RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.96
SORT1-204ENST00000482236 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
SORT1-204ENST00000482236 ABCC9O60706 1549 aa24.18■■□□□ 1.46
SORT1-204ENST00000482236 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
SORT1-204ENST00000482236 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
SORT1-204ENST00000482236 NACADO15069 1562 aa22.97■■□□□ 1.27
SORT1-204ENST00000482236 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
SORT1-204ENST00000482236 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
SORT1-204ENST00000482236 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
SORT1-204ENST00000482236 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
SORT1-204ENST00000482236 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
SORT1-204ENST00000482236 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
SORT1-204ENST00000482236 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
SORT1-204ENST00000482236 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
SORT1-204ENST00000482236 SHROOM4Q9ULL8 1493 aa22.1■■□□□ 1.13
SORT1-204ENST00000482236 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
SORT1-204ENST00000482236 CC2D2AQ9P2K1 1620 aa21.78■■□□□ 1.08
SORT1-204ENST00000482236 CECR2Q9BXF3 1484 aa21.73■■□□□ 1.07
SORT1-204ENST00000482236 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
SORT1-204ENST00000482236 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
SORT1-204ENST00000482236 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
SORT1-204ENST00000482236 ATAD2BQ9ULI0 1458 aa21.16■□□□□ 0.98
SORT1-204ENST00000482236 NCAPD3P42695 1498 aa21.14■□□□□ 0.98
SORT1-204ENST00000482236 BAZ1BQ9UIG0 1483 aaKnown RBP21.08■□□□□ 0.97
SORT1-204ENST00000482236 HMGXB3Q12766 1538 aa21.07■□□□□ 0.96
SORT1-204ENST00000482236 MROH2BQ7Z745 1585 aa21.01■□□□□ 0.95
SORT1-204ENST00000482236 ERCC6Q03468 1493 aa20.97■□□□□ 0.95
SORT1-204ENST00000482236 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
SORT1-204ENST00000482236 WIZO95785 1651 aa20.79■□□□□ 0.92
SORT1-204ENST00000482236 NESP48681 1621 aa20.78■□□□□ 0.92
SORT1-204ENST00000482236 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
SORT1-204ENST00000482236 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
SORT1-204ENST00000482236 CUX2O14529 1486 aa20.68■□□□□ 0.9
SORT1-204ENST00000482236 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
SORT1-204ENST00000482236 CADPSQ9ULU8 1353 aa20.59■□□□□ 0.89
SORT1-204ENST00000482236 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.89
SORT1-204ENST00000482236 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.88
SORT1-204ENST00000482236 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
SORT1-204ENST00000482236 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
SORT1-204ENST00000482236 MRC2Q9UBG0 1479 aa20.42■□□□□ 0.86
SORT1-204ENST00000482236 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
SORT1-204ENST00000482236 CFTRP13569 1480 aa20.37■□□□□ 0.85
SORT1-204ENST00000482236 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
SORT1-204ENST00000482236 WDR62O43379 1518 aa20.29■□□□□ 0.84
SORT1-204ENST00000482236 DNAJC5Q9H3Z4 198 aa20.27■□□□□ 0.84
SORT1-204ENST00000482236 PRDM2Q13029 1718 aa20.2■□□□□ 0.82
SORT1-204ENST00000482236 SUPT5HO00267 1087 aaKnown RBP20.2■□□□□ 0.82
SORT1-204ENST00000482236 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.81
SORT1-204ENST00000482236 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
SORT1-204ENST00000482236 TOPBP1Q92547 1522 aa20.01■□□□□ 0.79
SORT1-204ENST00000482236 DNMBPQ6XZF7 1577 aa19.98■□□□□ 0.79
SORT1-204ENST00000482236 IFT140Q96RY7 1462 aa19.98■□□□□ 0.79
SORT1-204ENST00000482236 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
SORT1-204ENST00000482236 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
SORT1-204ENST00000482236 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
SORT1-204ENST00000482236 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
SORT1-204ENST00000482236 SOGA1O94964 1423 aa19.77■□□□□ 0.76
SORT1-204ENST00000482236 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.76
SORT1-204ENST00000482236 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
SORT1-204ENST00000482236 FBLN2P98095 1184 aa19.75■□□□□ 0.75
SORT1-204ENST00000482236 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.75
SORT1-204ENST00000482236 TRIM41Q8WV44 630 aa19.74■□□□□ 0.75
SORT1-204ENST00000482236 CUX1P39880 1505 aa19.74■□□□□ 0.75
SORT1-204ENST00000482236 TARBP1Q13395 1621 aaKnown RBP19.73■□□□□ 0.75
SORT1-204ENST00000482236 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
SORT1-204ENST00000482236 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
SORT1-204ENST00000482236 SNAPC4Q5SXM2 1469 aa19.6■□□□□ 0.73
SORT1-204ENST00000482236 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
SORT1-204ENST00000482236 CHD1O14646 1710 aa19.59■□□□□ 0.73
SORT1-204ENST00000482236 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.72
SORT1-204ENST00000482236 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
SORT1-204ENST00000482236 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
SORT1-204ENST00000482236 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
SORT1-204ENST00000482236 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
SORT1-204ENST00000482236 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
SORT1-204ENST00000482236 SYNJ1O43426 1573 aa19.5■□□□□ 0.71
SORT1-204ENST00000482236 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
SORT1-204ENST00000482236 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
SORT1-204ENST00000482236 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
SORT1-204ENST00000482236 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
SORT1-204ENST00000482236 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
SORT1-204ENST00000482236 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
SORT1-204ENST00000482236 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
SORT1-204ENST00000482236 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
SORT1-204ENST00000482236 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
SORT1-204ENST00000482236 ADAMTS12P58397 1594 aa19.33■□□□□ 0.69
SORT1-204ENST00000482236 CLASP1Q7Z460 1538 aa19.31■□□□□ 0.68
SORT1-204ENST00000482236 GRIN2AQ12879 1464 aa19.3■□□□□ 0.68
SORT1-204ENST00000482236 FHAD1B1AJZ9 1412 aa19.3■□□□□ 0.68
SORT1-204ENST00000482236 ERICH3Q5RHP9 1530 aa19.3■□□□□ 0.68
SORT1-204ENST00000482236 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
SORT1-204ENST00000482236 KIF27Q86VH2 1401 aa19.24■□□□□ 0.67
SORT1-204ENST00000482236 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
SORT1-204ENST00000482236 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
SORT1-204ENST00000482236 NUP160Q12769 1436 aa19.17■□□□□ 0.66
SORT1-204ENST00000482236 CUL7Q14999 1698 aa19.11■□□□□ 0.65
SORT1-204ENST00000482236 IGF1RP08069 1367 aa19.06■□□□□ 0.64
SORT1-204ENST00000482236 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
SORT1-204ENST00000482236 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
SORT1-204ENST00000482236 ERCC6L2Q5T890 1561 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms