RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
PTPA-207ENST00000393370 HRCP23327 699 aa29.21■■■□□ 2.27
PTPA-207ENST00000393370 PELP1Q8IZL8 1130 aaKnown RBP28.67■■■□□ 2.18
PTPA-207ENST00000393370 PPARGC1BQ86YN6 1023 aaKnown RBP28.63■■■□□ 2.17
PTPA-207ENST00000393370 PCGF6Q9BYE7 350 aa28.43■■■□□ 2.14
PTPA-207ENST00000393370 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
PTPA-207ENST00000393370 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
PTPA-207ENST00000393370 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
PTPA-207ENST00000393370 SCAF1Q9H7N4 1312 aaKnown RBP27.88■■■□□ 2.05
PTPA-207ENST00000393370 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
PTPA-207ENST00000393370 MYT1Q01538 1121 aa27.64■■■□□ 2.01
PTPA-207ENST00000393370 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
PTPA-207ENST00000393370 TRIM26Q12899 539 aaPredicted RBP27.37■■□□□ 1.97
PTPA-207ENST00000393370 CCDC180Q9P1Z9 1646 aa27.26■■□□□ 1.95
PTPA-207ENST00000393370 ZEB1P37275 1124 aaPredicted RBP27.23■■□□□ 1.95
PTPA-207ENST00000393370 LOC105371045A0A1W2PR82 267 aa27.22■■□□□ 1.95
PTPA-207ENST00000393370 ACIN1Q9UKV3 1341 aaKnown RBP27.04■■□□□ 1.92
PTPA-207ENST00000393370 NEUROD1Q13562 356 aa26.97■■□□□ 1.91
PTPA-207ENST00000393370 GTF3C3Q9Y5Q9 886 aa26.85■■□□□ 1.89
PTPA-207ENST00000393370 ZCCHC6Q5VYS8 1495 aaKnown RBP26.61■■□□□ 1.85
PTPA-207ENST00000393370 CENPBP07199 599 aaPredicted RBP26.58■■□□□ 1.84
PTPA-207ENST00000393370 DIEXFQ68CQ4 756 aaKnown RBP26.36■■□□□ 1.81
PTPA-207ENST00000393370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
PTPA-207ENST00000393370 CCER1Q8TC90 406 aaPredicted RBP26.13■■□□□ 1.77
PTPA-207ENST00000393370 TTBK1Q5TCY1 1321 aaPredicted RBP26.02■■□□□ 1.76
PTPA-207ENST00000393370 YTHDC1Q96MU7 727 aaKnown RBP26■■□□□ 1.75
PTPA-207ENST00000393370 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
PTPA-207ENST00000393370 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
PTPA-207ENST00000393370 TRIM41Q8WV44 630 aa25.94■■□□□ 1.74
PTPA-207ENST00000393370 BCL11AQ9H165 835 aa25.93■■□□□ 1.74
PTPA-207ENST00000393370 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
PTPA-207ENST00000393370 ABCC9O60706 1549 aa25.88■■□□□ 1.73
PTPA-207ENST00000393370 ZNF316A6NFI3 1004 aaPredicted RBP25.74■■□□□ 1.71
PTPA-207ENST00000393370 ANP32EQ9BTT0 268 aa25.69■■□□□ 1.7
PTPA-207ENST00000393370 MIER1Q8N108 512 aa25.67■■□□□ 1.7
PTPA-207ENST00000393370 TSHZ2Q9NRE2 1034 aa25.47■■□□□ 1.67
PTPA-207ENST00000393370 SUPT16HQ9Y5B9 1047 aaKnown RBP25.47■■□□□ 1.67
PTPA-207ENST00000393370 CSRNP3Q8WYN3 585 aa25.46■■□□□ 1.67
PTPA-207ENST00000393370 RSF1Q96T23 1441 aaPredicted RBP25.31■■□□□ 1.64
PTPA-207ENST00000393370 CLSPNQ9HAW4 1339 aa25.3■■□□□ 1.64
PTPA-207ENST00000393370 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
PTPA-207ENST00000393370 PRKCSHP14314 528 aaPredicted RBP25.14■■□□□ 1.61
PTPA-207ENST00000393370 WRNQ14191 1432 aaPredicted RBP eCLIP25.1■■□□□ 1.611e-6■■□□□ 12
PTPA-207ENST00000393370 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
PTPA-207ENST00000393370 BCANQ96GW7 911 aa24.87■■□□□ 1.57
PTPA-207ENST00000393370 HNRNPUL2Q1KMD3 747 aaKnown RBP24.86■■□□□ 1.57
PTPA-207ENST00000393370 NACADO15069 1562 aa24.85■■□□□ 1.57
PTPA-207ENST00000393370 RBM19Q9Y4C8 960 aaKnown RBP24.82■■□□□ 1.56
PTPA-207ENST00000393370 SCRIBQ14160 1630 aa24.69■■□□□ 1.54
PTPA-207ENST00000393370 FKBP8Q14318 412 aa24.69■■□□□ 1.54
PTPA-207ENST00000393370 MSH5O43196 834 aa24.68■■□□□ 1.54
PTPA-207ENST00000393370 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
PTPA-207ENST00000393370 KCNH8Q96L42 1107 aa24.63■■□□□ 1.53
PTPA-207ENST00000393370 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
PTPA-207ENST00000393370 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
PTPA-207ENST00000393370 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
PTPA-207ENST00000393370 ITGAEP38570 1179 aa24.51■■□□□ 1.51
PTPA-207ENST00000393370 EIF4G1Q04637 1599 aaKnown RBP24.49■■□□□ 1.51
PTPA-207ENST00000393370 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
PTPA-207ENST00000393370 ERICH6Q7L0X2 663 aa24.49■■□□□ 1.51
PTPA-207ENST00000393370 SOGA1O94964 1423 aa24.47■■□□□ 1.51
PTPA-207ENST00000393370 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
PTPA-207ENST00000393370 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.5
PTPA-207ENST00000393370 NEFLP07196 543 aa24.4■■□□□ 1.5
PTPA-207ENST00000393370 DHX57Q6P158 1386 aaKnown RBP24.4■■□□□ 1.5
PTPA-207ENST00000393370 WIZO95785 1651 aa24.39■■□□□ 1.49
PTPA-207ENST00000393370 FANCIQ9NVI1 1328 aa24.36■■□□□ 1.49
PTPA-207ENST00000393370 ANO8Q9HCE9 1232 aaPredicted RBP24.32■■□□□ 1.48
PTPA-207ENST00000393370 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
PTPA-207ENST00000393370 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
PTPA-207ENST00000393370 DEKP35659 375 aaKnown RBP24.31■■□□□ 1.48
PTPA-207ENST00000393370 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
PTPA-207ENST00000393370 MYT1LQ9UL68 1186 aa24.24■■□□□ 1.47
PTPA-207ENST00000393370 EEA1Q15075 1411 aa24.23■■□□□ 1.47
PTPA-207ENST00000393370 APLP2Q06481 763 aa24.21■■□□□ 1.47
PTPA-207ENST00000393370 TRIM52Q96A61 297 aa24.19■■□□□ 1.46
PTPA-207ENST00000393370 CLIP1P30622 1438 aa24.18■■□□□ 1.46
PTPA-207ENST00000393370 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
PTPA-207ENST00000393370 VPS8Q8N3P4 1428 aa24.15■■□□□ 1.46
PTPA-207ENST00000393370 CDK11AQ9UQ88 783 aaPredicted RBP24.12■■□□□ 1.45
PTPA-207ENST00000393370 DDX10Q13206 875 aaKnown RBP24.12■■□□□ 1.45
PTPA-207ENST00000393370 BICRAQ9NZM4 1560 aa24.11■■□□□ 1.45
PTPA-207ENST00000393370 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
PTPA-207ENST00000393370 IRX6P78412 446 aaPredicted RBP23.98■■□□□ 1.43
PTPA-207ENST00000393370 CEP164Q9UPV0 1460 aa23.97■■□□□ 1.43
PTPA-207ENST00000393370 PPP1R15AO75807 674 aaPredicted RBP23.95■■□□□ 1.42
PTPA-207ENST00000393370 NBR1Q14596 966 aa23.95■■□□□ 1.42
PTPA-207ENST00000393370 CCER2I3L3R5 266 aa23.94■■□□□ 1.42
PTPA-207ENST00000393370 RANGAP1P46060 587 aaPredicted RBP23.93■■□□□ 1.42
PTPA-207ENST00000393370 ERICH6BQ5W0A0 696 aa23.92■■□□□ 1.42
PTPA-207ENST00000393370 CCDC136Q96JN2 1154 aa23.91■■□□□ 1.42
PTPA-207ENST00000393370 KIF21BO75037 1637 aa23.88■■□□□ 1.41
PTPA-207ENST00000393370 ANP32CO43423 234 aa23.85■■□□□ 1.41
PTPA-207ENST00000393370 NOP58Q9Y2X3 529 aaKnown RBP23.85■■□□□ 1.41
PTPA-207ENST00000393370 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
PTPA-207ENST00000393370 SMARCA2P51531 1590 aa23.83■■□□□ 1.41
PTPA-207ENST00000393370 PAK3O75914 559 aaPredicted RBP23.83■■□□□ 1.41
PTPA-207ENST00000393370 CUX2O14529 1486 aa23.82■■□□□ 1.4
PTPA-207ENST00000393370 KANK4Q5T7N3 995 aaPredicted RBP23.82■■□□□ 1.4
PTPA-207ENST00000393370 HIRIP3Q9BW71 556 aaPredicted RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms