RNA–Protein interactions for RNA: ENST00000490500.5

RBBP4-213, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-213ENST00000490500 NISCHQ9Y2I1 1504 aa31.12■■■□□ 2.57
RBBP4-213ENST00000490500 ABCC9O60706 1549 aa27.92■■■□□ 2.06
RBBP4-213ENST00000490500 CCDC180Q9P1Z9 1646 aa27.81■■■□□ 2.04
RBBP4-213ENST00000490500 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
RBBP4-213ENST00000490500 NACADO15069 1562 aa26.37■■□□□ 1.81
RBBP4-213ENST00000490500 DNAJC5BQ9UF47 199 aa26.31■■□□□ 1.8
RBBP4-213ENST00000490500 DCAF8L2P0C7V8 631 aa26.29■■□□□ 1.8
RBBP4-213ENST00000490500 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
RBBP4-213ENST00000490500 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.76
RBBP4-213ENST00000490500 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
RBBP4-213ENST00000490500 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
RBBP4-213ENST00000490500 BICRAQ9NZM4 1560 aa25.79■■□□□ 1.72
RBBP4-213ENST00000490500 DCAF1Q9Y4B6 1507 aa25.71■■□□□ 1.71
RBBP4-213ENST00000490500 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.66
RBBP4-213ENST00000490500 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
RBBP4-213ENST00000490500 CC2D2AQ9P2K1 1620 aa25.18■■□□□ 1.62
RBBP4-213ENST00000490500 CECR2Q9BXF3 1484 aa25.16■■□□□ 1.62
RBBP4-213ENST00000490500 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.62
RBBP4-213ENST00000490500 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
RBBP4-213ENST00000490500 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
RBBP4-213ENST00000490500 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
RBBP4-213ENST00000490500 SMARCA2P51531 1590 aa24.2■■□□□ 1.46
RBBP4-213ENST00000490500 HMGXB3Q12766 1538 aa24.16■■□□□ 1.46
RBBP4-213ENST00000490500 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
RBBP4-213ENST00000490500 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
RBBP4-213ENST00000490500 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
RBBP4-213ENST00000490500 CUX2O14529 1486 aa24.06■■□□□ 1.44
RBBP4-213ENST00000490500 BAZ1BQ9UIG0 1483 aaKnown RBP24.04■■□□□ 1.44
RBBP4-213ENST00000490500 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
RBBP4-213ENST00000490500 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
RBBP4-213ENST00000490500 NESP48681 1621 aa23.99■■□□□ 1.43
RBBP4-213ENST00000490500 LAMC3Q9Y6N6 1575 aa23.77■■□□□ 1.4
RBBP4-213ENST00000490500 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
RBBP4-213ENST00000490500 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
RBBP4-213ENST00000490500 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
RBBP4-213ENST00000490500 WIZO95785 1651 aa23.62■■□□□ 1.37
RBBP4-213ENST00000490500 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
RBBP4-213ENST00000490500 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
RBBP4-213ENST00000490500 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
RBBP4-213ENST00000490500 WDR62O43379 1518 aa23.4■■□□□ 1.34
RBBP4-213ENST00000490500 CFTRP13569 1480 aa23.39■■□□□ 1.34
RBBP4-213ENST00000490500 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
RBBP4-213ENST00000490500 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
RBBP4-213ENST00000490500 TOP2AP11388 1531 aaKnown RBP23.36■■□□□ 1.33
RBBP4-213ENST00000490500 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
RBBP4-213ENST00000490500 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
RBBP4-213ENST00000490500 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
RBBP4-213ENST00000490500 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
RBBP4-213ENST00000490500 IFT140Q96RY7 1462 aa22.93■■□□□ 1.26
RBBP4-213ENST00000490500 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
RBBP4-213ENST00000490500 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
RBBP4-213ENST00000490500 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
RBBP4-213ENST00000490500 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
RBBP4-213ENST00000490500 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
RBBP4-213ENST00000490500 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.232e-9■□□□□ 9.5
RBBP4-213ENST00000490500 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
RBBP4-213ENST00000490500 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
RBBP4-213ENST00000490500 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
RBBP4-213ENST00000490500 RAD54L2Q9Y4B4 1467 aa22.62■■□□□ 1.21
RBBP4-213ENST00000490500 RIMBP3CA6NJZ7 1639 aa22.61■■□□□ 1.21
RBBP4-213ENST00000490500 RIMBP3BA6NNM3 1639 aa22.61■■□□□ 1.21
RBBP4-213ENST00000490500 RIMBP3Q9UFD9 1639 aa22.61■■□□□ 1.21
RBBP4-213ENST00000490500 SOGA1O94964 1423 aa22.61■■□□□ 1.21
RBBP4-213ENST00000490500 ARHGEF11O15085 1522 aa22.58■■□□□ 1.21
RBBP4-213ENST00000490500 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
RBBP4-213ENST00000490500 FBLN2P98095 1184 aa22.54■■□□□ 1.2
RBBP4-213ENST00000490500 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
RBBP4-213ENST00000490500 CUX1P39880 1505 aa22.52■■□□□ 1.19
RBBP4-213ENST00000490500 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
RBBP4-213ENST00000490500 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
RBBP4-213ENST00000490500 CHD1O14646 1710 aa22.45■■□□□ 1.19
RBBP4-213ENST00000490500 SNAPC4Q5SXM2 1469 aa22.44■■□□□ 1.18
RBBP4-213ENST00000490500 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
RBBP4-213ENST00000490500 CHMP7Q8WUX9 453 aaPredicted RBP22.4■■□□□ 1.18
RBBP4-213ENST00000490500 GRIN2BQ13224 1484 aa22.39■■□□□ 1.17
RBBP4-213ENST00000490500 ARAP1Q96P48 1450 aa22.39■■□□□ 1.17
RBBP4-213ENST00000490500 MAGI1Q96QZ7 1491 aaPredicted RBP22.38■■□□□ 1.17
RBBP4-213ENST00000490500 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
RBBP4-213ENST00000490500 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
RBBP4-213ENST00000490500 GAPVD1Q14C86 1478 aa22.31■■□□□ 1.16
RBBP4-213ENST00000490500 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
RBBP4-213ENST00000490500 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
RBBP4-213ENST00000490500 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.15
RBBP4-213ENST00000490500 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.15
RBBP4-213ENST00000490500 TRHP20396 242 aaPredicted RBP22.18■■□□□ 1.14
RBBP4-213ENST00000490500 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
RBBP4-213ENST00000490500 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
RBBP4-213ENST00000490500 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
RBBP4-213ENST00000490500 BIVM-ERCC5R4GMW8 1640 aa22.09■■□□□ 1.13
RBBP4-213ENST00000490500 NUP160Q12769 1436 aa22.06■■□□□ 1.12
RBBP4-213ENST00000490500 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
RBBP4-213ENST00000490500 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
RBBP4-213ENST00000490500 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
RBBP4-213ENST00000490500 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
RBBP4-213ENST00000490500 ERCC6L2Q5T890 1561 aa21.97■■□□□ 1.11
RBBP4-213ENST00000490500 SHROOM2Q13796 1616 aa21.88■■□□□ 1.09
RBBP4-213ENST00000490500 JPH4Q96JJ6 628 aa21.87■■□□□ 1.09
RBBP4-213ENST00000490500 PRG4Q92954 1404 aaPredicted RBP21.83■■□□□ 1.09
RBBP4-213ENST00000490500 IGF1RP08069 1367 aa21.8■■□□□ 1.08
RBBP4-213ENST00000490500 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms