RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
LAMP1-202ENST00000471046 ABCC9O60706 1549 aa30.49■■■□□ 2.47
LAMP1-202ENST00000471046 CCDC180Q9P1Z9 1646 aa30.16■■■□□ 2.42
LAMP1-202ENST00000471046 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.23
LAMP1-202ENST00000471046 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
LAMP1-202ENST00000471046 NACADO15069 1562 aa28.5■■■□□ 2.15
LAMP1-202ENST00000471046 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
LAMP1-202ENST00000471046 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
LAMP1-202ENST00000471046 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
LAMP1-202ENST00000471046 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
LAMP1-202ENST00000471046 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
LAMP1-202ENST00000471046 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
LAMP1-202ENST00000471046 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
LAMP1-202ENST00000471046 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
LAMP1-202ENST00000471046 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
LAMP1-202ENST00000471046 EIF4G1Q04637 1599 aaKnown RBP27.41■■□□□ 1.98
LAMP1-202ENST00000471046 DCAF1Q9Y4B6 1507 aa27.39■■□□□ 1.98
LAMP1-202ENST00000471046 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
LAMP1-202ENST00000471046 DNAJC5Q9H3Z4 198 aa26.96■■□□□ 1.91
LAMP1-202ENST00000471046 CUX2O14529 1486 aa26.51■■□□□ 1.83
LAMP1-202ENST00000471046 ERCC6Q03468 1493 aa26.32■■□□□ 1.8
LAMP1-202ENST00000471046 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
LAMP1-202ENST00000471046 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
LAMP1-202ENST00000471046 HMGXB3Q12766 1538 aa26.12■■□□□ 1.77
LAMP1-202ENST00000471046 NESP48681 1621 aa26.09■■□□□ 1.77
LAMP1-202ENST00000471046 SMARCA4P51532 1647 aa26.08■■□□□ 1.77
LAMP1-202ENST00000471046 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
LAMP1-202ENST00000471046 THOC2Q8NI27 1593 aaKnown RBP26.05■■□□□ 1.76
LAMP1-202ENST00000471046 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
LAMP1-202ENST00000471046 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
LAMP1-202ENST00000471046 LAMC3Q9Y6N6 1575 aa25.84■■□□□ 1.73
LAMP1-202ENST00000471046 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
LAMP1-202ENST00000471046 BAZ1AQ9NRL2 1556 aaPredicted RBP25.79■■□□□ 1.72
LAMP1-202ENST00000471046 MROH2BQ7Z745 1585 aa25.58■■□□□ 1.69
LAMP1-202ENST00000471046 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
LAMP1-202ENST00000471046 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
LAMP1-202ENST00000471046 WDR62O43379 1518 aa25.48■■□□□ 1.67
LAMP1-202ENST00000471046 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
LAMP1-202ENST00000471046 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
LAMP1-202ENST00000471046 WIZO95785 1651 aa25.32■■□□□ 1.64
LAMP1-202ENST00000471046 CEP164Q9UPV0 1460 aa25.26■■□□□ 1.63
LAMP1-202ENST00000471046 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
LAMP1-202ENST00000471046 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
LAMP1-202ENST00000471046 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
LAMP1-202ENST00000471046 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
LAMP1-202ENST00000471046 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
LAMP1-202ENST00000471046 CFTRP13569 1480 aa25.05■■□□□ 1.6
LAMP1-202ENST00000471046 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
LAMP1-202ENST00000471046 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
LAMP1-202ENST00000471046 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
LAMP1-202ENST00000471046 ARHGEF11O15085 1522 aa24.83■■□□□ 1.57
LAMP1-202ENST00000471046 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
LAMP1-202ENST00000471046 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
LAMP1-202ENST00000471046 EIF4G3O43432 1585 aaKnown RBP24.75■■□□□ 1.55
LAMP1-202ENST00000471046 CHD1O14646 1710 aa24.75■■□□□ 1.55
LAMP1-202ENST00000471046 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
LAMP1-202ENST00000471046 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
LAMP1-202ENST00000471046 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
LAMP1-202ENST00000471046 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
LAMP1-202ENST00000471046 ARAP1Q96P48 1450 aa24.57■■□□□ 1.52
LAMP1-202ENST00000471046 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
LAMP1-202ENST00000471046 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
LAMP1-202ENST00000471046 CYB5RLQ6IPT4 315 aa24.49■■□□□ 1.51
LAMP1-202ENST00000471046 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.51
LAMP1-202ENST00000471046 TRHP20396 242 aaPredicted RBP24.38■■□□□ 1.49
LAMP1-202ENST00000471046 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
LAMP1-202ENST00000471046 CLASP1Q7Z460 1538 aa24.34■■□□□ 1.49
LAMP1-202ENST00000471046 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
LAMP1-202ENST00000471046 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
LAMP1-202ENST00000471046 FBLN2P98095 1184 aa24.26■■□□□ 1.47
LAMP1-202ENST00000471046 SNAPC4Q5SXM2 1469 aa24.25■■□□□ 1.47
LAMP1-202ENST00000471046 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
LAMP1-202ENST00000471046 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
LAMP1-202ENST00000471046 PBRM1Q86U86 1689 aa24.16■■□□□ 1.46
LAMP1-202ENST00000471046 SOGA1O94964 1423 aa24.15■■□□□ 1.46
LAMP1-202ENST00000471046 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.46
LAMP1-202ENST00000471046 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.46
LAMP1-202ENST00000471046 CUX1P39880 1505 aa24.08■■□□□ 1.45
LAMP1-202ENST00000471046 SYNJ2O15056 1496 aa24.06■■□□□ 1.44
LAMP1-202ENST00000471046 GRIN2BQ13224 1484 aa24.06■■□□□ 1.44
LAMP1-202ENST00000471046 AEBP2Q6ZN18 517 aaPredicted RBP24.03■■□□□ 1.44
LAMP1-202ENST00000471046 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
LAMP1-202ENST00000471046 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
LAMP1-202ENST00000471046 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
LAMP1-202ENST00000471046 ERCC6L2Q5T890 1561 aa23.93■■□□□ 1.42
LAMP1-202ENST00000471046 KIF13AQ9H1H9 1805 aa23.88■■□□□ 1.41
LAMP1-202ENST00000471046 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
LAMP1-202ENST00000471046 ADAMTS12P58397 1594 aa23.81■■□□□ 1.4
LAMP1-202ENST00000471046 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
LAMP1-202ENST00000471046 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
LAMP1-202ENST00000471046 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
LAMP1-202ENST00000471046 NUP160Q12769 1436 aa23.72■■□□□ 1.39
LAMP1-202ENST00000471046 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
LAMP1-202ENST00000471046 TOP2BQ02880 1626 aa23.57■■□□□ 1.36
LAMP1-202ENST00000471046 FHAD1B1AJZ9 1412 aa23.56■■□□□ 1.36
LAMP1-202ENST00000471046 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
LAMP1-202ENST00000471046 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
LAMP1-202ENST00000471046 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
LAMP1-202ENST00000471046 DIP2BQ9P265 1576 aa23.49■■□□□ 1.35
LAMP1-202ENST00000471046 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms