RNA–Protein interactions for RNA: ENST00000444045.1

RPA2-205, Transcript of replication protein A2, humanhuman

TSL 5

Gene RPA2, Length 682 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-205ENST00000444045 NISCHQ9Y2I1 1504 aa34.46■■■■□ 3.11
RPA2-205ENST00000444045 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
RPA2-205ENST00000444045 ABCC9O60706 1549 aa29.09■■■□□ 2.25
RPA2-205ENST00000444045 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
RPA2-205ENST00000444045 DCAF1Q9Y4B6 1507 aa28.62■■■□□ 2.17
RPA2-205ENST00000444045 MYO15BQ96JP2 1530 aa28.45■■■□□ 2.15
RPA2-205ENST00000444045 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
RPA2-205ENST00000444045 NACADO15069 1562 aa28.28■■■□□ 2.12
RPA2-205ENST00000444045 RB1CC1Q8TDY2 1594 aa28.09■■■□□ 2.09
RPA2-205ENST00000444045 DNAJC5BQ9UF47 199 aa27.92■■■□□ 2.06
RPA2-205ENST00000444045 SCRIBQ14160 1630 aa27.62■■■□□ 2.01
RPA2-205ENST00000444045 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
RPA2-205ENST00000444045 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
RPA2-205ENST00000444045 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
RPA2-205ENST00000444045 PABPN1Q86U42 306 aaKnown RBP eCLIP27.01■■□□□ 1.91
RPA2-205ENST00000444045 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
RPA2-205ENST00000444045 BAZ1AQ9NRL2 1556 aaPredicted RBP26.66■■□□□ 1.86
RPA2-205ENST00000444045 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
RPA2-205ENST00000444045 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
RPA2-205ENST00000444045 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
RPA2-205ENST00000444045 EIF4G1Q04637 1599 aaKnown RBP26.42■■□□□ 1.82
RPA2-205ENST00000444045 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
RPA2-205ENST00000444045 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
RPA2-205ENST00000444045 WIZO95785 1651 aa26.28■■□□□ 1.8
RPA2-205ENST00000444045 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
RPA2-205ENST00000444045 DNAJC5Q9H3Z4 198 aa26.23■■□□□ 1.79
RPA2-205ENST00000444045 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
RPA2-205ENST00000444045 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
RPA2-205ENST00000444045 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
RPA2-205ENST00000444045 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
RPA2-205ENST00000444045 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
RPA2-205ENST00000444045 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
RPA2-205ENST00000444045 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
RPA2-205ENST00000444045 CUX2O14529 1486 aa25.44■■□□□ 1.66
RPA2-205ENST00000444045 CFTRP13569 1480 aa25.4■■□□□ 1.66
RPA2-205ENST00000444045 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
RPA2-205ENST00000444045 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
RPA2-205ENST00000444045 PRDM2Q13029 1718 aa25.25■■□□□ 1.63
RPA2-205ENST00000444045 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
RPA2-205ENST00000444045 ERCC6Q03468 1493 aa25.19■■□□□ 1.62
RPA2-205ENST00000444045 NESP48681 1621 aa25.14■■□□□ 1.61
RPA2-205ENST00000444045 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
RPA2-205ENST00000444045 FANCD2Q9BXW9 1451 aa25.04■■□□□ 1.6
RPA2-205ENST00000444045 ABCC8Q09428 1581 aa25.02■■□□□ 1.6
RPA2-205ENST00000444045 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.59
RPA2-205ENST00000444045 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
RPA2-205ENST00000444045 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
RPA2-205ENST00000444045 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
RPA2-205ENST00000444045 SYNJ1O43426 1573 aa24.88■■□□□ 1.57
RPA2-205ENST00000444045 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
RPA2-205ENST00000444045 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
RPA2-205ENST00000444045 CUX1P39880 1505 aa24.86■■□□□ 1.57
RPA2-205ENST00000444045 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
RPA2-205ENST00000444045 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
RPA2-205ENST00000444045 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
RPA2-205ENST00000444045 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
RPA2-205ENST00000444045 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
RPA2-205ENST00000444045 WDR62O43379 1518 aa24.65■■□□□ 1.54
RPA2-205ENST00000444045 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
RPA2-205ENST00000444045 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
RPA2-205ENST00000444045 EEA1Q15075 1411 aa24.54■■□□□ 1.52
RPA2-205ENST00000444045 SOGA1O94964 1423 aa24.51■■□□□ 1.51
RPA2-205ENST00000444045 ABCA10Q8WWZ4 1543 aa24.48■■□□□ 1.51
RPA2-205ENST00000444045 RAD54L2Q9Y4B4 1467 aa24.44■■□□□ 1.5
RPA2-205ENST00000444045 KIF27Q86VH2 1401 aa24.43■■□□□ 1.5
RPA2-205ENST00000444045 TARBP1Q13395 1621 aaKnown RBP24.42■■□□□ 1.5
RPA2-205ENST00000444045 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
RPA2-205ENST00000444045 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
RPA2-205ENST00000444045 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
RPA2-205ENST00000444045 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
RPA2-205ENST00000444045 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.49
RPA2-205ENST00000444045 ABCA5Q8WWZ7 1642 aa24.29■■□□□ 1.48
RPA2-205ENST00000444045 IGF1RP08069 1367 aa24.24■■□□□ 1.47
RPA2-205ENST00000444045 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
RPA2-205ENST00000444045 GAPVD1Q14C86 1478 aa24.23■■□□□ 1.47
RPA2-205ENST00000444045 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.47
RPA2-205ENST00000444045 KIF21BO75037 1637 aa24.19■■□□□ 1.46
RPA2-205ENST00000444045 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
RPA2-205ENST00000444045 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
RPA2-205ENST00000444045 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.469e-6■■□□□ 13.1
RPA2-205ENST00000444045 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
RPA2-205ENST00000444045 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
RPA2-205ENST00000444045 CUL7Q14999 1698 aa24.12■■□□□ 1.45
RPA2-205ENST00000444045 OSCARQ8IYS5 282 aa24.11■■□□□ 1.45
RPA2-205ENST00000444045 PBRM1Q86U86 1689 aa24.11■■□□□ 1.45
RPA2-205ENST00000444045 LOC105371045A0A1W2PR82 267 aa24.1■■□□□ 1.45
RPA2-205ENST00000444045 CARMIL1Q5VZK9 1371 aa24.1■■□□□ 1.45
RPA2-205ENST00000444045 GOLGA3Q08378 1498 aa24.1■■□□□ 1.45
RPA2-205ENST00000444045 RAPGEF2Q9Y4G8 1499 aa24.05■■□□□ 1.44
RPA2-205ENST00000444045 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
RPA2-205ENST00000444045 MAGI1Q96QZ7 1491 aaPredicted RBP23.99■■□□□ 1.43
RPA2-205ENST00000444045 TNIKQ9UKE5 1360 aa23.98■■□□□ 1.43
RPA2-205ENST00000444045 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
RPA2-205ENST00000444045 SNAPC4Q5SXM2 1469 aa23.95■■□□□ 1.42
RPA2-205ENST00000444045 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
RPA2-205ENST00000444045 EHMT2Q96KQ7 1210 aa23.89■■□□□ 1.41
RPA2-205ENST00000444045 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
RPA2-205ENST00000444045 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
RPA2-205ENST00000444045 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
RPA2-205ENST00000444045 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms