RNA–Protein interactions for RNA: ENST00000529173.5

RPS3-212, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-212ENST00000529173 NISCHQ9Y2I1 1504 aa29.19■■■□□ 2.26
RPS3-212ENST00000529173 CCDC180Q9P1Z9 1646 aa25.46■■□□□ 1.67
RPS3-212ENST00000529173 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
RPS3-212ENST00000529173 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
RPS3-212ENST00000529173 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
RPS3-212ENST00000529173 SHROOM4Q9ULL8 1493 aa23.83■■□□□ 1.41
RPS3-212ENST00000529173 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
RPS3-212ENST00000529173 NACADO15069 1562 aa23.59■■□□□ 1.37
RPS3-212ENST00000529173 ABCC9O60706 1549 aa23.51■■□□□ 1.35
RPS3-212ENST00000529173 RB1CC1Q8TDY2 1594 aa23.3■■□□□ 1.32
RPS3-212ENST00000529173 SCRIBQ14160 1630 aa23.27■■□□□ 1.32
RPS3-212ENST00000529173 SUPT5HO00267 1087 aaKnown RBP23.14■■□□□ 1.29
RPS3-212ENST00000529173 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
RPS3-212ENST00000529173 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
RPS3-212ENST00000529173 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
RPS3-212ENST00000529173 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
RPS3-212ENST00000529173 MROH2BQ7Z745 1585 aa22.47■■□□□ 1.19
RPS3-212ENST00000529173 BICRAQ9NZM4 1560 aa22.43■■□□□ 1.18
RPS3-212ENST00000529173 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
RPS3-212ENST00000529173 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
RPS3-212ENST00000529173 WIZO95785 1651 aa22.32■■□□□ 1.16
RPS3-212ENST00000529173 TOP2AP11388 1531 aaKnown RBP22.23■■□□□ 1.15
RPS3-212ENST00000529173 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
RPS3-212ENST00000529173 PABPN1Q86U42 306 aaKnown RBP eCLIP22.14■■□□□ 1.14
RPS3-212ENST00000529173 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
RPS3-212ENST00000529173 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
RPS3-212ENST00000529173 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
RPS3-212ENST00000529173 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
RPS3-212ENST00000529173 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
RPS3-212ENST00000529173 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
RPS3-212ENST00000529173 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
RPS3-212ENST00000529173 NCAPD3P42695 1498 aa21.7■■□□□ 1.06
RPS3-212ENST00000529173 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
RPS3-212ENST00000529173 EEA1Q15075 1411 aa21.47■■□□□ 1.03
RPS3-212ENST00000529173 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.028e-7■□□□□ 9.9
RPS3-212ENST00000529173 LOC105371045A0A1W2PR82 267 aa21.38■■□□□ 1.01
RPS3-212ENST00000529173 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
RPS3-212ENST00000529173 PRDM2Q13029 1718 aa21.33■■□□□ 1
RPS3-212ENST00000529173 CFTRP13569 1480 aa21.3■■□□□ 1
RPS3-212ENST00000529173 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
RPS3-212ENST00000529173 SYNJ1O43426 1573 aa21.27■■□□□ 1
RPS3-212ENST00000529173 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
RPS3-212ENST00000529173 BIVM-ERCC5R4GMW8 1640 aa21.24■□□□□ 0.99
RPS3-212ENST00000529173 SOGA1O94964 1423 aa21.14■□□□□ 0.97
RPS3-212ENST00000529173 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
RPS3-212ENST00000529173 CSRNP3Q8WYN3 585 aa21.11■□□□□ 0.97
RPS3-212ENST00000529173 GOLGA3Q08378 1498 aa21.1■□□□□ 0.97
RPS3-212ENST00000529173 KIF21BO75037 1637 aa21.09■□□□□ 0.97
RPS3-212ENST00000529173 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
RPS3-212ENST00000529173 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
RPS3-212ENST00000529173 CUX1P39880 1505 aa21.03■□□□□ 0.96
RPS3-212ENST00000529173 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
RPS3-212ENST00000529173 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
RPS3-212ENST00000529173 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
RPS3-212ENST00000529173 CEP162Q5TB80 1403 aa20.92■□□□□ 0.94
RPS3-212ENST00000529173 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
RPS3-212ENST00000529173 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
RPS3-212ENST00000529173 FANCD2Q9BXW9 1451 aa20.9■□□□□ 0.94
RPS3-212ENST00000529173 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
RPS3-212ENST00000529173 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
RPS3-212ENST00000529173 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
RPS3-212ENST00000529173 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
RPS3-212ENST00000529173 PRXQ9BXM0 1461 aa20.8■□□□□ 0.92
RPS3-212ENST00000529173 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
RPS3-212ENST00000529173 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
RPS3-212ENST00000529173 RAPGEF2Q9Y4G8 1499 aa20.75■□□□□ 0.91
RPS3-212ENST00000529173 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
RPS3-212ENST00000529173 CUX2O14529 1486 aa20.71■□□□□ 0.91
RPS3-212ENST00000529173 CLIP1P30622 1438 aa20.71■□□□□ 0.91
RPS3-212ENST00000529173 NESP48681 1621 aa20.7■□□□□ 0.9
RPS3-212ENST00000529173 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
RPS3-212ENST00000529173 HRCP23327 699 aa20.63■□□□□ 0.89
RPS3-212ENST00000529173 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
RPS3-212ENST00000529173 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
RPS3-212ENST00000529173 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
RPS3-212ENST00000529173 CUL7Q14999 1698 aa20.58■□□□□ 0.88
RPS3-212ENST00000529173 IGF1RP08069 1367 aa20.57■□□□□ 0.88
RPS3-212ENST00000529173 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
RPS3-212ENST00000529173 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
RPS3-212ENST00000529173 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
RPS3-212ENST00000529173 MRC2Q9UBG0 1479 aa20.47■□□□□ 0.87
RPS3-212ENST00000529173 RAD54L2Q9Y4B4 1467 aa20.47■□□□□ 0.87
RPS3-212ENST00000529173 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
RPS3-212ENST00000529173 APLP2Q06481 763 aa20.46■□□□□ 0.87
RPS3-212ENST00000529173 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
RPS3-212ENST00000529173 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
RPS3-212ENST00000529173 GAPVD1Q14C86 1478 aa20.38■□□□□ 0.85
RPS3-212ENST00000529173 TARBP1Q13395 1621 aaKnown RBP20.37■□□□□ 0.85
RPS3-212ENST00000529173 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
RPS3-212ENST00000529173 ARHGAP35Q9NRY4 1499 aa20.35■□□□□ 0.85
RPS3-212ENST00000529173 EFCAB5A4FU69 1503 aa20.35■□□□□ 0.85
RPS3-212ENST00000529173 WDR62O43379 1518 aa20.35■□□□□ 0.85
RPS3-212ENST00000529173 CTTNBP2Q8WZ74 1663 aa20.35■□□□□ 0.85
RPS3-212ENST00000529173 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
RPS3-212ENST00000529173 PPARGC1BQ86YN6 1023 aaKnown RBP20.3■□□□□ 0.84
RPS3-212ENST00000529173 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
RPS3-212ENST00000529173 MAP3K1Q13233 1512 aa20.27■□□□□ 0.84
RPS3-212ENST00000529173 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
RPS3-212ENST00000529173 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
RPS3-212ENST00000529173 RANGAP1P46060 587 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms