RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
RBBP4-211ENST00000477563 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
RBBP4-211ENST00000477563 NISCHQ9Y2I1 1504 aa19.62■□□□□ 0.73
RBBP4-211ENST00000477563 ABCC9O60706 1549 aa17.82■□□□□ 0.44
RBBP4-211ENST00000477563 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
RBBP4-211ENST00000477563 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
RBBP4-211ENST00000477563 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
RBBP4-211ENST00000477563 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
RBBP4-211ENST00000477563 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
RBBP4-211ENST00000477563 NACADO15069 1562 aa16.81■□□□□ 0.28
RBBP4-211ENST00000477563 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
RBBP4-211ENST00000477563 MYO15BQ96JP2 1530 aa16.58■□□□□ 0.24
RBBP4-211ENST00000477563 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
RBBP4-211ENST00000477563 BICRAQ9NZM4 1560 aa16.5■□□□□ 0.23
RBBP4-211ENST00000477563 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
RBBP4-211ENST00000477563 FOXD1Q16676 465 aa16.39■□□□□ 0.21
RBBP4-211ENST00000477563 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
RBBP4-211ENST00000477563 DCAF1Q9Y4B6 1507 aa16.27■□□□□ 0.2
RBBP4-211ENST00000477563 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
RBBP4-211ENST00000477563 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
RBBP4-211ENST00000477563 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
RBBP4-211ENST00000477563 EIF4G1Q04637 1599 aaKnown RBP16.08■□□□□ 0.16
RBBP4-211ENST00000477563 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
RBBP4-211ENST00000477563 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
RBBP4-211ENST00000477563 DNAJC5Q9H3Z4 198 aa15.73■□□□□ 0.11
RBBP4-211ENST00000477563 CUX2O14529 1486 aa15.53■□□□□ 0.08
RBBP4-211ENST00000477563 NCAPD3P42695 1498 aa15.52■□□□□ 0.08
RBBP4-211ENST00000477563 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
RBBP4-211ENST00000477563 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
RBBP4-211ENST00000477563 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
RBBP4-211ENST00000477563 ADRA2BP18089 450 aa15.39■□□□□ 0.05
RBBP4-211ENST00000477563 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
RBBP4-211ENST00000477563 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
RBBP4-211ENST00000477563 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
RBBP4-211ENST00000477563 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
RBBP4-211ENST00000477563 MSH5O43196 834 aa15.28■□□□□ 0.04
RBBP4-211ENST00000477563 NESP48681 1621 aa15.27■□□□□ 0.03
RBBP4-211ENST00000477563 PEG3Q9GZU2 1588 aa15.27■□□□□ 0.03
RBBP4-211ENST00000477563 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
RBBP4-211ENST00000477563 THOC2Q8NI27 1593 aaKnown RBP15.23■□□□□ 0.03
RBBP4-211ENST00000477563 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
RBBP4-211ENST00000477563 LAMC3Q9Y6N6 1575 aa15.21■□□□□ 0.03
RBBP4-211ENST00000477563 KIF21AQ7Z4S6 1674 aa15.11■□□□□ 0.01
RBBP4-211ENST00000477563 MROH2BQ7Z745 1585 aa15.09■□□□□ 0.01
RBBP4-211ENST00000477563 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
RBBP4-211ENST00000477563 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
RBBP4-211ENST00000477563 WDR62O43379 1518 aa14.97□□□□□ -0.01
RBBP4-211ENST00000477563 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
RBBP4-211ENST00000477563 WIZO95785 1651 aa14.9□□□□□ -0.02
RBBP4-211ENST00000477563 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
RBBP4-211ENST00000477563 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
RBBP4-211ENST00000477563 CFTRP13569 1480 aa14.81□□□□□ -0.04
RBBP4-211ENST00000477563 FANCD2Q9BXW9 1451 aa14.81□□□□□ -0.04
RBBP4-211ENST00000477563 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
RBBP4-211ENST00000477563 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.06
RBBP4-211ENST00000477563 URB2Q14146 1524 aaKnown RBP14.71□□□□□ -0.06
RBBP4-211ENST00000477563 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
RBBP4-211ENST00000477563 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
RBBP4-211ENST00000477563 POTEDQ86YR6 584 aa14.65□□□□□ -0.06
RBBP4-211ENST00000477563 RIMBP3CA6NJZ7 1639 aa14.6□□□□□ -0.07
RBBP4-211ENST00000477563 RIMBP3BA6NNM3 1639 aa14.6□□□□□ -0.07
RBBP4-211ENST00000477563 RIMBP3Q9UFD9 1639 aa14.6□□□□□ -0.07
RBBP4-211ENST00000477563 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
RBBP4-211ENST00000477563 ZNF608Q9ULD9 1512 aaPredicted RBP14.55□□□□□ -0.08
RBBP4-211ENST00000477563 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
RBBP4-211ENST00000477563 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
RBBP4-211ENST00000477563 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
RBBP4-211ENST00000477563 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
RBBP4-211ENST00000477563 EIF4G3O43432 1585 aaKnown RBP14.48□□□□□ -0.09
RBBP4-211ENST00000477563 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
RBBP4-211ENST00000477563 TARBP1Q13395 1621 aaKnown RBP14.45□□□□□ -0.1
RBBP4-211ENST00000477563 CHD1O14646 1710 aa14.43□□□□□ -0.1
RBBP4-211ENST00000477563 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.112e-9■■■■■ 61.7
RBBP4-211ENST00000477563 POLA1P09884 1462 aaPredicted RBP14.36□□□□□ -0.11
RBBP4-211ENST00000477563 CYB5RLQ6IPT4 315 aa14.35□□□□□ -0.11
RBBP4-211ENST00000477563 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
RBBP4-211ENST00000477563 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
RBBP4-211ENST00000477563 CLASP1Q7Z460 1538 aa14.28□□□□□ -0.12
RBBP4-211ENST00000477563 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
RBBP4-211ENST00000477563 SOGA1O94964 1423 aa14.26□□□□□ -0.13
RBBP4-211ENST00000477563 FBLN2P98095 1184 aa14.23□□□□□ -0.13
RBBP4-211ENST00000477563 SNAPC4Q5SXM2 1469 aa14.23□□□□□ -0.13
RBBP4-211ENST00000477563 MAGI1Q96QZ7 1491 aaPredicted RBP14.23□□□□□ -0.13
RBBP4-211ENST00000477563 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
RBBP4-211ENST00000477563 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
RBBP4-211ENST00000477563 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.13
RBBP4-211ENST00000477563 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
RBBP4-211ENST00000477563 CUX1P39880 1505 aa14.19□□□□□ -0.14
RBBP4-211ENST00000477563 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
RBBP4-211ENST00000477563 SYNJ2O15056 1496 aa14.17□□□□□ -0.14
RBBP4-211ENST00000477563 PBRM1Q86U86 1689 aa14.15□□□□□ -0.14
RBBP4-211ENST00000477563 CHMP7Q8WUX9 453 aaPredicted RBP14.15□□□□□ -0.14
RBBP4-211ENST00000477563 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
RBBP4-211ENST00000477563 ABCA5Q8WWZ7 1642 aa14.1□□□□□ -0.15
RBBP4-211ENST00000477563 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
RBBP4-211ENST00000477563 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
RBBP4-211ENST00000477563 ABCA10Q8WWZ4 1543 aa14.09□□□□□ -0.15
RBBP4-211ENST00000477563 GRIN2AQ12879 1464 aa14□□□□□ -0.17
RBBP4-211ENST00000477563 NUP160Q12769 1436 aa13.99□□□□□ -0.17
RBBP4-211ENST00000477563 SHROOM2Q13796 1616 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms