000465780 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
RBBP4-209ENST00000465780 CHD1O14646 1710 aa18.27■□□□□ 0.52
RBBP4-209ENST00000465780 ERICH3Q5RHP9 1530 aa18.24■□□□□ 0.51
RBBP4-209ENST00000465780 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
RBBP4-209ENST00000465780 FBLN2P98095 1184 aa18.2■□□□□ 0.5
RBBP4-209ENST00000465780 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
RBBP4-209ENST00000465780 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
RBBP4-209ENST00000465780 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
RBBP4-209ENST00000465780 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
RBBP4-209ENST00000465780 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
RBBP4-209ENST00000465780 ADRA2BP18089 450 aa18.15■□□□□ 0.5
RBBP4-209ENST00000465780 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
RBBP4-209ENST00000465780 GRIN2AQ12879 1464 aa18.11■□□□□ 0.49
RBBP4-209ENST00000465780 IGF1RP08069 1367 aa18.1■□□□□ 0.49
RBBP4-209ENST00000465780 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
RBBP4-209ENST00000465780 CUL7Q14999 1698 aa18.09■□□□□ 0.49
RBBP4-209ENST00000465780 NUP160Q12769 1436 aa18.05■□□□□ 0.48
RBBP4-209ENST00000465780 ARHGEF11O15085 1522 aa18.02■□□□□ 0.47
RBBP4-209ENST00000465780 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
RBBP4-209ENST00000465780 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms