RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 NISCHQ9Y2I1 1504 aa35.03■■■■□ 3.2
COL9A2-208ENST00000488463 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.59
COL9A2-208ENST00000488463 ABCC9O60706 1549 aa30.62■■■□□ 2.49
COL9A2-208ENST00000488463 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.29
COL9A2-208ENST00000488463 NACADO15069 1562 aa29.35■■■□□ 2.29
COL9A2-208ENST00000488463 MYO15BQ96JP2 1530 aa29.18■■■□□ 2.26
COL9A2-208ENST00000488463 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
COL9A2-208ENST00000488463 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
COL9A2-208ENST00000488463 DCAF1Q9Y4B6 1507 aa29■■■□□ 2.23
COL9A2-208ENST00000488463 UNC13AQ9UPW8 1703 aa28.82■■■□□ 2.2
COL9A2-208ENST00000488463 DNAJC5BQ9UF47 199 aa28.72■■■□□ 2.19
COL9A2-208ENST00000488463 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
COL9A2-208ENST00000488463 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.163e-7■■■□□ 16.2
COL9A2-208ENST00000488463 SCRIBQ14160 1630 aa28.42■■■□□ 2.14
COL9A2-208ENST00000488463 SHROOM4Q9ULL8 1493 aa28.22■■■□□ 2.11
COL9A2-208ENST00000488463 EIF4G1Q04637 1599 aaKnown RBP27.81■■■□□ 2.04
COL9A2-208ENST00000488463 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
COL9A2-208ENST00000488463 CECR2Q9BXF3 1484 aa27.52■■■□□ 2
COL9A2-208ENST00000488463 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
COL9A2-208ENST00000488463 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
COL9A2-208ENST00000488463 NCAPD3P42695 1498 aa27.11■■□□□ 1.93
COL9A2-208ENST00000488463 ATAD2BQ9ULI0 1458 aa27.1■■□□□ 1.93
COL9A2-208ENST00000488463 SMARCA2P51531 1590 aa27.02■■□□□ 1.92
COL9A2-208ENST00000488463 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
COL9A2-208ENST00000488463 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
COL9A2-208ENST00000488463 HMGXB3Q12766 1538 aa26.95■■□□□ 1.91
COL9A2-208ENST00000488463 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
COL9A2-208ENST00000488463 WIZO95785 1651 aa26.7■■□□□ 1.87
COL9A2-208ENST00000488463 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
COL9A2-208ENST00000488463 NESP48681 1621 aa26.5■■□□□ 1.83
COL9A2-208ENST00000488463 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.82
COL9A2-208ENST00000488463 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
COL9A2-208ENST00000488463 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
COL9A2-208ENST00000488463 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
COL9A2-208ENST00000488463 CADPSQ9ULU8 1353 aa26.27■■□□□ 1.8
COL9A2-208ENST00000488463 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
COL9A2-208ENST00000488463 CUX2O14529 1486 aa26.17■■□□□ 1.78
COL9A2-208ENST00000488463 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
COL9A2-208ENST00000488463 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
COL9A2-208ENST00000488463 CFTRP13569 1480 aa26.12■■□□□ 1.77
COL9A2-208ENST00000488463 CCDC88BA6NC98 1476 aa26.1■■□□□ 1.77
COL9A2-208ENST00000488463 FANCD2Q9BXW9 1451 aa25.97■■□□□ 1.75
COL9A2-208ENST00000488463 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
COL9A2-208ENST00000488463 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
COL9A2-208ENST00000488463 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
COL9A2-208ENST00000488463 WDR62O43379 1518 aa25.9■■□□□ 1.74
COL9A2-208ENST00000488463 URB2Q14146 1524 aaKnown RBP25.76■■□□□ 1.71
COL9A2-208ENST00000488463 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
COL9A2-208ENST00000488463 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
COL9A2-208ENST00000488463 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
COL9A2-208ENST00000488463 ABCC8Q09428 1581 aa25.49■■□□□ 1.67
COL9A2-208ENST00000488463 IFT140Q96RY7 1462 aa25.4■■□□□ 1.66
COL9A2-208ENST00000488463 ZNF608Q9ULD9 1512 aaPredicted RBP25.35■■□□□ 1.65
COL9A2-208ENST00000488463 POLA1P09884 1462 aaPredicted RBP25.34■■□□□ 1.65
COL9A2-208ENST00000488463 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
COL9A2-208ENST00000488463 CUX1P39880 1505 aa25.34■■□□□ 1.65
COL9A2-208ENST00000488463 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
COL9A2-208ENST00000488463 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
COL9A2-208ENST00000488463 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
COL9A2-208ENST00000488463 SOGA1O94964 1423 aa25.19■■□□□ 1.62
COL9A2-208ENST00000488463 AQRO60306 1485 aaKnown RBP eCLIP25.16■■□□□ 1.62
COL9A2-208ENST00000488463 WDR97A6NE52 1622 aa25.11■■□□□ 1.61
COL9A2-208ENST00000488463 BIVM-ERCC5R4GMW8 1640 aa25.09■■□□□ 1.61
COL9A2-208ENST00000488463 SYNJ1O43426 1573 aa25.08■■□□□ 1.61
COL9A2-208ENST00000488463 TOP2BQ02880 1626 aa25.08■■□□□ 1.6
COL9A2-208ENST00000488463 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
COL9A2-208ENST00000488463 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
COL9A2-208ENST00000488463 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
COL9A2-208ENST00000488463 OSCARQ8IYS5 282 aa25.01■■□□□ 1.59
COL9A2-208ENST00000488463 ABCA10Q8WWZ4 1543 aa25.01■■□□□ 1.59
COL9A2-208ENST00000488463 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
COL9A2-208ENST00000488463 CHD1O14646 1710 aa24.93■■□□□ 1.58
COL9A2-208ENST00000488463 GRIN2BQ13224 1484 aa24.91■■□□□ 1.58
COL9A2-208ENST00000488463 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
COL9A2-208ENST00000488463 SNAPC4Q5SXM2 1469 aa24.9■■□□□ 1.58
COL9A2-208ENST00000488463 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
COL9A2-208ENST00000488463 MAGI1Q96QZ7 1491 aaPredicted RBP24.87■■□□□ 1.57
COL9A2-208ENST00000488463 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
COL9A2-208ENST00000488463 FBLN2P98095 1184 aa24.76■■□□□ 1.55
COL9A2-208ENST00000488463 CHMP7Q8WUX9 453 aaPredicted RBP24.7■■□□□ 1.54
COL9A2-208ENST00000488463 RIMBP3CA6NJZ7 1639 aa24.7■■□□□ 1.54
COL9A2-208ENST00000488463 RIMBP3BA6NNM3 1639 aa24.7■■□□□ 1.54
COL9A2-208ENST00000488463 RIMBP3Q9UFD9 1639 aa24.7■■□□□ 1.54
COL9A2-208ENST00000488463 CLASP1Q7Z460 1538 aa24.7■■□□□ 1.54
COL9A2-208ENST00000488463 ADAMTS12P58397 1594 aa24.69■■□□□ 1.54
COL9A2-208ENST00000488463 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
COL9A2-208ENST00000488463 ARHGEF11O15085 1522 aa24.67■■□□□ 1.54
COL9A2-208ENST00000488463 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
COL9A2-208ENST00000488463 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
COL9A2-208ENST00000488463 NUP160Q12769 1436 aa24.54■■□□□ 1.52
COL9A2-208ENST00000488463 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
COL9A2-208ENST00000488463 CEP170Q5SW79 1584 aa24.53■■□□□ 1.52
COL9A2-208ENST00000488463 IGF1RP08069 1367 aa24.52■■□□□ 1.52
COL9A2-208ENST00000488463 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
COL9A2-208ENST00000488463 CYB5RLQ6IPT4 315 aa24.44■■□□□ 1.5
COL9A2-208ENST00000488463 CUL7Q14999 1698 aa24.42■■□□□ 1.5
COL9A2-208ENST00000488463 SHROOM2Q13796 1616 aa24.39■■□□□ 1.5
COL9A2-208ENST00000488463 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
COL9A2-208ENST00000488463 ERCC6L2Q5T890 1561 aa24.36■■□□□ 1.49
COL9A2-208ENST00000488463 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms