RNA–Protein interactions for RNA: ENST00000401893.7

RBBP4-203, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-203ENST00000401893 NISCHQ9Y2I1 1504 aa30.96■■■□□ 2.55
RBBP4-203ENST00000401893 CCDC180Q9P1Z9 1646 aa27.7■■■□□ 2.03
RBBP4-203ENST00000401893 ABCC9O60706 1549 aa27.34■■□□□ 1.97
RBBP4-203ENST00000401893 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
RBBP4-203ENST00000401893 NACADO15069 1562 aa26.11■■□□□ 1.77
RBBP4-203ENST00000401893 DCAF8L2P0C7V8 631 aa26.02■■□□□ 1.76
RBBP4-203ENST00000401893 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.73
RBBP4-203ENST00000401893 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
RBBP4-203ENST00000401893 DCAF1Q9Y4B6 1507 aa25.61■■□□□ 1.69
RBBP4-203ENST00000401893 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
RBBP4-203ENST00000401893 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
RBBP4-203ENST00000401893 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
RBBP4-203ENST00000401893 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
RBBP4-203ENST00000401893 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
RBBP4-203ENST00000401893 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
RBBP4-203ENST00000401893 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
RBBP4-203ENST00000401893 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
RBBP4-203ENST00000401893 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
RBBP4-203ENST00000401893 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
RBBP4-203ENST00000401893 BAZ1AQ9NRL2 1556 aaPredicted RBP24.06■■□□□ 1.44
RBBP4-203ENST00000401893 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
RBBP4-203ENST00000401893 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
RBBP4-203ENST00000401893 ATAD2BQ9ULI0 1458 aa24.01■■□□□ 1.43
RBBP4-203ENST00000401893 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
RBBP4-203ENST00000401893 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
RBBP4-203ENST00000401893 BAZ1BQ9UIG0 1483 aaKnown RBP23.85■■□□□ 1.41
RBBP4-203ENST00000401893 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.41
RBBP4-203ENST00000401893 ERCC6Q03468 1493 aa23.65■■□□□ 1.38
RBBP4-203ENST00000401893 WIZO95785 1651 aa23.58■■□□□ 1.37
RBBP4-203ENST00000401893 NESP48681 1621 aa23.55■■□□□ 1.36
RBBP4-203ENST00000401893 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
RBBP4-203ENST00000401893 CUX2O14529 1486 aa23.48■■□□□ 1.35
RBBP4-203ENST00000401893 RSF1Q96T23 1441 aaPredicted RBP23.45■■□□□ 1.34
RBBP4-203ENST00000401893 PDS5BQ9NTI5 1447 aa23.36■■□□□ 1.33
RBBP4-203ENST00000401893 CADPSQ9ULU8 1353 aa23.34■■□□□ 1.33
RBBP4-203ENST00000401893 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
RBBP4-203ENST00000401893 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
RBBP4-203ENST00000401893 THOC2Q8NI27 1593 aaKnown RBP23.28■■□□□ 1.32
RBBP4-203ENST00000401893 CFTRP13569 1480 aa23.14■■□□□ 1.29
RBBP4-203ENST00000401893 MRC2Q9UBG0 1479 aa23.13■■□□□ 1.29
RBBP4-203ENST00000401893 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
RBBP4-203ENST00000401893 FANCD2Q9BXW9 1451 aa23.1■■□□□ 1.29
RBBP4-203ENST00000401893 WDR62O43379 1518 aa23.05■■□□□ 1.28
RBBP4-203ENST00000401893 DNAJC5Q9H3Z4 198 aa23.04■■□□□ 1.28
RBBP4-203ENST00000401893 CCDC88BA6NC98 1476 aa23.03■■□□□ 1.28
RBBP4-203ENST00000401893 PRDM2Q13029 1718 aa23■■□□□ 1.27
RBBP4-203ENST00000401893 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
RBBP4-203ENST00000401893 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
RBBP4-203ENST00000401893 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
RBBP4-203ENST00000401893 SUPT5HO00267 1087 aaKnown RBP22.68■■□□□ 1.22
RBBP4-203ENST00000401893 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
RBBP4-203ENST00000401893 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
RBBP4-203ENST00000401893 ZNF608Q9ULD9 1512 aaPredicted RBP22.51■■□□□ 1.19
RBBP4-203ENST00000401893 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
RBBP4-203ENST00000401893 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
RBBP4-203ENST00000401893 OSCARQ8IYS5 282 aa22.45■■□□□ 1.18
RBBP4-203ENST00000401893 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
RBBP4-203ENST00000401893 CUX1P39880 1505 aa22.38■■□□□ 1.17
RBBP4-203ENST00000401893 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
RBBP4-203ENST00000401893 SOGA1O94964 1423 aa22.38■■□□□ 1.17
RBBP4-203ENST00000401893 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
RBBP4-203ENST00000401893 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.172e-9■■■■■ 45.9
RBBP4-203ENST00000401893 WDR97A6NE52 1622 aa22.31■■□□□ 1.16
RBBP4-203ENST00000401893 TDRD9Q8NDG6 1382 aaKnown RBP22.27■■□□□ 1.16
RBBP4-203ENST00000401893 CHD1O14646 1710 aa22.23■■□□□ 1.15
RBBP4-203ENST00000401893 FBLN2P98095 1184 aa22.2■■□□□ 1.14
RBBP4-203ENST00000401893 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
RBBP4-203ENST00000401893 GRIN2BQ13224 1484 aa22.17■■□□□ 1.14
RBBP4-203ENST00000401893 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
RBBP4-203ENST00000401893 SNAPC4Q5SXM2 1469 aa22.16■■□□□ 1.14
RBBP4-203ENST00000401893 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
RBBP4-203ENST00000401893 TOP2BQ02880 1626 aa22.15■■□□□ 1.14
RBBP4-203ENST00000401893 ABCA10Q8WWZ4 1543 aa22.15■■□□□ 1.14
RBBP4-203ENST00000401893 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
RBBP4-203ENST00000401893 PBRM1Q86U86 1689 aa22.12■■□□□ 1.13
RBBP4-203ENST00000401893 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
RBBP4-203ENST00000401893 RIMBP3CA6NJZ7 1639 aa22.11■■□□□ 1.13
RBBP4-203ENST00000401893 RIMBP3BA6NNM3 1639 aa22.11■■□□□ 1.13
RBBP4-203ENST00000401893 RIMBP3Q9UFD9 1639 aa22.11■■□□□ 1.13
RBBP4-203ENST00000401893 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
RBBP4-203ENST00000401893 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
RBBP4-203ENST00000401893 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
RBBP4-203ENST00000401893 ARHGEF11O15085 1522 aa22.07■■□□□ 1.12
RBBP4-203ENST00000401893 SYNJ2O15056 1496 aa22.06■■□□□ 1.12
RBBP4-203ENST00000401893 CLASP1Q7Z460 1538 aa21.96■■□□□ 1.11
RBBP4-203ENST00000401893 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
RBBP4-203ENST00000401893 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
RBBP4-203ENST00000401893 CYB5RLQ6IPT4 315 aa21.88■■□□□ 1.09
RBBP4-203ENST00000401893 GRIN2AQ12879 1464 aa21.87■■□□□ 1.09
RBBP4-203ENST00000401893 FHAD1B1AJZ9 1412 aa21.86■■□□□ 1.09
RBBP4-203ENST00000401893 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
RBBP4-203ENST00000401893 NUP160Q12769 1436 aa21.76■■□□□ 1.07
RBBP4-203ENST00000401893 CEP170Q5SW79 1584 aa21.76■■□□□ 1.07
RBBP4-203ENST00000401893 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
RBBP4-203ENST00000401893 CUL7Q14999 1698 aa21.67■■□□□ 1.06
RBBP4-203ENST00000401893 SHROOM2Q13796 1616 aa21.65■■□□□ 1.06
RBBP4-203ENST00000401893 IGF1RP08069 1367 aa21.62■■□□□ 1.05
RBBP4-203ENST00000401893 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
RBBP4-203ENST00000401893 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
RBBP4-203ENST00000401893 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms