RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
SORT1-205ENST00000483508 ABCC9O60706 1549 aa16.73■□□□□ 0.27
SORT1-205ENST00000483508 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
SORT1-205ENST00000483508 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
SORT1-205ENST00000483508 DCAF8L2P0C7V8 631 aa15.82■□□□□ 0.12
SORT1-205ENST00000483508 NACADO15069 1562 aa15.75■□□□□ 0.11
SORT1-205ENST00000483508 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
SORT1-205ENST00000483508 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
SORT1-205ENST00000483508 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
SORT1-205ENST00000483508 MYO15BQ96JP2 1530 aa15.46■□□□□ 0.07
SORT1-205ENST00000483508 BICRAQ9NZM4 1560 aa15.35■□□□□ 0.05
SORT1-205ENST00000483508 AEBP2Q6ZN18 517 aaPredicted RBP15.3■□□□□ 0.04
SORT1-205ENST00000483508 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
SORT1-205ENST00000483508 DCAF1Q9Y4B6 1507 aa15.23■□□□□ 0.03
SORT1-205ENST00000483508 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
SORT1-205ENST00000483508 SHROOM4Q9ULL8 1493 aa15.16■□□□□ 0.02
SORT1-205ENST00000483508 CC2D2AQ9P2K1 1620 aa15.09■□□□□ 0.01
SORT1-205ENST00000483508 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
SORT1-205ENST00000483508 EIF4G1Q04637 1599 aaKnown RBP15.02■□□□□ -0
SORT1-205ENST00000483508 CHIC1Q5VXU3 224 aa14.61□□□□□ -0.07
SORT1-205ENST00000483508 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
SORT1-205ENST00000483508 ERCC6Q03468 1493 aa14.51□□□□□ -0.09
SORT1-205ENST00000483508 DNAJC5Q9H3Z4 198 aa14.5□□□□□ -0.09
SORT1-205ENST00000483508 ATAD2BQ9ULI0 1458 aa14.47□□□□□ -0.09
SORT1-205ENST00000483508 SMARCA2P51531 1590 aa14.46□□□□□ -0.09
SORT1-205ENST00000483508 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
SORT1-205ENST00000483508 CUX2O14529 1486 aa14.44□□□□□ -0.1
SORT1-205ENST00000483508 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
SORT1-205ENST00000483508 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
SORT1-205ENST00000483508 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
SORT1-205ENST00000483508 NESP48681 1621 aa14.32□□□□□ -0.12
SORT1-205ENST00000483508 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
SORT1-205ENST00000483508 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
SORT1-205ENST00000483508 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
SORT1-205ENST00000483508 PDS5BQ9NTI5 1447 aa14.18□□□□□ -0.14
SORT1-205ENST00000483508 THOC2Q8NI27 1593 aaKnown RBP14.16□□□□□ -0.14
SORT1-205ENST00000483508 KIF21AQ7Z4S6 1674 aa14.15□□□□□ -0.14
SORT1-205ENST00000483508 CADPSQ9ULU8 1353 aa14.1□□□□□ -0.15
SORT1-205ENST00000483508 WIZO95785 1651 aa14.1□□□□□ -0.15
SORT1-205ENST00000483508 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
SORT1-205ENST00000483508 CEP164Q9UPV0 1460 aa13.99□□□□□ -0.17
SORT1-205ENST00000483508 WDR62O43379 1518 aa13.97□□□□□ -0.17
SORT1-205ENST00000483508 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
SORT1-205ENST00000483508 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
SORT1-205ENST00000483508 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
SORT1-205ENST00000483508 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
SORT1-205ENST00000483508 CFTRP13569 1480 aa13.9□□□□□ -0.18
SORT1-205ENST00000483508 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.2
SORT1-205ENST00000483508 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
SORT1-205ENST00000483508 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
SORT1-205ENST00000483508 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
SORT1-205ENST00000483508 CCDC88BA6NC98 1476 aa13.75□□□□□ -0.21
SORT1-205ENST00000483508 IFT140Q96RY7 1462 aa13.7□□□□□ -0.22
SORT1-205ENST00000483508 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
SORT1-205ENST00000483508 TOPBP1Q92547 1522 aa13.67□□□□□ -0.22
SORT1-205ENST00000483508 ZNF608Q9ULD9 1512 aaPredicted RBP13.65□□□□□ -0.22
SORT1-205ENST00000483508 DNMBPQ6XZF7 1577 aa13.61□□□□□ -0.23
SORT1-205ENST00000483508 FBLN2P98095 1184 aa13.59□□□□□ -0.23
SORT1-205ENST00000483508 RIMBP3CA6NJZ7 1639 aa13.59□□□□□ -0.23
SORT1-205ENST00000483508 RIMBP3BA6NNM3 1639 aa13.59□□□□□ -0.23
SORT1-205ENST00000483508 RIMBP3Q9UFD9 1639 aa13.59□□□□□ -0.23
SORT1-205ENST00000483508 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.23
SORT1-205ENST00000483508 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
SORT1-205ENST00000483508 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
SORT1-205ENST00000483508 CYB5RLQ6IPT4 315 aa13.53□□□□□ -0.24
SORT1-205ENST00000483508 CHD1O14646 1710 aa13.51□□□□□ -0.25
SORT1-205ENST00000483508 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
SORT1-205ENST00000483508 POLA1P09884 1462 aaPredicted RBP13.51□□□□□ -0.25
SORT1-205ENST00000483508 SOGA1O94964 1423 aa13.5□□□□□ -0.25
SORT1-205ENST00000483508 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
SORT1-205ENST00000483508 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
SORT1-205ENST00000483508 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
SORT1-205ENST00000483508 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
SORT1-205ENST00000483508 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
SORT1-205ENST00000483508 SNAPC4Q5SXM2 1469 aa13.42□□□□□ -0.26
SORT1-205ENST00000483508 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
SORT1-205ENST00000483508 CUX1P39880 1505 aa13.39□□□□□ -0.27
SORT1-205ENST00000483508 ARAP1Q96P48 1450 aa13.38□□□□□ -0.27
SORT1-205ENST00000483508 SYNJ1O43426 1573 aa13.37□□□□□ -0.27
SORT1-205ENST00000483508 GRIN2BQ13224 1484 aa13.37□□□□□ -0.27
SORT1-205ENST00000483508 MAGI1Q96QZ7 1491 aaPredicted RBP13.37□□□□□ -0.27
SORT1-205ENST00000483508 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
SORT1-205ENST00000483508 GAPVD1Q14C86 1478 aa13.32□□□□□ -0.28
SORT1-205ENST00000483508 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
SORT1-205ENST00000483508 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
SORT1-205ENST00000483508 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
SORT1-205ENST00000483508 WRNQ14191 1432 aaPredicted RBP eCLIP13.25□□□□□ -0.29
SORT1-205ENST00000483508 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
SORT1-205ENST00000483508 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
SORT1-205ENST00000483508 TOP2BQ02880 1626 aa13.17□□□□□ -0.3
SORT1-205ENST00000483508 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
SORT1-205ENST00000483508 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
SORT1-205ENST00000483508 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
SORT1-205ENST00000483508 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
SORT1-205ENST00000483508 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
SORT1-205ENST00000483508 NUP160Q12769 1436 aa13.11□□□□□ -0.31
SORT1-205ENST00000483508 ERCC6L2Q5T890 1561 aa13.1□□□□□ -0.31
SORT1-205ENST00000483508 HRCP23327 699 aa13.09□□□□□ -0.31
SORT1-205ENST00000483508 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
SORT1-205ENST00000483508 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms