RNA–Protein interactions for RNA: ENST00000526248.5

RPS3-206, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-206ENST00000526248 NISCHQ9Y2I1 1504 aa39.47■■■■□ 3.91
RPS3-206ENST00000526248 CCDC180Q9P1Z9 1646 aa35.24■■■■□ 3.23
RPS3-206ENST00000526248 ABCC9O60706 1549 aa34.85■■■■□ 3.17
RPS3-206ENST00000526248 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
RPS3-206ENST00000526248 NACADO15069 1562 aa33.16■■■□□ 2.9
RPS3-206ENST00000526248 DCAF8L2P0C7V8 631 aa33.02■■■□□ 2.88
RPS3-206ENST00000526248 ZCCHC6Q5VYS8 1495 aaKnown RBP32.83■■■□□ 2.85
RPS3-206ENST00000526248 MYO15BQ96JP2 1530 aa32.82■■■□□ 2.85
RPS3-206ENST00000526248 UNC13AQ9UPW8 1703 aa32.71■■■□□ 2.83
RPS3-206ENST00000526248 DCAF1Q9Y4B6 1507 aa32.59■■■□□ 2.81
RPS3-206ENST00000526248 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
RPS3-206ENST00000526248 BICRAQ9NZM4 1560 aa32.44■■■□□ 2.78
RPS3-206ENST00000526248 DNAJC5BQ9UF47 199 aa32.35■■■□□ 2.77
RPS3-206ENST00000526248 SCRIBQ14160 1630 aa32.2■■■□□ 2.75
RPS3-206ENST00000526248 SHROOM4Q9ULL8 1493 aa31.87■■■□□ 2.69
RPS3-206ENST00000526248 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
RPS3-206ENST00000526248 CC2D2AQ9P2K1 1620 aa31.52■■■□□ 2.64
RPS3-206ENST00000526248 CECR2Q9BXF3 1484 aa31.31■■■□□ 2.6
RPS3-206ENST00000526248 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
RPS3-206ENST00000526248 ATAD2BQ9ULI0 1458 aa30.62■■■□□ 2.49
RPS3-206ENST00000526248 NCAPD3P42695 1498 aa30.61■■■□□ 2.49
RPS3-206ENST00000526248 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
RPS3-206ENST00000526248 SMARCA2P51531 1590 aa30.51■■■□□ 2.47
RPS3-206ENST00000526248 MROH2BQ7Z745 1585 aa30.47■■■□□ 2.47
RPS3-206ENST00000526248 HMGXB3Q12766 1538 aa30.46■■■□□ 2.47
RPS3-206ENST00000526248 PEG3Q9GZU2 1588 aa30.41■■■□□ 2.46
RPS3-206ENST00000526248 BAZ1BQ9UIG0 1483 aaKnown RBP30.32■■■□□ 2.44
RPS3-206ENST00000526248 WIZO95785 1651 aa30.15■■■□□ 2.42
RPS3-206ENST00000526248 NESP48681 1621 aa30.11■■■□□ 2.41
RPS3-206ENST00000526248 ERCC6Q03468 1493 aa29.98■■■□□ 2.39
RPS3-206ENST00000526248 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.38
RPS3-206ENST00000526248 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
RPS3-206ENST00000526248 CUX2O14529 1486 aa29.78■■■□□ 2.36
RPS3-206ENST00000526248 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.35
RPS3-206ENST00000526248 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
RPS3-206ENST00000526248 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
RPS3-206ENST00000526248 CADPSQ9ULU8 1353 aa29.68■■■□□ 2.34
RPS3-206ENST00000526248 PDS5BQ9NTI5 1447 aa29.61■■■□□ 2.33
RPS3-206ENST00000526248 CFTRP13569 1480 aa29.48■■■□□ 2.31
RPS3-206ENST00000526248 MRC2Q9UBG0 1479 aa29.41■■■□□ 2.3
RPS3-206ENST00000526248 CCDC88BA6NC98 1476 aa29.4■■■□□ 2.3
RPS3-206ENST00000526248 FANCD2Q9BXW9 1451 aa29.39■■■□□ 2.3
RPS3-206ENST00000526248 CEP164Q9UPV0 1460 aa29.36■■■□□ 2.29
RPS3-206ENST00000526248 WDR62O43379 1518 aa29.36■■■□□ 2.29
RPS3-206ENST00000526248 PRDM2Q13029 1718 aa29.28■■■□□ 2.28
RPS3-206ENST00000526248 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
RPS3-206ENST00000526248 URB2Q14146 1524 aaKnown RBP29.19■■■□□ 2.26
RPS3-206ENST00000526248 TOPBP1Q92547 1522 aa28.9■■■□□ 2.22
RPS3-206ENST00000526248 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
RPS3-206ENST00000526248 DNMBPQ6XZF7 1577 aa28.83■■■□□ 2.21
RPS3-206ENST00000526248 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
RPS3-206ENST00000526248 IFT140Q96RY7 1462 aa28.74■■■□□ 2.19
RPS3-206ENST00000526248 ABCC8Q09428 1581 aa28.74■■■□□ 2.19
RPS3-206ENST00000526248 TARBP1Q13395 1621 aaKnown RBP28.66■■■□□ 2.18
RPS3-206ENST00000526248 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
RPS3-206ENST00000526248 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
RPS3-206ENST00000526248 CUX1P39880 1505 aa28.61■■■□□ 2.17
RPS3-206ENST00000526248 RAD54L2Q9Y4B4 1467 aa28.55■■■□□ 2.16
RPS3-206ENST00000526248 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
RPS3-206ENST00000526248 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.151e-7■■■■■ 28
RPS3-206ENST00000526248 SOGA1O94964 1423 aa28.45■■■□□ 2.15
RPS3-206ENST00000526248 OSCARQ8IYS5 282 aa28.42■■■□□ 2.14
RPS3-206ENST00000526248 TDRD9Q8NDG6 1382 aaKnown RBP28.38■■■□□ 2.13
RPS3-206ENST00000526248 WDR97A6NE52 1622 aa28.38■■■□□ 2.13
RPS3-206ENST00000526248 CHD1O14646 1710 aa28.35■■■□□ 2.13
RPS3-206ENST00000526248 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
RPS3-206ENST00000526248 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
RPS3-206ENST00000526248 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
RPS3-206ENST00000526248 TOP2BQ02880 1626 aa28.22■■■□□ 2.11
RPS3-206ENST00000526248 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.118e-7■□□□□ 9.9
RPS3-206ENST00000526248 PBRM1Q86U86 1689 aa28.19■■■□□ 2.1
RPS3-206ENST00000526248 ABCA10Q8WWZ4 1543 aa28.19■■■□□ 2.1
RPS3-206ENST00000526248 ABCA5Q8WWZ7 1642 aa28.18■■■□□ 2.1
RPS3-206ENST00000526248 TRIM41Q8WV44 630 aa28.18■■■□□ 2.1
RPS3-206ENST00000526248 RIMBP3CA6NJZ7 1639 aa28.18■■■□□ 2.1
RPS3-206ENST00000526248 RIMBP3BA6NNM3 1639 aa28.18■■■□□ 2.1
RPS3-206ENST00000526248 RIMBP3Q9UFD9 1639 aa28.18■■■□□ 2.1
RPS3-206ENST00000526248 GRIN2BQ13224 1484 aa28.16■■■□□ 2.1
RPS3-206ENST00000526248 GAPVD1Q14C86 1478 aa28.14■■■□□ 2.09
RPS3-206ENST00000526248 FBLN2P98095 1184 aa28.13■■■□□ 2.09
RPS3-206ENST00000526248 MAGI1Q96QZ7 1491 aaPredicted RBP28.12■■■□□ 2.09
RPS3-206ENST00000526248 ARHGEF11O15085 1522 aa28.1■■■□□ 2.09
RPS3-206ENST00000526248 SYNJ2O15056 1496 aa28.03■■■□□ 2.08
RPS3-206ENST00000526248 CLASP1Q7Z460 1538 aa28.01■■■□□ 2.07
RPS3-206ENST00000526248 CHMP7Q8WUX9 453 aaPredicted RBP27.97■■■□□ 2.07
RPS3-206ENST00000526248 ADAMTS12P58397 1594 aa27.94■■■□□ 2.06
RPS3-206ENST00000526248 ARAP1Q96P48 1450 aa27.89■■■□□ 2.05
RPS3-206ENST00000526248 GRIN2AQ12879 1464 aa27.84■■■□□ 2.05
RPS3-206ENST00000526248 ERICH3Q5RHP9 1530 aa27.83■■■□□ 2.05
RPS3-206ENST00000526248 CEP170Q5SW79 1584 aa27.79■■■□□ 2.04
RPS3-206ENST00000526248 CYB5RLQ6IPT4 315 aa27.78■■■□□ 2.04
RPS3-206ENST00000526248 FHAD1B1AJZ9 1412 aa27.77■■■□□ 2.04
RPS3-206ENST00000526248 NUP160Q12769 1436 aa27.74■■■□□ 2.03
RPS3-206ENST00000526248 ERCC6L2Q5T890 1561 aa27.68■■■□□ 2.02
RPS3-206ENST00000526248 SHROOM2Q13796 1616 aa27.61■■■□□ 2.01
RPS3-206ENST00000526248 KIF27Q86VH2 1401 aa27.59■■■□□ 2.01
RPS3-206ENST00000526248 IGF1RP08069 1367 aa27.58■■■□□ 2.01
RPS3-206ENST00000526248 RUSC2Q8N2Y8 1516 aa27.54■■■□□ 2
RPS3-206ENST00000526248 CUL7Q14999 1698 aa27.52■■■□□ 2
RPS3-206ENST00000526248 PRG4Q92954 1404 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms