RNA–Protein interactions for RNA: ENST00000526193.5

RBBP4-217, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 4

Gene RBBP4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-217ENST00000526193 NISCHQ9Y2I1 1504 aa21.28■■□□□ 1
RBBP4-217ENST00000526193 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
RBBP4-217ENST00000526193 ABCC9O60706 1549 aa18.8■□□□□ 0.6
RBBP4-217ENST00000526193 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
RBBP4-217ENST00000526193 NACADO15069 1562 aa18.05■□□□□ 0.48
RBBP4-217ENST00000526193 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
RBBP4-217ENST00000526193 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
RBBP4-217ENST00000526193 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.43
RBBP4-217ENST00000526193 ZCCHC6Q5VYS8 1495 aaKnown RBP17.66■□□□□ 0.42
RBBP4-217ENST00000526193 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
RBBP4-217ENST00000526193 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
RBBP4-217ENST00000526193 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
RBBP4-217ENST00000526193 BICRAQ9NZM4 1560 aa17.5■□□□□ 0.39
RBBP4-217ENST00000526193 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
RBBP4-217ENST00000526193 SCRIBQ14160 1630 aa17.16■□□□□ 0.34
RBBP4-217ENST00000526193 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
RBBP4-217ENST00000526193 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
RBBP4-217ENST00000526193 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
RBBP4-217ENST00000526193 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
RBBP4-217ENST00000526193 ATAD2BQ9ULI0 1458 aa16.58■□□□□ 0.24
RBBP4-217ENST00000526193 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
RBBP4-217ENST00000526193 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
RBBP4-217ENST00000526193 BAZ1AQ9NRL2 1556 aaPredicted RBP16.52■□□□□ 0.24
RBBP4-217ENST00000526193 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
RBBP4-217ENST00000526193 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
RBBP4-217ENST00000526193 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
RBBP4-217ENST00000526193 CUX2O14529 1486 aa16.35■□□□□ 0.21
RBBP4-217ENST00000526193 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
RBBP4-217ENST00000526193 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
RBBP4-217ENST00000526193 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
RBBP4-217ENST00000526193 LAMC3Q9Y6N6 1575 aa16.23■□□□□ 0.19
RBBP4-217ENST00000526193 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
RBBP4-217ENST00000526193 NESP48681 1621 aa16.17■□□□□ 0.18
RBBP4-217ENST00000526193 CADPSQ9ULU8 1353 aa16.16■□□□□ 0.18
RBBP4-217ENST00000526193 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
RBBP4-217ENST00000526193 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
RBBP4-217ENST00000526193 WIZO95785 1651 aa16.03■□□□□ 0.16
RBBP4-217ENST00000526193 CFTRP13569 1480 aa16■□□□□ 0.15
RBBP4-217ENST00000526193 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
RBBP4-217ENST00000526193 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.14
RBBP4-217ENST00000526193 WDR62O43379 1518 aa15.93■□□□□ 0.14
RBBP4-217ENST00000526193 KIF21AQ7Z4S6 1674 aa15.91■□□□□ 0.14
RBBP4-217ENST00000526193 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
RBBP4-217ENST00000526193 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
RBBP4-217ENST00000526193 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
RBBP4-217ENST00000526193 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
RBBP4-217ENST00000526193 ABCC8Q09428 1581 aa15.71■□□□□ 0.11
RBBP4-217ENST00000526193 PRDM2Q13029 1718 aa15.66■□□□□ 0.1
RBBP4-217ENST00000526193 IFT140Q96RY7 1462 aa15.64■□□□□ 0.09
RBBP4-217ENST00000526193 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
RBBP4-217ENST00000526193 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
RBBP4-217ENST00000526193 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
RBBP4-217ENST00000526193 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
RBBP4-217ENST00000526193 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
RBBP4-217ENST00000526193 POLA1P09884 1462 aaPredicted RBP15.45■□□□□ 0.06
RBBP4-217ENST00000526193 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
RBBP4-217ENST00000526193 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
RBBP4-217ENST00000526193 SOGA1O94964 1423 aa15.4■□□□□ 0.06
RBBP4-217ENST00000526193 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
RBBP4-217ENST00000526193 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.054e-7■■■■■ 40.1
RBBP4-217ENST00000526193 FGD5Q6ZNL6 1462 aa15.33■□□□□ 0.04
RBBP4-217ENST00000526193 CUX1P39880 1505 aa15.33■□□□□ 0.04
RBBP4-217ENST00000526193 RAD54L2Q9Y4B4 1467 aa15.31■□□□□ 0.04
RBBP4-217ENST00000526193 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
RBBP4-217ENST00000526193 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
RBBP4-217ENST00000526193 GRIN2BQ13224 1484 aa15.27■□□□□ 0.04
RBBP4-217ENST00000526193 ARHGEF11O15085 1522 aa15.27■□□□□ 0.03
RBBP4-217ENST00000526193 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
RBBP4-217ENST00000526193 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
RBBP4-217ENST00000526193 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
RBBP4-217ENST00000526193 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
RBBP4-217ENST00000526193 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
RBBP4-217ENST00000526193 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
RBBP4-217ENST00000526193 SYNJ2O15056 1496 aa15.21■□□□□ 0.03
RBBP4-217ENST00000526193 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
RBBP4-217ENST00000526193 SNAPC4Q5SXM2 1469 aa15.2■□□□□ 0.02
RBBP4-217ENST00000526193 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
RBBP4-217ENST00000526193 FBLN2P98095 1184 aa15.18■□□□□ 0.02
RBBP4-217ENST00000526193 CHD1O14646 1710 aa15.16■□□□□ 0.02
RBBP4-217ENST00000526193 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
RBBP4-217ENST00000526193 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
RBBP4-217ENST00000526193 TOP2BQ02880 1626 aa15.14■□□□□ 0.01
RBBP4-217ENST00000526193 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
RBBP4-217ENST00000526193 CYB5RLQ6IPT4 315 aa15.13■□□□□ 0.01
RBBP4-217ENST00000526193 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
RBBP4-217ENST00000526193 ARAP1Q96P48 1450 aa15.11■□□□□ 0.01
RBBP4-217ENST00000526193 FHAD1B1AJZ9 1412 aa15.07■□□□□ 0
RBBP4-217ENST00000526193 NUP160Q12769 1436 aa15.07■□□□□ 0
RBBP4-217ENST00000526193 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
RBBP4-217ENST00000526193 GRIN2AQ12879 1464 aa15.05■□□□□ -0
RBBP4-217ENST00000526193 PBRM1Q86U86 1689 aa15.03■□□□□ -0
RBBP4-217ENST00000526193 ADAMTS12P58397 1594 aa15□□□□□ -0.01
RBBP4-217ENST00000526193 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
RBBP4-217ENST00000526193 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
RBBP4-217ENST00000526193 IGF1RP08069 1367 aa14.91□□□□□ -0.02
RBBP4-217ENST00000526193 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
RBBP4-217ENST00000526193 JPH4Q96JJ6 628 aa14.88□□□□□ -0.03
RBBP4-217ENST00000526193 TRHP20396 242 aaPredicted RBP14.86□□□□□ -0.03
RBBP4-217ENST00000526193 KIAA0586Q9BVV6 1533 aa14.84□□□□□ -0.03
RBBP4-217ENST00000526193 PRG4Q92954 1404 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms