RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
RBBP4-216ENST00000525506 CCDC180Q9P1Z9 1646 aa23.09■■□□□ 1.29
RBBP4-216ENST00000525506 ABCC9O60706 1549 aa22.97■■□□□ 1.27
RBBP4-216ENST00000525506 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
RBBP4-216ENST00000525506 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
RBBP4-216ENST00000525506 NACADO15069 1562 aa21.77■■□□□ 1.08
RBBP4-216ENST00000525506 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
RBBP4-216ENST00000525506 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
RBBP4-216ENST00000525506 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.02
RBBP4-216ENST00000525506 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
RBBP4-216ENST00000525506 DNAJC5BQ9UF47 199 aa21.4■■□□□ 1.02
RBBP4-216ENST00000525506 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
RBBP4-216ENST00000525506 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
RBBP4-216ENST00000525506 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
RBBP4-216ENST00000525506 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
RBBP4-216ENST00000525506 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
RBBP4-216ENST00000525506 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
RBBP4-216ENST00000525506 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
RBBP4-216ENST00000525506 SMARCA4P51532 1647 aa20.13■□□□□ 0.81
RBBP4-216ENST00000525506 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
RBBP4-216ENST00000525506 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
RBBP4-216ENST00000525506 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
RBBP4-216ENST00000525506 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
RBBP4-216ENST00000525506 HMGXB3Q12766 1538 aa19.96■□□□□ 0.79
RBBP4-216ENST00000525506 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
RBBP4-216ENST00000525506 BAZ1BQ9UIG0 1483 aaKnown RBP19.9■□□□□ 0.78
RBBP4-216ENST00000525506 PEG3Q9GZU2 1588 aa19.89■□□□□ 0.77
RBBP4-216ENST00000525506 NESP48681 1621 aa19.8■□□□□ 0.76
RBBP4-216ENST00000525506 ERCC6Q03468 1493 aa19.78■□□□□ 0.76
RBBP4-216ENST00000525506 WIZO95785 1651 aa19.76■□□□□ 0.75
RBBP4-216ENST00000525506 CUX2O14529 1486 aa19.62■□□□□ 0.73
RBBP4-216ENST00000525506 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
RBBP4-216ENST00000525506 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
RBBP4-216ENST00000525506 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
RBBP4-216ENST00000525506 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
RBBP4-216ENST00000525506 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
RBBP4-216ENST00000525506 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
RBBP4-216ENST00000525506 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
RBBP4-216ENST00000525506 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
RBBP4-216ENST00000525506 CFTRP13569 1480 aa19.32■□□□□ 0.68
RBBP4-216ENST00000525506 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
RBBP4-216ENST00000525506 FANCD2Q9BXW9 1451 aa19.3■□□□□ 0.68
RBBP4-216ENST00000525506 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
RBBP4-216ENST00000525506 WDR62O43379 1518 aa19.27■□□□□ 0.68
RBBP4-216ENST00000525506 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
RBBP4-216ENST00000525506 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
RBBP4-216ENST00000525506 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
RBBP4-216ENST00000525506 TOPBP1Q92547 1522 aa18.97■□□□□ 0.63
RBBP4-216ENST00000525506 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
RBBP4-216ENST00000525506 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
RBBP4-216ENST00000525506 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
RBBP4-216ENST00000525506 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
RBBP4-216ENST00000525506 ABCC8Q09428 1581 aa18.87■□□□□ 0.61
RBBP4-216ENST00000525506 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
RBBP4-216ENST00000525506 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
RBBP4-216ENST00000525506 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
RBBP4-216ENST00000525506 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
RBBP4-216ENST00000525506 AQRO60306 1485 aaKnown RBP eCLIP18.75■□□□□ 0.592e-9■■■■■ 61.7
RBBP4-216ENST00000525506 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
RBBP4-216ENST00000525506 CUX1P39880 1505 aa18.74■□□□□ 0.59
RBBP4-216ENST00000525506 TRIM41Q8WV44 630 aa18.73■□□□□ 0.59
RBBP4-216ENST00000525506 SOGA1O94964 1423 aa18.7■□□□□ 0.58
RBBP4-216ENST00000525506 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
RBBP4-216ENST00000525506 CHD1O14646 1710 aa18.66■□□□□ 0.58
RBBP4-216ENST00000525506 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
RBBP4-216ENST00000525506 FBLN2P98095 1184 aa18.6■□□□□ 0.57
RBBP4-216ENST00000525506 RIMBP3CA6NJZ7 1639 aa18.58■□□□□ 0.56
RBBP4-216ENST00000525506 RIMBP3BA6NNM3 1639 aa18.58■□□□□ 0.56
RBBP4-216ENST00000525506 RIMBP3Q9UFD9 1639 aa18.58■□□□□ 0.56
RBBP4-216ENST00000525506 WDR97A6NE52 1622 aa18.57■□□□□ 0.56
RBBP4-216ENST00000525506 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
RBBP4-216ENST00000525506 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
RBBP4-216ENST00000525506 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
RBBP4-216ENST00000525506 GRIN2BQ13224 1484 aa18.49■□□□□ 0.55
RBBP4-216ENST00000525506 SYNJ1O43426 1573 aa18.48■□□□□ 0.55
RBBP4-216ENST00000525506 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
RBBP4-216ENST00000525506 GAPVD1Q14C86 1478 aa18.47■□□□□ 0.55
RBBP4-216ENST00000525506 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
RBBP4-216ENST00000525506 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
RBBP4-216ENST00000525506 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
RBBP4-216ENST00000525506 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.54
RBBP4-216ENST00000525506 CHMP7Q8WUX9 453 aaPredicted RBP18.45■□□□□ 0.54
RBBP4-216ENST00000525506 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
RBBP4-216ENST00000525506 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
RBBP4-216ENST00000525506 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
RBBP4-216ENST00000525506 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
RBBP4-216ENST00000525506 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
RBBP4-216ENST00000525506 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
RBBP4-216ENST00000525506 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
RBBP4-216ENST00000525506 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
RBBP4-216ENST00000525506 CEP170Q5SW79 1584 aa18.23■□□□□ 0.51
RBBP4-216ENST00000525506 FHAD1B1AJZ9 1412 aa18.22■□□□□ 0.51
RBBP4-216ENST00000525506 ERCC6L2Q5T890 1561 aa18.18■□□□□ 0.5
RBBP4-216ENST00000525506 NUP160Q12769 1436 aa18.18■□□□□ 0.5
RBBP4-216ENST00000525506 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
RBBP4-216ENST00000525506 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
RBBP4-216ENST00000525506 KIF27Q86VH2 1401 aa18.08■□□□□ 0.49
RBBP4-216ENST00000525506 IGF1RP08069 1367 aa18.08■□□□□ 0.49
RBBP4-216ENST00000525506 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
RBBP4-216ENST00000525506 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms