RNA–Protein interactions for RNA: ENST00000262120.9

TWSG1-201, Transcript of twisted gastrulation BMP signaling modulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWSG1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWSG1-201ENST00000262120 NISCHQ9Y2I1 1504 aa25.09■■□□□ 1.61
TWSG1-201ENST00000262120 DCAF8L2P0C7V8 631 aa23.73■■□□□ 1.39
TWSG1-201ENST00000262120 SHROOM4Q9ULL8 1493 aa23.63■■□□□ 1.37
TWSG1-201ENST00000262120 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
TWSG1-201ENST00000262120 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.22
TWSG1-201ENST00000262120 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
TWSG1-201ENST00000262120 PCGF6Q9BYE7 350 aa22.27■■□□□ 1.16
TWSG1-201ENST00000262120 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.12
TWSG1-201ENST00000262120 LOC105371045A0A1W2PR82 267 aa21.92■■□□□ 1.1
TWSG1-201ENST00000262120 PPARGC1BQ86YN6 1023 aaKnown RBP21.86■■□□□ 1.09
TWSG1-201ENST00000262120 TTBK1Q5TCY1 1321 aaPredicted RBP21.79■■□□□ 1.08
TWSG1-201ENST00000262120 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
TWSG1-201ENST00000262120 HRCP23327 699 aa21.6■■□□□ 1.05
TWSG1-201ENST00000262120 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
TWSG1-201ENST00000262120 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
TWSG1-201ENST00000262120 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
TWSG1-201ENST00000262120 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.97
TWSG1-201ENST00000262120 ZCCHC6Q5VYS8 1495 aaKnown RBP21.07■□□□□ 0.96
TWSG1-201ENST00000262120 PELP1Q8IZL8 1130 aaKnown RBP21.03■□□□□ 0.96
TWSG1-201ENST00000262120 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
TWSG1-201ENST00000262120 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
TWSG1-201ENST00000262120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
TWSG1-201ENST00000262120 YTHDC1Q96MU7 727 aaKnown RBP20.85■□□□□ 0.93
TWSG1-201ENST00000262120 ABCC9O60706 1549 aa20.81■□□□□ 0.92
TWSG1-201ENST00000262120 NACADO15069 1562 aa20.8■□□□□ 0.92
TWSG1-201ENST00000262120 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
TWSG1-201ENST00000262120 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
TWSG1-201ENST00000262120 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
TWSG1-201ENST00000262120 CENPBP07199 599 aaPredicted RBP20.56■□□□□ 0.88
TWSG1-201ENST00000262120 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
TWSG1-201ENST00000262120 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.88
TWSG1-201ENST00000262120 HNRNPUL2Q1KMD3 747 aaKnown RBP20.51■□□□□ 0.87
TWSG1-201ENST00000262120 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
TWSG1-201ENST00000262120 SCRIBQ14160 1630 aa20.4■□□□□ 0.86
TWSG1-201ENST00000262120 APLP2Q06481 763 aa20.39■□□□□ 0.85
TWSG1-201ENST00000262120 ITGAEP38570 1179 aa20.32■□□□□ 0.84
TWSG1-201ENST00000262120 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
TWSG1-201ENST00000262120 NEUROD1Q13562 356 aa20.23■□□□□ 0.83
TWSG1-201ENST00000262120 DIEXFQ68CQ4 756 aaKnown RBP20.21■□□□□ 0.83
TWSG1-201ENST00000262120 UNC13AQ9UPW8 1703 aa20.2■□□□□ 0.82
TWSG1-201ENST00000262120 MYT1Q01538 1121 aa20.19■□□□□ 0.82
TWSG1-201ENST00000262120 ACIN1Q9UKV3 1341 aaKnown RBP20.17■□□□□ 0.82
TWSG1-201ENST00000262120 RSF1Q96T23 1441 aaPredicted RBP20.17■□□□□ 0.82
TWSG1-201ENST00000262120 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
TWSG1-201ENST00000262120 BICRAQ9NZM4 1560 aa19.97■□□□□ 0.79
TWSG1-201ENST00000262120 CSRNP3Q8WYN3 585 aa19.89■□□□□ 0.77
TWSG1-201ENST00000262120 BCANQ96GW7 911 aa19.84■□□□□ 0.77
TWSG1-201ENST00000262120 CNGB1Q14028 1251 aaPredicted RBP19.8■□□□□ 0.76
TWSG1-201ENST00000262120 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
TWSG1-201ENST00000262120 ZNF316A6NFI3 1004 aaPredicted RBP19.71■□□□□ 0.75
TWSG1-201ENST00000262120 MIER1Q8N108 512 aa19.69■□□□□ 0.74
TWSG1-201ENST00000262120 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
TWSG1-201ENST00000262120 ERICH6Q7L0X2 663 aa19.67■□□□□ 0.74
TWSG1-201ENST00000262120 SOGA1O94964 1423 aa19.66■□□□□ 0.74
TWSG1-201ENST00000262120 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
TWSG1-201ENST00000262120 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
TWSG1-201ENST00000262120 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
TWSG1-201ENST00000262120 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
TWSG1-201ENST00000262120 CCDC88BA6NC98 1476 aa19.55■□□□□ 0.72
TWSG1-201ENST00000262120 ARID3CA6NKF2 412 aa19.54■□□□□ 0.72
TWSG1-201ENST00000262120 WIZO95785 1651 aa19.51■□□□□ 0.71
TWSG1-201ENST00000262120 RUSC2Q8N2Y8 1516 aa19.48■□□□□ 0.71
TWSG1-201ENST00000262120 NEFLP07196 543 aa19.45■□□□□ 0.7
TWSG1-201ENST00000262120 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
TWSG1-201ENST00000262120 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
TWSG1-201ENST00000262120 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
TWSG1-201ENST00000262120 POLR3GLQ9BT43 218 aa19.4■□□□□ 0.7
TWSG1-201ENST00000262120 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.69
TWSG1-201ENST00000262120 DDX10Q13206 875 aaKnown RBP19.31■□□□□ 0.68
TWSG1-201ENST00000262120 CLIP1P30622 1438 aa19.31■□□□□ 0.68
TWSG1-201ENST00000262120 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
TWSG1-201ENST00000262120 KANK4Q5T7N3 995 aaPredicted RBP19.27■□□□□ 0.68
TWSG1-201ENST00000262120 TRIM52Q96A61 297 aa19.24■□□□□ 0.67
TWSG1-201ENST00000262120 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
TWSG1-201ENST00000262120 TNIKQ9UKE5 1360 aa19.2■□□□□ 0.66
TWSG1-201ENST00000262120 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
TWSG1-201ENST00000262120 BCL11AQ9H165 835 aa19.19■□□□□ 0.66
TWSG1-201ENST00000262120 SIN3AQ96ST3 1273 aa19.19■□□□□ 0.66
TWSG1-201ENST00000262120 FKBP8Q14318 412 aa19.18■□□□□ 0.66
TWSG1-201ENST00000262120 KCNH8Q96L42 1107 aa19.17■□□□□ 0.66
TWSG1-201ENST00000262120 HMGXB3Q12766 1538 aa19.16■□□□□ 0.66
TWSG1-201ENST00000262120 IRX6P78412 446 aaPredicted RBP19.12■□□□□ 0.65
TWSG1-201ENST00000262120 CHIC2Q9UKJ5 165 aa19.12■□□□□ 0.65
TWSG1-201ENST00000262120 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
TWSG1-201ENST00000262120 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
TWSG1-201ENST00000262120 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
TWSG1-201ENST00000262120 ZNF326Q5BKZ1 582 aaKnown RBP19.08■□□□□ 0.65
TWSG1-201ENST00000262120 ATAD2BQ9ULI0 1458 aa19.08■□□□□ 0.65
TWSG1-201ENST00000262120 ANP32EQ9BTT0 268 aa19.07■□□□□ 0.64
TWSG1-201ENST00000262120 TOP2AP11388 1531 aaKnown RBP19.04■□□□□ 0.64
TWSG1-201ENST00000262120 SUPT16HQ9Y5B9 1047 aaKnown RBP19.02■□□□□ 0.63
TWSG1-201ENST00000262120 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
TWSG1-201ENST00000262120 ANP32CO43423 234 aa18.93■□□□□ 0.62
TWSG1-201ENST00000262120 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
TWSG1-201ENST00000262120 FBLN2P98095 1184 aa18.92■□□□□ 0.62
TWSG1-201ENST00000262120 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
TWSG1-201ENST00000262120 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
TWSG1-201ENST00000262120 NBR1Q14596 966 aa18.89■□□□□ 0.61
TWSG1-201ENST00000262120 TSHZ2Q9NRE2 1034 aa18.87■□□□□ 0.61
TWSG1-201ENST00000262120 HNRNPUQ00839 825 aaKnown RBP eCLIP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms