RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 NISCHQ9Y2I1 1504 aa45.38■■■■■ 4.86
RPA2-201ENST00000313433 CCDC180Q9P1Z9 1646 aa40.51■■■■■ 4.08
RPA2-201ENST00000313433 ABCC9O60706 1549 aa39.82■■■■□ 3.97
RPA2-201ENST00000313433 RB1CC1Q8TDY2 1594 aa38.16■■■■□ 3.7
RPA2-201ENST00000313433 NACADO15069 1562 aa38.06■■■■□ 3.68
RPA2-201ENST00000313433 ZCCHC6Q5VYS8 1495 aaKnown RBP37.79■■■■□ 3.64
RPA2-201ENST00000313433 DCAF8L2P0C7V8 631 aa37.78■■■■□ 3.64
RPA2-201ENST00000313433 MYO15BQ96JP2 1530 aa37.76■■■■□ 3.63
RPA2-201ENST00000313433 UNC13AQ9UPW8 1703 aa37.53■■■■□ 3.6
RPA2-201ENST00000313433 DCAF1Q9Y4B6 1507 aa37.52■■■■□ 3.6
RPA2-201ENST00000313433 BICRAQ9NZM4 1560 aa37.19■■■■□ 3.54
RPA2-201ENST00000313433 PABPN1Q86U42 306 aaKnown RBP eCLIP37.11■■■■□ 3.53
RPA2-201ENST00000313433 SCRIBQ14160 1630 aa36.94■■■■□ 3.5
RPA2-201ENST00000313433 DNAJC5BQ9UF47 199 aa36.85■■■■□ 3.49
RPA2-201ENST00000313433 SHROOM4Q9ULL8 1493 aa36.58■■■■□ 3.45
RPA2-201ENST00000313433 EIF4G1Q04637 1599 aaKnown RBP36.14■■■■□ 3.38
RPA2-201ENST00000313433 CC2D2AQ9P2K1 1620 aa36.07■■■■□ 3.36
RPA2-201ENST00000313433 CECR2Q9BXF3 1484 aa35.78■■■■□ 3.32
RPA2-201ENST00000313433 SMARCA4P51532 1647 aa35.32■■■■□ 3.24
RPA2-201ENST00000313433 BAZ1AQ9NRL2 1556 aaPredicted RBP35.15■■■■□ 3.22
RPA2-201ENST00000313433 ATAD2BQ9ULI0 1458 aa35.14■■■■□ 3.22
RPA2-201ENST00000313433 NCAPD3P42695 1498 aa35.12■■■■□ 3.21
RPA2-201ENST00000313433 SMARCA2P51531 1590 aa35.03■■■■□ 3.2
RPA2-201ENST00000313433 MROH2BQ7Z745 1585 aa35.02■■■■□ 3.2
RPA2-201ENST00000313433 HMGXB3Q12766 1538 aa34.97■■■■□ 3.19
RPA2-201ENST00000313433 PEG3Q9GZU2 1588 aa34.97■■■■□ 3.19
RPA2-201ENST00000313433 BAZ1BQ9UIG0 1483 aaKnown RBP34.78■■■■□ 3.16
RPA2-201ENST00000313433 WIZO95785 1651 aa34.66■■■■□ 3.14
RPA2-201ENST00000313433 RSF1Q96T23 1441 aaPredicted RBP34.47■■■■□ 3.11
RPA2-201ENST00000313433 NESP48681 1621 aa34.45■■■■□ 3.11
RPA2-201ENST00000313433 LAMC3Q9Y6N6 1575 aa34.25■■■■□ 3.07
RPA2-201ENST00000313433 ERCC6Q03468 1493 aa34.24■■■■□ 3.07
RPA2-201ENST00000313433 TOP2AP11388 1531 aaKnown RBP34.21■■■■□ 3.07
RPA2-201ENST00000313433 KIF21AQ7Z4S6 1674 aa34.09■■■■□ 3.05
RPA2-201ENST00000313433 THOC2Q8NI27 1593 aaKnown RBP34.04■■■■□ 3.04
RPA2-201ENST00000313433 CADPSQ9ULU8 1353 aa34.04■■■■□ 3.04
RPA2-201ENST00000313433 CUX2O14529 1486 aa34.02■■■■□ 3.04
RPA2-201ENST00000313433 PDS5BQ9NTI5 1447 aa33.92■■■■□ 3.02
RPA2-201ENST00000313433 CFTRP13569 1480 aa33.84■■■■□ 3.01
RPA2-201ENST00000313433 CCDC88BA6NC98 1476 aa33.8■■■■□ 3
RPA2-201ENST00000313433 PRDM2Q13029 1718 aa33.7■■■□□ 2.98
RPA2-201ENST00000313433 FANCD2Q9BXW9 1451 aa33.69■■■□□ 2.98
RPA2-201ENST00000313433 MRC2Q9UBG0 1479 aa33.69■■■□□ 2.98
RPA2-201ENST00000313433 CEP164Q9UPV0 1460 aa33.66■■■□□ 2.98
RPA2-201ENST00000313433 WDR62O43379 1518 aa33.65■■■□□ 2.98
RPA2-201ENST00000313433 URB2Q14146 1524 aaKnown RBP33.46■■■□□ 2.95
RPA2-201ENST00000313433 SUPT5HO00267 1087 aaKnown RBP33.25■■■□□ 2.91
RPA2-201ENST00000313433 DNAJC5Q9H3Z4 198 aa33.24■■■□□ 2.91
RPA2-201ENST00000313433 TOPBP1Q92547 1522 aa33.17■■■□□ 2.9
RPA2-201ENST00000313433 DNMBPQ6XZF7 1577 aa33.1■■■□□ 2.89
RPA2-201ENST00000313433 ABCC8Q09428 1581 aa33.01■■■□□ 2.88
RPA2-201ENST00000313433 IFT140Q96RY7 1462 aa32.94■■■□□ 2.86
RPA2-201ENST00000313433 ZNF608Q9ULD9 1512 aaPredicted RBP32.93■■■□□ 2.86
RPA2-201ENST00000313433 TARBP1Q13395 1621 aaKnown RBP32.9■■■□□ 2.86
RPA2-201ENST00000313433 CUX1P39880 1505 aa32.87■■■□□ 2.85
RPA2-201ENST00000313433 POLA1P09884 1462 aaPredicted RBP32.87■■■□□ 2.85
RPA2-201ENST00000313433 EIF4G3O43432 1585 aaKnown RBP32.81■■■□□ 2.84
RPA2-201ENST00000313433 FGD5Q6ZNL6 1462 aa32.74■■■□□ 2.83
RPA2-201ENST00000313433 RAD54L2Q9Y4B4 1467 aa32.74■■■□□ 2.83
RPA2-201ENST00000313433 AQRO60306 1485 aaKnown RBP eCLIP32.65■■■□□ 2.829e-6■■□□□ 13.1
RPA2-201ENST00000313433 SOGA1O94964 1423 aa32.64■■■□□ 2.82
RPA2-201ENST00000313433 WDR97A6NE52 1622 aa32.63■■■□□ 2.81
RPA2-201ENST00000313433 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
RPA2-201ENST00000313433 SYNJ1O43426 1573 aa32.53■■■□□ 2.8
RPA2-201ENST00000313433 TDRD9Q8NDG6 1382 aaKnown RBP32.52■■■□□ 2.8
RPA2-201ENST00000313433 TOP2BQ02880 1626 aa32.49■■■□□ 2.79
RPA2-201ENST00000313433 CHD1O14646 1710 aa32.48■■■□□ 2.79
RPA2-201ENST00000313433 WRNQ14191 1432 aaPredicted RBP eCLIP32.44■■■□□ 2.78
RPA2-201ENST00000313433 OSCARQ8IYS5 282 aa32.44■■■□□ 2.78
RPA2-201ENST00000313433 ABCA10Q8WWZ4 1543 aa32.4■■■□□ 2.78
RPA2-201ENST00000313433 ABCA5Q8WWZ7 1642 aa32.39■■■□□ 2.78
RPA2-201ENST00000313433 PBRM1Q86U86 1689 aa32.38■■■□□ 2.77
RPA2-201ENST00000313433 SNAPC4Q5SXM2 1469 aa32.36■■■□□ 2.77
RPA2-201ENST00000313433 GRIN2BQ13224 1484 aa32.3■■■□□ 2.76
RPA2-201ENST00000313433 GAPVD1Q14C86 1478 aa32.29■■■□□ 2.76
RPA2-201ENST00000313433 MAGI1Q96QZ7 1491 aaPredicted RBP32.26■■■□□ 2.75
RPA2-201ENST00000313433 RIMBP3CA6NJZ7 1639 aa32.19■■■□□ 2.74
RPA2-201ENST00000313433 RIMBP3BA6NNM3 1639 aa32.19■■■□□ 2.74
RPA2-201ENST00000313433 RIMBP3Q9UFD9 1639 aa32.19■■■□□ 2.74
RPA2-201ENST00000313433 SYNJ2O15056 1496 aa32.15■■■□□ 2.74
RPA2-201ENST00000313433 FBLN2P98095 1184 aa32.14■■■□□ 2.74
RPA2-201ENST00000313433 ARHGEF11O15085 1522 aa32.1■■■□□ 2.73
RPA2-201ENST00000313433 CLASP1Q7Z460 1538 aa32.1■■■□□ 2.73
RPA2-201ENST00000313433 ADAMTS12P58397 1594 aa32.08■■■□□ 2.73
RPA2-201ENST00000313433 CHMP7Q8WUX9 453 aaPredicted RBP32.01■■■□□ 2.71
RPA2-201ENST00000313433 TRIM41Q8WV44 630 aa32■■■□□ 2.71
RPA2-201ENST00000313433 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
RPA2-201ENST00000313433 GRIN2AQ12879 1464 aa31.94■■■□□ 2.7
RPA2-201ENST00000313433 FHAD1B1AJZ9 1412 aa31.88■■■□□ 2.69
RPA2-201ENST00000313433 CEP170Q5SW79 1584 aa31.88■■■□□ 2.69
RPA2-201ENST00000313433 ARAP1Q96P48 1450 aa31.86■■■□□ 2.69
RPA2-201ENST00000313433 NUP160Q12769 1436 aa31.83■■■□□ 2.69
RPA2-201ENST00000313433 KIF27Q86VH2 1401 aa31.74■■■□□ 2.67
RPA2-201ENST00000313433 IGF1RP08069 1367 aa31.7■■■□□ 2.67
RPA2-201ENST00000313433 SHROOM2Q13796 1616 aa31.69■■■□□ 2.66
RPA2-201ENST00000313433 ERCC6L2Q5T890 1561 aa31.68■■■□□ 2.66
RPA2-201ENST00000313433 CYB5RLQ6IPT4 315 aa31.68■■■□□ 2.66
RPA2-201ENST00000313433 CUL7Q14999 1698 aa31.67■■■□□ 2.66
RPA2-201ENST00000313433 RUSC2Q8N2Y8 1516 aa31.62■■■□□ 2.65
RPA2-201ENST00000313433 CARMIL1Q5VZK9 1371 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms