RNA–Protein interactions for RNA: ENST00000422465.6

RPS3-202, Transcript of ribosomal protein S3, humanhuman

TSL 2

Gene RPS3, Length 903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-202ENST00000422465 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
RPS3-202ENST00000422465 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
RPS3-202ENST00000422465 PHF23Q9BUL5 403 aaPredicted RBP24.49■■□□□ 1.51
RPS3-202ENST00000422465 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
RPS3-202ENST00000422465 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
RPS3-202ENST00000422465 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
RPS3-202ENST00000422465 FOXD1Q16676 465 aa22.45■■□□□ 1.18
RPS3-202ENST00000422465 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
RPS3-202ENST00000422465 ADRA2BP18089 450 aa21.58■■□□□ 1.05
RPS3-202ENST00000422465 ABCC9O60706 1549 aa21.28■■□□□ 1
RPS3-202ENST00000422465 PIAS4Q8N2W9 510 aaPredicted RBP21.13■□□□□ 0.97
RPS3-202ENST00000422465 CCDC180Q9P1Z9 1646 aa20.91■□□□□ 0.94
RPS3-202ENST00000422465 MSH5O43196 834 aa20.64■□□□□ 0.89
RPS3-202ENST00000422465 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
RPS3-202ENST00000422465 RB1CC1Q8TDY2 1594 aa20.13■□□□□ 0.81
RPS3-202ENST00000422465 NACADO15069 1562 aa19.89■□□□□ 0.77
RPS3-202ENST00000422465 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
RPS3-202ENST00000422465 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
RPS3-202ENST00000422465 SCAF1Q9H7N4 1312 aaKnown RBP19.65■□□□□ 0.74
RPS3-202ENST00000422465 MAPK8IP2Q13387 824 aaPredicted RBP19.6■□□□□ 0.73
RPS3-202ENST00000422465 UNC13AQ9UPW8 1703 aa19.57■□□□□ 0.72
RPS3-202ENST00000422465 DCAF8L2P0C7V8 631 aa19.55■□□□□ 0.72
RPS3-202ENST00000422465 MYO15BQ96JP2 1530 aa19.5■□□□□ 0.71
RPS3-202ENST00000422465 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
RPS3-202ENST00000422465 KCNA4P22459 653 aa19.43■□□□□ 0.7
RPS3-202ENST00000422465 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
RPS3-202ENST00000422465 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
RPS3-202ENST00000422465 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
RPS3-202ENST00000422465 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
RPS3-202ENST00000422465 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
RPS3-202ENST00000422465 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
RPS3-202ENST00000422465 DNAJC5Q9H3Z4 198 aa19.13■□□□□ 0.65
RPS3-202ENST00000422465 EIF4G1Q04637 1599 aaKnown RBP19.08■□□□□ 0.65
RPS3-202ENST00000422465 NPM3O75607 178 aaKnown RBP19.08■□□□□ 0.64
RPS3-202ENST00000422465 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
RPS3-202ENST00000422465 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
RPS3-202ENST00000422465 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
RPS3-202ENST00000422465 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
RPS3-202ENST00000422465 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
RPS3-202ENST00000422465 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
RPS3-202ENST00000422465 CUX2O14529 1486 aa18.65■□□□□ 0.58
RPS3-202ENST00000422465 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
RPS3-202ENST00000422465 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
RPS3-202ENST00000422465 DCAF8L1A6NGE4 600 aa18.43■□□□□ 0.54
RPS3-202ENST00000422465 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
RPS3-202ENST00000422465 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
RPS3-202ENST00000422465 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
RPS3-202ENST00000422465 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
RPS3-202ENST00000422465 NESP48681 1621 aa18.1■□□□□ 0.49
RPS3-202ENST00000422465 SUPT5HO00267 1087 aaKnown RBP18.09■□□□□ 0.49
RPS3-202ENST00000422465 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.49
RPS3-202ENST00000422465 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
RPS3-202ENST00000422465 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
RPS3-202ENST00000422465 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
RPS3-202ENST00000422465 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
RPS3-202ENST00000422465 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
RPS3-202ENST00000422465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.472e-21■□□□□ 8.6
RPS3-202ENST00000422465 PDS5BQ9NTI5 1447 aa17.95■□□□□ 0.46
RPS3-202ENST00000422465 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
RPS3-202ENST00000422465 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
RPS3-202ENST00000422465 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
RPS3-202ENST00000422465 ZBTB22O15209 634 aa17.91■□□□□ 0.46
RPS3-202ENST00000422465 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
RPS3-202ENST00000422465 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
RPS3-202ENST00000422465 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
RPS3-202ENST00000422465 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
RPS3-202ENST00000422465 WDR62O43379 1518 aa17.76■□□□□ 0.43
RPS3-202ENST00000422465 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
RPS3-202ENST00000422465 RNF39Q9H2S5 420 aa17.73■□□□□ 0.43
RPS3-202ENST00000422465 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
RPS3-202ENST00000422465 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
RPS3-202ENST00000422465 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
RPS3-202ENST00000422465 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
RPS3-202ENST00000422465 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
RPS3-202ENST00000422465 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
RPS3-202ENST00000422465 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
RPS3-202ENST00000422465 C1QBPQ07021 282 aaKnown RBP17.48■□□□□ 0.39
RPS3-202ENST00000422465 RIMBP3CA6NJZ7 1639 aa17.46■□□□□ 0.39
RPS3-202ENST00000422465 RIMBP3BA6NNM3 1639 aa17.46■□□□□ 0.39
RPS3-202ENST00000422465 RIMBP3Q9UFD9 1639 aa17.46■□□□□ 0.39
RPS3-202ENST00000422465 CFTRP13569 1480 aa17.44■□□□□ 0.38
RPS3-202ENST00000422465 WIZO95785 1651 aa17.41■□□□□ 0.38
RPS3-202ENST00000422465 URB2Q14146 1524 aaKnown RBP17.39■□□□□ 0.37
RPS3-202ENST00000422465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
RPS3-202ENST00000422465 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
RPS3-202ENST00000422465 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
RPS3-202ENST00000422465 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
RPS3-202ENST00000422465 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
RPS3-202ENST00000422465 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
RPS3-202ENST00000422465 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
RPS3-202ENST00000422465 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
RPS3-202ENST00000422465 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
RPS3-202ENST00000422465 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
RPS3-202ENST00000422465 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
RPS3-202ENST00000422465 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
RPS3-202ENST00000422465 ATXN8OSP0DMR3 200 aa17.2■□□□□ 0.34
RPS3-202ENST00000422465 APLP2Q06481 763 aa17.2■□□□□ 0.34
RPS3-202ENST00000422465 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
RPS3-202ENST00000422465 ABCC8Q09428 1581 aa17.17■□□□□ 0.34
RPS3-202ENST00000422465 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms