RNA–Protein interactions for RNA: ENST00000504612.5

ATP2C1-207, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2C1, Length 3,148 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-207ENST00000504612 CHIC1Q5VXU3 224 aa11.42□□□□□ -0.58
ATP2C1-207ENST00000504612 AEBP2Q6ZN18 517 aaPredicted RBP11.41□□□□□ -0.58
ATP2C1-207ENST00000504612 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
ATP2C1-207ENST00000504612 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
ATP2C1-207ENST00000504612 NISCHQ9Y2I1 1504 aa10.52□□□□□ -0.72
ATP2C1-207ENST00000504612 PHF23Q9BUL5 403 aaPredicted RBP10.44□□□□□ -0.74
ATP2C1-207ENST00000504612 PLPPR3Q6T4P5 718 aa10.33□□□□□ -0.76
ATP2C1-207ENST00000504612 RTN4Q9NQC3 1192 aaKnown RBP10.08□□□□□ -0.8
ATP2C1-207ENST00000504612 SENP3Q9H4L4 574 aaPredicted RBP10□□□□□ -0.81
ATP2C1-207ENST00000504612 KCNA4P22459 653 aa9.95□□□□□ -0.82
ATP2C1-207ENST00000504612 CSRNP3Q8WYN3 585 aa9.93□□□□□ -0.82
ATP2C1-207ENST00000504612 CCDC180Q9P1Z9 1646 aa9.73□□□□□ -0.85
ATP2C1-207ENST00000504612 PRKCSHP14314 528 aaPredicted RBP9.63□□□□□ -0.87
ATP2C1-207ENST00000504612 AMER1Q5JTC6 1135 aaPredicted RBP9.59□□□□□ -0.87
ATP2C1-207ENST00000504612 NCBP3Q53F19 620 aaKnown RBP9.52□□□□□ -0.89
ATP2C1-207ENST00000504612 ADRA2BP18089 450 aa9.49□□□□□ -0.89
ATP2C1-207ENST00000504612 SLC4A1APQ9BWU0 796 aaKnown RBP9.44□□□□□ -0.9
ATP2C1-207ENST00000504612 ABCC9O60706 1549 aa9.43□□□□□ -0.9
ATP2C1-207ENST00000504612 DAXXQ9UER7 740 aaPredicted RBP9.38□□□□□ -0.91
ATP2C1-207ENST00000504612 ZBTB22O15209 634 aa9.29□□□□□ -0.92
ATP2C1-207ENST00000504612 TIMELESSQ9UNS1 1208 aa9.24□□□□□ -0.93
ATP2C1-207ENST00000504612 RB1CC1Q8TDY2 1594 aa9.15□□□□□ -0.94
ATP2C1-207ENST00000504612 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
ATP2C1-207ENST00000504612 FOXD1Q16676 465 aa9.13□□□□□ -0.95
ATP2C1-207ENST00000504612 UNC13AQ9UPW8 1703 aa9.1□□□□□ -0.95
ATP2C1-207ENST00000504612 NACADO15069 1562 aa9.1□□□□□ -0.95
ATP2C1-207ENST00000504612 TULP1O00294 542 aaPredicted RBP9.09□□□□□ -0.95
ATP2C1-207ENST00000504612 MYO15BQ96JP2 1530 aa9.06□□□□□ -0.96
ATP2C1-207ENST00000504612 TPRNQ4KMQ1 711 aa9.06□□□□□ -0.96
ATP2C1-207ENST00000504612 PPP6R1Q9UPN7 881 aa8.99□□□□□ -0.97
ATP2C1-207ENST00000504612 PLCB2Q00722 1185 aa8.96□□□□□ -0.98
ATP2C1-207ENST00000504612 DNAJC5BQ9UF47 199 aa8.95□□□□□ -0.98
ATP2C1-207ENST00000504612 NPM3O75607 178 aaKnown RBP8.95□□□□□ -0.98
ATP2C1-207ENST00000504612 BICRAQ9NZM4 1560 aa8.94□□□□□ -0.98
ATP2C1-207ENST00000504612 SHROOM4Q9ULL8 1493 aa8.94□□□□□ -0.98
ATP2C1-207ENST00000504612 HAP1P54257 671 aaPredicted RBP8.93□□□□□ -0.98
ATP2C1-207ENST00000504612 BCANQ96GW7 911 aa8.93□□□□□ -0.98
ATP2C1-207ENST00000504612 ARXQ96QS3 562 aa8.92□□□□□ -0.98
ATP2C1-207ENST00000504612 FKBP8Q14318 412 aa8.89□□□□□ -0.99
ATP2C1-207ENST00000504612 DCAF1Q9Y4B6 1507 aa8.86□□□□□ -0.99
ATP2C1-207ENST00000504612 MSH5O43196 834 aa8.81□□□□□ -1
ATP2C1-207ENST00000504612 PPP4R3CPQ6ZMV5 832 aa8.76□□□□□ -1.01
ATP2C1-207ENST00000504612 ZCCHC6Q5VYS8 1495 aaKnown RBP8.73□□□□□ -1.01
ATP2C1-207ENST00000504612 KLHL34Q8N239 644 aa8.73□□□□□ -1.01
ATP2C1-207ENST00000504612 GTF3C3Q9Y5Q9 886 aa8.73□□□□□ -1.01
ATP2C1-207ENST00000504612 KDM2AQ9Y2K7 1162 aa8.72□□□□□ -1.01
ATP2C1-207ENST00000504612 FBLN2P98095 1184 aa8.71□□□□□ -1.01
ATP2C1-207ENST00000504612 HOMEZQ8IX15 550 aa8.71□□□□□ -1.01
ATP2C1-207ENST00000504612 CC2D2AQ9P2K1 1620 aa8.7□□□□□ -1.02
ATP2C1-207ENST00000504612 PODXL2Q9NZ53 605 aa8.69□□□□□ -1.02
ATP2C1-207ENST00000504612 PPARGC1BQ86YN6 1023 aaKnown RBP8.68□□□□□ -1.02
ATP2C1-207ENST00000504612 EIF4G1Q04637 1599 aaKnown RBP8.66□□□□□ -1.02
ATP2C1-207ENST00000504612 HRCP23327 699 aa8.65□□□□□ -1.03
ATP2C1-207ENST00000504612 SUPT5HO00267 1087 aaKnown RBP8.64□□□□□ -1.03
ATP2C1-207ENST00000504612 PABPN1Q86U42 306 aaKnown RBP eCLIP8.6□□□□□ -1.03
ATP2C1-207ENST00000504612 DCAF8L2P0C7V8 631 aa8.6□□□□□ -1.03
ATP2C1-207ENST00000504612 PCGF6Q9BYE7 350 aa8.59□□□□□ -1.03
ATP2C1-207ENST00000504612 CECR2Q9BXF3 1484 aa8.58□□□□□ -1.04
ATP2C1-207ENST00000504612 RANGAP1P46060 587 aaPredicted RBP8.57□□□□□ -1.04
ATP2C1-207ENST00000504612 FOXD4L1Q9NU39 408 aa8.56□□□□□ -1.04
ATP2C1-207ENST00000504612 APLP2Q06481 763 aa8.56□□□□□ -1.04
ATP2C1-207ENST00000504612 SCRIBQ14160 1630 aa8.55□□□□□ -1.04
ATP2C1-207ENST00000504612 TMEM132AQ24JP5 1023 aa8.55□□□□□ -1.04
ATP2C1-207ENST00000504612 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
ATP2C1-207ENST00000504612 PIAS4Q8N2W9 510 aaPredicted RBP8.49□□□□□ -1.05
ATP2C1-207ENST00000504612 C14orf37Q86TY3 774 aa8.49□□□□□ -1.05
ATP2C1-207ENST00000504612 TRIM26Q12899 539 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-207ENST00000504612 CUX2O14529 1486 aa8.41□□□□□ -1.06
ATP2C1-207ENST00000504612 POTEDQ86YR6 584 aa8.41□□□□□ -1.06
ATP2C1-207ENST00000504612 UBTFP17480 764 aaKnown RBP8.4□□□□□ -1.06
ATP2C1-207ENST00000504612 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-207ENST00000504612 DNAJC5Q9H3Z4 198 aa8.38□□□□□ -1.07
ATP2C1-207ENST00000504612 HMGXB3Q12766 1538 aa8.35□□□□□ -1.07
ATP2C1-207ENST00000504612 NCAPD3P42695 1498 aa8.35□□□□□ -1.07
ATP2C1-207ENST00000504612 CFAP44Q96MT7 982 aa8.34□□□□□ -1.08
ATP2C1-207ENST00000504612 PEG3Q9GZU2 1588 aa8.33□□□□□ -1.08
ATP2C1-207ENST00000504612 LOC105371045A0A1W2PR82 267 aa8.33□□□□□ -1.08
ATP2C1-207ENST00000504612 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
ATP2C1-207ENST00000504612 TSHZ2Q9NRE2 1034 aa8.33□□□□□ -1.08
ATP2C1-207ENST00000504612 NPM1P06748 294 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATP2C1-207ENST00000504612 THOC2Q8NI27 1593 aaKnown RBP8.29□□□□□ -1.08
ATP2C1-207ENST00000504612 SCAF1Q9H7N4 1312 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-207ENST00000504612 SMARCA4P51532 1647 aa8.28□□□□□ -1.08
ATP2C1-207ENST00000504612 SMARCA2P51531 1590 aa8.27□□□□□ -1.08
ATP2C1-207ENST00000504612 PKD2Q13563 968 aa8.26□□□□□ -1.09
ATP2C1-207ENST00000504612 ERICH6Q7L0X2 663 aa8.25□□□□□ -1.09
ATP2C1-207ENST00000504612 ATAD2BQ9ULI0 1458 aa8.25□□□□□ -1.09
ATP2C1-207ENST00000504612 TRHP20396 242 aaPredicted RBP8.23□□□□□ -1.09
ATP2C1-207ENST00000504612 LAMC3Q9Y6N6 1575 aa8.23□□□□□ -1.09
ATP2C1-207ENST00000504612 PELP1Q8IZL8 1130 aaKnown RBP8.23□□□□□ -1.09
ATP2C1-207ENST00000504612 KIF21AQ7Z4S6 1674 aa8.19□□□□□ -1.1
ATP2C1-207ENST00000504612 BAZ1AQ9NRL2 1556 aaPredicted RBP8.18□□□□□ -1.1
ATP2C1-207ENST00000504612 NBR1Q14596 966 aa8.17□□□□□ -1.1
ATP2C1-207ENST00000504612 IFNLR1Q8IU57 520 aaPredicted RBP8.14□□□□□ -1.11
ATP2C1-207ENST00000504612 ERCC6Q03468 1493 aa8.13□□□□□ -1.11
ATP2C1-207ENST00000504612 EIF5BO60841 1220 aaKnown RBP8.12□□□□□ -1.11
ATP2C1-207ENST00000504612 SLC4A2P04920 1241 aa8.12□□□□□ -1.11
ATP2C1-207ENST00000504612 PRDM2Q13029 1718 aa8.12□□□□□ -1.11
ATP2C1-207ENST00000504612 WDR62O43379 1518 aa8.11□□□□□ -1.11
ATP2C1-207ENST00000504612 CNKSR2Q8WXI2 1034 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms