RNA–Protein interactions for RNA: ENST00000373912.7

RPA2-203, Transcript of replication protein A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA2, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-203ENST00000373912 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
RPA2-203ENST00000373912 CCDC180Q9P1Z9 1646 aa25.5■■□□□ 1.67
RPA2-203ENST00000373912 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
RPA2-203ENST00000373912 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
RPA2-203ENST00000373912 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
RPA2-203ENST00000373912 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
RPA2-203ENST00000373912 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
RPA2-203ENST00000373912 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
RPA2-203ENST00000373912 ABCC9O60706 1549 aa23.61■■□□□ 1.37
RPA2-203ENST00000373912 NACADO15069 1562 aa23.54■■□□□ 1.36
RPA2-203ENST00000373912 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
RPA2-203ENST00000373912 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
RPA2-203ENST00000373912 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
RPA2-203ENST00000373912 RSF1Q96T23 1441 aaPredicted RBP23.18■■□□□ 1.3
RPA2-203ENST00000373912 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.25
RPA2-203ENST00000373912 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
RPA2-203ENST00000373912 UNC13AQ9UPW8 1703 aa22.8■■□□□ 1.24
RPA2-203ENST00000373912 BAZ1AQ9NRL2 1556 aaPredicted RBP22.77■■□□□ 1.24
RPA2-203ENST00000373912 WIZO95785 1651 aa22.72■■□□□ 1.23
RPA2-203ENST00000373912 SMARCA4P51532 1647 aa22.59■■□□□ 1.21
RPA2-203ENST00000373912 TOP2AP11388 1531 aaKnown RBP22.51■■□□□ 1.19
RPA2-203ENST00000373912 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
RPA2-203ENST00000373912 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
RPA2-203ENST00000373912 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
RPA2-203ENST00000373912 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
RPA2-203ENST00000373912 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
RPA2-203ENST00000373912 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
RPA2-203ENST00000373912 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
RPA2-203ENST00000373912 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
RPA2-203ENST00000373912 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
RPA2-203ENST00000373912 HRCP23327 699 aa22.08■■□□□ 1.13
RPA2-203ENST00000373912 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
RPA2-203ENST00000373912 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
RPA2-203ENST00000373912 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
RPA2-203ENST00000373912 TRIM26Q12899 539 aaPredicted RBP21.95■■□□□ 1.1
RPA2-203ENST00000373912 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
RPA2-203ENST00000373912 EEA1Q15075 1411 aa21.86■■□□□ 1.09
RPA2-203ENST00000373912 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
RPA2-203ENST00000373912 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
RPA2-203ENST00000373912 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
RPA2-203ENST00000373912 SOGA1O94964 1423 aa21.73■■□□□ 1.07
RPA2-203ENST00000373912 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
RPA2-203ENST00000373912 NCAPD3P42695 1498 aa21.7■■□□□ 1.06
RPA2-203ENST00000373912 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
RPA2-203ENST00000373912 TNIKQ9UKE5 1360 aa21.64■■□□□ 1.05
RPA2-203ENST00000373912 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
RPA2-203ENST00000373912 CSRNP3Q8WYN3 585 aa21.6■■□□□ 1.05
RPA2-203ENST00000373912 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
RPA2-203ENST00000373912 KIF21BO75037 1637 aa21.59■■□□□ 1.05
RPA2-203ENST00000373912 CEP162Q5TB80 1403 aa21.58■■□□□ 1.04
RPA2-203ENST00000373912 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
RPA2-203ENST00000373912 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
RPA2-203ENST00000373912 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
RPA2-203ENST00000373912 ZEB1P37275 1124 aaPredicted RBP21.46■■□□□ 1.03
RPA2-203ENST00000373912 PRDM2Q13029 1718 aa21.45■■□□□ 1.03
RPA2-203ENST00000373912 CFTRP13569 1480 aa21.42■■□□□ 1.02
RPA2-203ENST00000373912 PPARGC1BQ86YN6 1023 aaKnown RBP21.41■■□□□ 1.02
RPA2-203ENST00000373912 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
RPA2-203ENST00000373912 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
RPA2-203ENST00000373912 CUX1P39880 1505 aa21.34■■□□□ 1.01
RPA2-203ENST00000373912 ERICH3Q5RHP9 1530 aa21.3■■□□□ 1
RPA2-203ENST00000373912 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
RPA2-203ENST00000373912 CLIP1P30622 1438 aa21.24■□□□□ 0.99
RPA2-203ENST00000373912 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
RPA2-203ENST00000373912 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
RPA2-203ENST00000373912 CADPSQ9ULU8 1353 aa21.17■□□□□ 0.98
RPA2-203ENST00000373912 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
RPA2-203ENST00000373912 ARAP1Q96P48 1450 aa20.99■□□□□ 0.95
RPA2-203ENST00000373912 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
RPA2-203ENST00000373912 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
RPA2-203ENST00000373912 CUX2O14529 1486 aa20.96■□□□□ 0.95
RPA2-203ENST00000373912 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
RPA2-203ENST00000373912 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
RPA2-203ENST00000373912 TTBK1Q5TCY1 1321 aaPredicted RBP20.94■□□□□ 0.94
RPA2-203ENST00000373912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.94■□□□□ 0.94
RPA2-203ENST00000373912 APLP2Q06481 763 aa20.89■□□□□ 0.93
RPA2-203ENST00000373912 IGF1RP08069 1367 aa20.89■□□□□ 0.93
RPA2-203ENST00000373912 LAMC3Q9Y6N6 1575 aa20.88■□□□□ 0.93
RPA2-203ENST00000373912 ARHGAP35Q9NRY4 1499 aa20.84■□□□□ 0.93
RPA2-203ENST00000373912 TOPBP1Q92547 1522 aa20.83■□□□□ 0.93
RPA2-203ENST00000373912 ABCA10Q8WWZ4 1543 aa20.82■□□□□ 0.92
RPA2-203ENST00000373912 CARMIL1Q5VZK9 1371 aa20.79■□□□□ 0.92
RPA2-203ENST00000373912 NESP48681 1621 aa20.79■□□□□ 0.92
RPA2-203ENST00000373912 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
RPA2-203ENST00000373912 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
RPA2-203ENST00000373912 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
RPA2-203ENST00000373912 CUL7Q14999 1698 aa20.75■□□□□ 0.91
RPA2-203ENST00000373912 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
RPA2-203ENST00000373912 RAD54L2Q9Y4B4 1467 aa20.7■□□□□ 0.9
RPA2-203ENST00000373912 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
RPA2-203ENST00000373912 RRBP1Q9P2E9 1410 aaKnown RBP20.67■□□□□ 0.9
RPA2-203ENST00000373912 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
RPA2-203ENST00000373912 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.9
RPA2-203ENST00000373912 TIAM1Q13009 1591 aa20.64■□□□□ 0.9
RPA2-203ENST00000373912 CTTNBP2Q8WZ74 1663 aa20.64■□□□□ 0.89
RPA2-203ENST00000373912 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
RPA2-203ENST00000373912 EFCAB5A4FU69 1503 aa20.63■□□□□ 0.89
RPA2-203ENST00000373912 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
RPA2-203ENST00000373912 CFAP43Q8NDM7 1665 aa20.61■□□□□ 0.89
RPA2-203ENST00000373912 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms