RNA–Protein interactions for RNA: ENST00000524851.5

RPS3-203, Transcript of ribosomal protein S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3, Length 866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-203ENST00000524851 NISCHQ9Y2I1 1504 aa24.23■■□□□ 1.47
RPS3-203ENST00000524851 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
RPS3-203ENST00000524851 ABCC9O60706 1549 aa21.56■■□□□ 1.04
RPS3-203ENST00000524851 RB1CC1Q8TDY2 1594 aa20.66■□□□□ 0.9
RPS3-203ENST00000524851 NACADO15069 1562 aa20.55■□□□□ 0.88
RPS3-203ENST00000524851 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
RPS3-203ENST00000524851 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
RPS3-203ENST00000524851 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
RPS3-203ENST00000524851 ZCCHC6Q5VYS8 1495 aaKnown RBP20.14■□□□□ 0.81
RPS3-203ENST00000524851 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
RPS3-203ENST00000524851 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
RPS3-203ENST00000524851 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
RPS3-203ENST00000524851 BICRAQ9NZM4 1560 aa19.98■□□□□ 0.79
RPS3-203ENST00000524851 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
RPS3-203ENST00000524851 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
RPS3-203ENST00000524851 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
RPS3-203ENST00000524851 CC2D2AQ9P2K1 1620 aa19.5■□□□□ 0.71
RPS3-203ENST00000524851 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
RPS3-203ENST00000524851 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
RPS3-203ENST00000524851 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
RPS3-203ENST00000524851 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
RPS3-203ENST00000524851 SMARCA2P51531 1590 aa18.89■□□□□ 0.61
RPS3-203ENST00000524851 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
RPS3-203ENST00000524851 HMGXB3Q12766 1538 aa18.86■□□□□ 0.61
RPS3-203ENST00000524851 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
RPS3-203ENST00000524851 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
RPS3-203ENST00000524851 BAZ1BQ9UIG0 1483 aaKnown RBP18.72■□□□□ 0.59
RPS3-203ENST00000524851 CUX2O14529 1486 aa18.69■□□□□ 0.58
RPS3-203ENST00000524851 ERCC6Q03468 1493 aa18.68■□□□□ 0.58
RPS3-203ENST00000524851 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
RPS3-203ENST00000524851 MROH2BQ7Z745 1585 aa18.62■□□□□ 0.57
RPS3-203ENST00000524851 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
RPS3-203ENST00000524851 NESP48681 1621 aa18.52■□□□□ 0.56
RPS3-203ENST00000524851 LAMC3Q9Y6N6 1575 aa18.52■□□□□ 0.56
RPS3-203ENST00000524851 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
RPS3-203ENST00000524851 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
RPS3-203ENST00000524851 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
RPS3-203ENST00000524851 WIZO95785 1651 aa18.34■□□□□ 0.53
RPS3-203ENST00000524851 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
RPS3-203ENST00000524851 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
RPS3-203ENST00000524851 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
RPS3-203ENST00000524851 TOP2AP11388 1531 aaKnown RBP18.25■□□□□ 0.51
RPS3-203ENST00000524851 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
RPS3-203ENST00000524851 WDR62O43379 1518 aa18.22■□□□□ 0.51
RPS3-203ENST00000524851 CFTRP13569 1480 aa18.2■□□□□ 0.5
RPS3-203ENST00000524851 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
RPS3-203ENST00000524851 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
RPS3-203ENST00000524851 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
RPS3-203ENST00000524851 URB2Q14146 1524 aaKnown RBP17.97■□□□□ 0.47
RPS3-203ENST00000524851 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
RPS3-203ENST00000524851 ABCC8Q09428 1581 aa17.84■□□□□ 0.45
RPS3-203ENST00000524851 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
RPS3-203ENST00000524851 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
RPS3-203ENST00000524851 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
RPS3-203ENST00000524851 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
RPS3-203ENST00000524851 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
RPS3-203ENST00000524851 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
RPS3-203ENST00000524851 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
RPS3-203ENST00000524851 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
RPS3-203ENST00000524851 WDR97A6NE52 1622 aa17.58■□□□□ 0.41
RPS3-203ENST00000524851 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.41e-7■■■■■ 28
RPS3-203ENST00000524851 FGD5Q6ZNL6 1462 aa17.53■□□□□ 0.4
RPS3-203ENST00000524851 SOGA1O94964 1423 aa17.53■□□□□ 0.4
RPS3-203ENST00000524851 CUX1P39880 1505 aa17.51■□□□□ 0.39
RPS3-203ENST00000524851 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
RPS3-203ENST00000524851 ARHGEF11O15085 1522 aa17.5■□□□□ 0.39
RPS3-203ENST00000524851 RIMBP3CA6NJZ7 1639 aa17.49■□□□□ 0.39
RPS3-203ENST00000524851 RIMBP3BA6NNM3 1639 aa17.49■□□□□ 0.39
RPS3-203ENST00000524851 RIMBP3Q9UFD9 1639 aa17.49■□□□□ 0.39
RPS3-203ENST00000524851 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
RPS3-203ENST00000524851 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
RPS3-203ENST00000524851 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
RPS3-203ENST00000524851 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
RPS3-203ENST00000524851 CHD1O14646 1710 aa17.42■□□□□ 0.38
RPS3-203ENST00000524851 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
RPS3-203ENST00000524851 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
RPS3-203ENST00000524851 FBLN2P98095 1184 aa17.37■□□□□ 0.37
RPS3-203ENST00000524851 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
RPS3-203ENST00000524851 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
RPS3-203ENST00000524851 CLASP1Q7Z460 1538 aa17.35■□□□□ 0.37
RPS3-203ENST00000524851 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
RPS3-203ENST00000524851 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
RPS3-203ENST00000524851 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
RPS3-203ENST00000524851 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
RPS3-203ENST00000524851 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.368e-7■□□□□ 9.9
RPS3-203ENST00000524851 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
RPS3-203ENST00000524851 PBRM1Q86U86 1689 aa17.27■□□□□ 0.36
RPS3-203ENST00000524851 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
RPS3-203ENST00000524851 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
RPS3-203ENST00000524851 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
RPS3-203ENST00000524851 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
RPS3-203ENST00000524851 GRIN2AQ12879 1464 aa17.19■□□□□ 0.34
RPS3-203ENST00000524851 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
RPS3-203ENST00000524851 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
RPS3-203ENST00000524851 NUP160Q12769 1436 aa17.15■□□□□ 0.34
RPS3-203ENST00000524851 CEP170Q5SW79 1584 aa17.08■□□□□ 0.32
RPS3-203ENST00000524851 SHROOM2Q13796 1616 aa17.04■□□□□ 0.32
RPS3-203ENST00000524851 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
RPS3-203ENST00000524851 KIF27Q86VH2 1401 aa16.97■□□□□ 0.31
RPS3-203ENST00000524851 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms