RNA–Protein interactions for RNA: ENST00000606719.5

CSNK1A1-210, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-210ENST00000606719 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
CSNK1A1-210ENST00000606719 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
CSNK1A1-210ENST00000606719 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
CSNK1A1-210ENST00000606719 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
CSNK1A1-210ENST00000606719 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.11
CSNK1A1-210ENST00000606719 FOXD1Q16676 465 aa15.37■□□□□ 0.05
CSNK1A1-210ENST00000606719 ADRA2BP18089 450 aa14.79□□□□□ -0.04
CSNK1A1-210ENST00000606719 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
CSNK1A1-210ENST00000606719 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
CSNK1A1-210ENST00000606719 KCNA4P22459 653 aa14.32□□□□□ -0.12
CSNK1A1-210ENST00000606719 MSH5O43196 834 aa14.22□□□□□ -0.13
CSNK1A1-210ENST00000606719 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
CSNK1A1-210ENST00000606719 NISCHQ9Y2I1 1504 aa13.98□□□□□ -0.17
CSNK1A1-210ENST00000606719 PPP4R3CPQ6ZMV5 832 aa13.94□□□□□ -0.18
CSNK1A1-210ENST00000606719 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
CSNK1A1-210ENST00000606719 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
CSNK1A1-210ENST00000606719 NPM3O75607 178 aaKnown RBP13.57□□□□□ -0.24
CSNK1A1-210ENST00000606719 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
CSNK1A1-210ENST00000606719 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
CSNK1A1-210ENST00000606719 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
CSNK1A1-210ENST00000606719 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
CSNK1A1-210ENST00000606719 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
CSNK1A1-210ENST00000606719 ZBTB22O15209 634 aa13.22□□□□□ -0.29
CSNK1A1-210ENST00000606719 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.3
CSNK1A1-210ENST00000606719 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
CSNK1A1-210ENST00000606719 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
CSNK1A1-210ENST00000606719 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
CSNK1A1-210ENST00000606719 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
CSNK1A1-210ENST00000606719 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
CSNK1A1-210ENST00000606719 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
CSNK1A1-210ENST00000606719 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
CSNK1A1-210ENST00000606719 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
CSNK1A1-210ENST00000606719 FKBP8Q14318 412 aa12.25□□□□□ -0.45
CSNK1A1-210ENST00000606719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.453e-7■■□□□ 14.4
CSNK1A1-210ENST00000606719 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
CSNK1A1-210ENST00000606719 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
CSNK1A1-210ENST00000606719 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
CSNK1A1-210ENST00000606719 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
CSNK1A1-210ENST00000606719 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
CSNK1A1-210ENST00000606719 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
CSNK1A1-210ENST00000606719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.05□□□□□ -0.48
CSNK1A1-210ENST00000606719 HNRNPUL2Q1KMD3 747 aaKnown RBP12.05□□□□□ -0.48
CSNK1A1-210ENST00000606719 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
CSNK1A1-210ENST00000606719 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
CSNK1A1-210ENST00000606719 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
CSNK1A1-210ENST00000606719 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
CSNK1A1-210ENST00000606719 ZCCHC6Q5VYS8 1495 aaKnown RBP11.83□□□□□ -0.52
CSNK1A1-210ENST00000606719 SHROOM4Q9ULL8 1493 aa11.8□□□□□ -0.52
CSNK1A1-210ENST00000606719 CCDC180Q9P1Z9 1646 aa11.79□□□□□ -0.52
CSNK1A1-210ENST00000606719 APLP2Q06481 763 aa11.78□□□□□ -0.52
CSNK1A1-210ENST00000606719 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
CSNK1A1-210ENST00000606719 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
CSNK1A1-210ENST00000606719 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
CSNK1A1-210ENST00000606719 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
CSNK1A1-210ENST00000606719 CAPN15O75808 1086 aa11.62□□□□□ -0.55
CSNK1A1-210ENST00000606719 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
CSNK1A1-210ENST00000606719 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
CSNK1A1-210ENST00000606719 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
CSNK1A1-210ENST00000606719 FBLN2P98095 1184 aa11.55□□□□□ -0.56
CSNK1A1-210ENST00000606719 HRCP23327 699 aa11.54□□□□□ -0.56
CSNK1A1-210ENST00000606719 POLA2Q14181 598 aa11.54□□□□□ -0.56
CSNK1A1-210ENST00000606719 DSG3P32926 999 aa11.52□□□□□ -0.57
CSNK1A1-210ENST00000606719 PROM2Q8N271 834 aa11.52□□□□□ -0.57
CSNK1A1-210ENST00000606719 VASPP50552 380 aaPredicted RBP11.46□□□□□ -0.57
CSNK1A1-210ENST00000606719 DCAF8L2P0C7V8 631 aa11.43□□□□□ -0.58
CSNK1A1-210ENST00000606719 ABCB7O75027 752 aa11.41□□□□□ -0.58
CSNK1A1-210ENST00000606719 MYO15BQ96JP2 1530 aa11.39□□□□□ -0.59
CSNK1A1-210ENST00000606719 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
CSNK1A1-210ENST00000606719 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
CSNK1A1-210ENST00000606719 PCGF6Q9BYE7 350 aa11.31□□□□□ -0.6
CSNK1A1-210ENST00000606719 TRIM26Q12899 539 aaPredicted RBP11.24□□□□□ -0.61
CSNK1A1-210ENST00000606719 PLCB2Q00722 1185 aa11.21□□□□□ -0.61
CSNK1A1-210ENST00000606719 ZEB1P37275 1124 aaPredicted RBP11.2□□□□□ -0.62
CSNK1A1-210ENST00000606719 PKD2Q13563 968 aa11.2□□□□□ -0.62
CSNK1A1-210ENST00000606719 ZNF692Q9BU19 519 aaPredicted RBP11.17□□□□□ -0.62
CSNK1A1-210ENST00000606719 LOC105371045A0A1W2PR82 267 aa11.16□□□□□ -0.62
CSNK1A1-210ENST00000606719 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
CSNK1A1-210ENST00000606719 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
CSNK1A1-210ENST00000606719 ABCC9O60706 1549 aa11.13□□□□□ -0.63
CSNK1A1-210ENST00000606719 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
CSNK1A1-210ENST00000606719 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
CSNK1A1-210ENST00000606719 SPOCK2Q92563 424 aa11.09□□□□□ -0.63
CSNK1A1-210ENST00000606719 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
CSNK1A1-210ENST00000606719 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
CSNK1A1-210ENST00000606719 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
CSNK1A1-210ENST00000606719 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
CSNK1A1-210ENST00000606719 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
CSNK1A1-210ENST00000606719 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
CSNK1A1-210ENST00000606719 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
CSNK1A1-210ENST00000606719 PLCD3Q8N3E9 789 aa11.04□□□□□ -0.64
CSNK1A1-210ENST00000606719 PPARGC1BQ86YN6 1023 aaKnown RBP11.03□□□□□ -0.64
CSNK1A1-210ENST00000606719 ECM2O94769 699 aaPredicted RBP11.02□□□□□ -0.65
CSNK1A1-210ENST00000606719 RB1CC1Q8TDY2 1594 aa11.02□□□□□ -0.65
CSNK1A1-210ENST00000606719 MIER1Q8N108 512 aa10.98□□□□□ -0.65
CSNK1A1-210ENST00000606719 NACADO15069 1562 aa10.95□□□□□ -0.66
CSNK1A1-210ENST00000606719 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
CSNK1A1-210ENST00000606719 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
CSNK1A1-210ENST00000606719 RGL2O15211 777 aa10.92□□□□□ -0.66
CSNK1A1-210ENST00000606719 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
CSNK1A1-210ENST00000606719 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms