Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.332e-8■■■■□ 20.9
SND1Q7KZF4 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.042e-8■■■■□ 20.9
SND1Q7KZF4 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC14.47□□□□□ -0.092e-8■■■■□ 20.9
SND1Q7KZF4 POR-219ENST00000471238 600 ntTSL 318.12■□□□□ 0.499e-11■■■■□ 20.9
SND1Q7KZF4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.818e-8■■■■□ 20.9
SND1Q7KZF4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.1■□□□□ 0.498e-8■■■■□ 20.9
SND1Q7KZF4 ANGPTL4-205ENST00000594875 531 ntTSL 217.78■□□□□ 0.448e-8■■■■□ 20.9
SND1Q7KZF4 ANGPTL4-203ENST00000593998 1798 ntTSL 1 (best)17.57■□□□□ 0.48e-8■■■■□ 20.9
SND1Q7KZF4 ANGPTL4-206ENST00000595079 1719 ntTSL 217.1■□□□□ 0.338e-8■■■■□ 20.9
SND1Q7KZF4 MAN1B1-203ENST00000474902 2336 ntTSL 217.2■□□□□ 0.342e-7■■■■□ 20.9
SND1Q7KZF4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.242e-7■■■■□ 20.9
SND1Q7KZF4 MAN1B1-213ENST00000544448 2090 ntTSL 1 (best)15.29■□□□□ 0.042e-7■■■■□ 20.9
SND1Q7KZF4 CRELD2-205ENST00000444954 598 ntTSL 320.55■□□□□ 0.881e-7■■■■□ 20.9
SND1Q7KZF4 CRELD2-207ENST00000462253 471 ntTSL 518.4■□□□□ 0.541e-7■■■■□ 20.9
SND1Q7KZF4 SLC2A4-205ENST00000572485 2995 ntTSL 1 (best)17.07■□□□□ 0.321e-7■■■■□ 20.9
SND1Q7KZF4 SLC2A4-203ENST00000570783 1813 ntTSL 317.05■□□□□ 0.321e-7■■■■□ 20.9
SND1Q7KZF4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.28■□□□□ 0.21e-7■■■■□ 20.9
SND1Q7KZF4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.16■□□□□ 0.181e-7■■■■□ 20.9
SND1Q7KZF4 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.321e-7■■■■□ 20.9
SND1Q7KZF4 ZMPSTE24-203ENST00000474142 530 ntTSL 29.44□□□□□ -0.97e-11■■■■□ 20.9
SND1Q7KZF4 CADM1-211ENST00000541434 1112 ntTSL 1 (best)16.43■□□□□ 0.223e-7■■■■□ 20.9
SND1Q7KZF4 TWSG1-203ENST00000583147 2311 ntTSL 221.91■■□□□ 1.13e-6■■■■□ 20.9
SND1Q7KZF4 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 03e-6■■■■□ 20.9
SND1Q7KZF4 DDB1-219ENST00000541513 958 ntTSL 48.24□□□□□ -1.091e-6■■■■□ 20.9
SND1Q7KZF4 SERPINF1-209ENST00000573763 729 ntTSL 38.97□□□□□ -0.973e-26■■■■□ 20.9
SND1Q7KZF4 BCAP31-206ENST00000442093 793 ntTSL 223.47■■□□□ 1.353e-15■■■■□ 20.9
SND1Q7KZF4 BCAP31-204ENST00000429550 684 ntTSL 321.05■□□□□ 0.963e-15■■■■□ 20.9
SND1Q7KZF4 CLU-213ENST00000522502 594 ntTSL 210.39□□□□□ -0.754e-17■■■■□ 20.8
SND1Q7KZF4 ILVBL-210ENST00000534806 1033 ntTSL 513.89□□□□□ -0.194e-7■■■■□ 20.8
SND1Q7KZF4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.471e-14■■■■□ 20.8
SND1Q7KZF4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.071e-14■■■■□ 20.8
SND1Q7KZF4 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.081e-14■■■■□ 20.8
SND1Q7KZF4 ECE1-212ENST00000528294 576 ntTSL 414.45□□□□□ -0.12e-6■■■■□ 20.8
SND1Q7KZF4 ABCB1-206ENST00000483831 642 ntTSL 38.78□□□□□ -13e-6■■■■□ 20.8
SND1Q7KZF4 AC090004.1-203ENST00000626721 886 ntTSL 59.48□□□□□ -0.897e-11■■■■□ 20.8
SND1Q7KZF4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.799e-9■■■■□ 20.8
SND1Q7KZF4 HNRNPL-212ENST00000601449 1918 ntTSL 518.12■□□□□ 0.499e-9■■■■□ 20.8
SND1Q7KZF4 HNRNPL-203ENST00000595164 2404 ntTSL 214.74□□□□□ -0.059e-9■■■■□ 20.8
SND1Q7KZF4 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC14.08□□□□□ -0.169e-9■■■■□ 20.8
SND1Q7KZF4 LAMP1-202ENST00000471046 424 ntTSL 313.27□□□□□ -0.294e-26■■■■□ 20.8
SND1Q7KZF4 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.429e-9■■■■□ 20.8
SND1Q7KZF4 HNRNPL-204ENST00000595443 2122 ntTSL 212.35□□□□□ -0.439e-9■■■■□ 20.8
SND1Q7KZF4 HNRNPL-202ENST00000388749 1952 ntTSL 511.82□□□□□ -0.529e-9■■■■□ 20.8
SND1Q7KZF4 HNRNPL-206ENST00000597731 3094 ntTSL 211.41□□□□□ -0.589e-9■■■■□ 20.8
SND1Q7KZF4 HNRNPL-205ENST00000595804 588 ntTSL 29.68□□□□□ -0.869e-9■■■■□ 20.8
SND1Q7KZF4 AC008982.1-202ENST00000602021 342 ntTSL 58.2□□□□□ -1.19e-9■■■■□ 20.8
SND1Q7KZF4 TFPI-212ENST00000481389 599 ntTSL 56.06□□□□□ -1.442e-7■■■■□ 20.8
SND1Q7KZF4 TMEM41B-206ENST00000533867 966 ntTSL 210.71□□□□□ -0.692e-7■■■■□ 20.8
SND1Q7KZF4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.57e-14■■■■□ 20.8
SND1Q7KZF4 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.277e-14■■■■□ 20.8
SND1Q7KZF4 FAM178B-202ENST00000470789 722 ntTSL 1 (best)11.68□□□□□ -0.547e-14■■■■□ 20.8
SND1Q7KZF4 RNASET2-211ENST00000509073 433 ntTSL 27.86□□□□□ -1.152e-14■■■■□ 20.8
SND1Q7KZF4 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC14.31□□□□□ -0.129e-7■■■■□ 20.8
SND1Q7KZF4 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.829e-12■■■■□ 20.8
SND1Q7KZF4 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.859e-12■■■■□ 20.8
SND1Q7KZF4 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.869e-12■■■■□ 20.8
SND1Q7KZF4 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.52□□□□□ -0.899e-12■■■■□ 20.8
SND1Q7KZF4 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.949e-12■■■■□ 20.8
SND1Q7KZF4 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.949e-12■■■■□ 20.8
SND1Q7KZF4 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.999e-12■■■■□ 20.8
SND1Q7KZF4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.019e-12■■■■□ 20.8
SND1Q7KZF4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.019e-12■■■■□ 20.8
SND1Q7KZF4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.039e-12■■■■□ 20.8
SND1Q7KZF4 CD46-212ENST00000469535 7826 ntTSL 1 (best)7.84□□□□□ -1.169e-12■■■■□ 20.8
SND1Q7KZF4 PLPP3-203ENST00000461655 646 ntTSL 35.68□□□□□ -1.53e-7■■■■□ 20.8
SND1Q7KZF4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.274e-31■■■■□ 20.8
SND1Q7KZF4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.522e-6■■■■□ 20.8
SND1Q7KZF4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.94■□□□□ 0.462e-6■■■■□ 20.8
SND1Q7KZF4 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.142e-6■■■■□ 20.8
SND1Q7KZF4 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.142e-6■■■■□ 20.8
SND1Q7KZF4 PLPP3-204ENST00000472957 696 ntTSL 413.04□□□□□ -0.321e-6■■■■□ 20.8
SND1Q7KZF4 PLPP3-202ENST00000459962 2039 ntTSL 29.34□□□□□ -0.911e-6■■■■□ 20.8
SND1Q7KZF4 PHGDH-231ENST00000641939 540 nt15.55■□□□□ 0.082e-7■■■■□ 20.7
SND1Q7KZF4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.38■■□□□ 1.654e-7■■■■□ 20.7
SND1Q7KZF4 RUNX1-204ENST00000399237 822 ntTSL 521.99■■□□□ 1.114e-7■■■■□ 20.7
SND1Q7KZF4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.01■□□□□ 0.634e-7■■■■□ 20.7
SND1Q7KZF4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.83■□□□□ 0.63e-10■■■■□ 20.7
SND1Q7KZF4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.33■□□□□ 0.523e-10■■■■□ 20.7
SND1Q7KZF4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.294e-7■■■■□ 20.7
SND1Q7KZF4 RPA2-205ENST00000444045 682 ntTSL 515.4■□□□□ 0.063e-10■■■■□ 20.7
SND1Q7KZF4 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.023e-10■■■■□ 20.7
SND1Q7KZF4 RUNX1-213ENST00000469087 1790 ntTSL 1 (best)13.33□□□□□ -0.284e-7■■■■□ 20.7
SND1Q7KZF4 SORT1-204ENST00000482236 615 ntTSL 311.67□□□□□ -0.543e-9■■■■□ 20.7
SND1Q7KZF4 SORT1-205ENST00000483508 759 ntTSL 38.84□□□□□ -0.993e-9■■■■□ 20.7
SND1Q7KZF4 SORT1-207ENST00000493736 583 ntTSL 27.88□□□□□ -1.153e-9■■■■□ 20.7
SND1Q7KZF4 SORT1-210ENST00000633956 561 ntTSL 45.75□□□□□ -1.493e-9■■■■□ 20.7
SND1Q7KZF4 GAPDH-209ENST00000492719 930 ntTSL 313.75□□□□□ -0.211e-26■■■■□ 20.7
SND1Q7KZF4 P3H1-210ENST00000463465 897 ntTSL 321.89■■□□□ 1.097e-7■■■■□ 20.7
SND1Q7KZF4 COL9A2-203ENST00000417105 677 ntTSL 522.72■■□□□ 1.231e-6■■■■□ 20.7
SND1Q7KZF4 COL9A2-208ENST00000488463 1005 ntTSL 514.63□□□□□ -0.071e-6■■■■□ 20.7
SND1Q7KZF4 HSD17B2-205ENST00000568090 865 ntTSL 39.21□□□□□ -0.941e-6■■■■□ 20.7
SND1Q7KZF4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.383e-7■■■■□ 20.7
SND1Q7KZF4 CD151-220ENST00000532045 1803 ntTSL 522.77■■□□□ 1.243e-7■■■■□ 20.7
SND1Q7KZF4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.853e-7■■■■□ 20.7
SND1Q7KZF4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.753e-7■■■■□ 20.7
SND1Q7KZF4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.553e-7■■■■□ 20.7
SND1Q7KZF4 CD151-218ENST00000530726 1407 ntTSL 513.76□□□□□ -0.213e-7■■■■□ 20.7
SND1Q7KZF4 FGA-203ENST00000622532 1130 ntTSL 5 BASIC10.41□□□□□ -0.743e-55■■■■□ 20.7
SND1Q7KZF4 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC9.86□□□□□ -0.833e-55■■■■□ 20.7
SND1Q7KZF4 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.143e-55■■■■□ 20.7
Retrieved 100 of 13,567 protein–RNA pairs in 97.3 ms