RNA–Protein interactions for RNA: ENST00000417105.5

COL9A2-203, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-203ENST00000417105 NISCHQ9Y2I1 1504 aa54.65■■■■■ 6.34
COL9A2-203ENST00000417105 CCDC180Q9P1Z9 1646 aa48.8■■■■■ 5.4
COL9A2-203ENST00000417105 ABCC9O60706 1549 aa48.51■■■■■ 5.36
COL9A2-203ENST00000417105 RB1CC1Q8TDY2 1594 aa46.29■■■■■ 5
COL9A2-203ENST00000417105 NACADO15069 1562 aa46.06■■■■■ 4.96
COL9A2-203ENST00000417105 DCAF8L2P0C7V8 631 aa46.05■■■■■ 4.96
COL9A2-203ENST00000417105 MYO15BQ96JP2 1530 aa45.52■■■■■ 4.88
COL9A2-203ENST00000417105 ZCCHC6Q5VYS8 1495 aaKnown RBP45.37■■■■■ 4.85
COL9A2-203ENST00000417105 PABPN1Q86U42 306 aaKnown RBP eCLIP45.26■■■■■ 4.845e-7■■■□□ 16
COL9A2-203ENST00000417105 UNC13AQ9UPW8 1703 aa45.22■■■■■ 4.83
COL9A2-203ENST00000417105 DNAJC5BQ9UF47 199 aa45.15■■■■■ 4.82
COL9A2-203ENST00000417105 DCAF1Q9Y4B6 1507 aa45.11■■■■■ 4.81
COL9A2-203ENST00000417105 BICRAQ9NZM4 1560 aa44.94■■■■■ 4.78
COL9A2-203ENST00000417105 SCRIBQ14160 1630 aa44.58■■■■■ 4.73
COL9A2-203ENST00000417105 SHROOM4Q9ULL8 1493 aa44.32■■■■■ 4.69
COL9A2-203ENST00000417105 EIF4G1Q04637 1599 aaKnown RBP43.8■■■■■ 4.6
COL9A2-203ENST00000417105 CC2D2AQ9P2K1 1620 aa43.8■■■■■ 4.6
COL9A2-203ENST00000417105 CECR2Q9BXF3 1484 aa43.64■■■■■ 4.58
COL9A2-203ENST00000417105 NCAPD3P42695 1498 aa42.54■■■■■ 4.4
COL9A2-203ENST00000417105 SMARCA4P51532 1647 aa42.53■■■■■ 4.4
COL9A2-203ENST00000417105 ATAD2BQ9ULI0 1458 aa42.49■■■■■ 4.39
COL9A2-203ENST00000417105 BAZ1AQ9NRL2 1556 aaPredicted RBP42.38■■■■■ 4.37
COL9A2-203ENST00000417105 SMARCA2P51531 1590 aa42.36■■■■■ 4.37
COL9A2-203ENST00000417105 HMGXB3Q12766 1538 aa42.25■■■■■ 4.35
COL9A2-203ENST00000417105 MROH2BQ7Z745 1585 aa42.14■■■■■ 4.34
COL9A2-203ENST00000417105 BAZ1BQ9UIG0 1483 aaKnown RBP42.11■■■■■ 4.33
COL9A2-203ENST00000417105 PEG3Q9GZU2 1588 aa42.08■■■■■ 4.33
COL9A2-203ENST00000417105 ERCC6Q03468 1493 aa41.85■■■■■ 4.29
COL9A2-203ENST00000417105 NESP48681 1621 aa41.79■■■■■ 4.28
COL9A2-203ENST00000417105 WIZO95785 1651 aa41.64■■■■■ 4.26
COL9A2-203ENST00000417105 CUX2O14529 1486 aa41.58■■■■■ 4.25
COL9A2-203ENST00000417105 LAMC3Q9Y6N6 1575 aa41.5■■■■■ 4.23
COL9A2-203ENST00000417105 RSF1Q96T23 1441 aaPredicted RBP41.42■■■■■ 4.22
COL9A2-203ENST00000417105 CADPSQ9ULU8 1353 aa41.29■■■■■ 4.2
COL9A2-203ENST00000417105 PDS5BQ9NTI5 1447 aa41.27■■■■■ 4.2
COL9A2-203ENST00000417105 THOC2Q8NI27 1593 aaKnown RBP41.23■■■■■ 4.19
COL9A2-203ENST00000417105 KIF21AQ7Z4S6 1674 aa41.22■■■■■ 4.19
COL9A2-203ENST00000417105 TOP2AP11388 1531 aaKnown RBP41.13■■■■■ 4.17
COL9A2-203ENST00000417105 DNAJC5Q9H3Z4 198 aa41.12■■■■■ 4.17
COL9A2-203ENST00000417105 MRC2Q9UBG0 1479 aa40.9■■■■■ 4.14
COL9A2-203ENST00000417105 CFTRP13569 1480 aa40.89■■■■■ 4.14
COL9A2-203ENST00000417105 FANCD2Q9BXW9 1451 aa40.83■■■■■ 4.13
COL9A2-203ENST00000417105 CEP164Q9UPV0 1460 aa40.83■■■■■ 4.13
COL9A2-203ENST00000417105 WDR62O43379 1518 aa40.76■■■■■ 4.12
COL9A2-203ENST00000417105 CCDC88BA6NC98 1476 aa40.69■■■■■ 4.1
COL9A2-203ENST00000417105 URB2Q14146 1524 aaKnown RBP40.47■■■■■ 4.07
COL9A2-203ENST00000417105 PRDM2Q13029 1718 aa40.45■■■■■ 4.07
COL9A2-203ENST00000417105 TOPBP1Q92547 1522 aa40.1■■■■■ 4.01
COL9A2-203ENST00000417105 ABCC8Q09428 1581 aa40■■■■□ 3.99
COL9A2-203ENST00000417105 IFT140Q96RY7 1462 aa39.98■■■■□ 3.99
COL9A2-203ENST00000417105 SUPT5HO00267 1087 aaKnown RBP39.97■■■■□ 3.99
COL9A2-203ENST00000417105 DNMBPQ6XZF7 1577 aa39.97■■■■□ 3.99
COL9A2-203ENST00000417105 ZNF608Q9ULD9 1512 aaPredicted RBP39.91■■■■□ 3.98
COL9A2-203ENST00000417105 OSCARQ8IYS5 282 aa39.79■■■■□ 3.96
COL9A2-203ENST00000417105 POLA1P09884 1462 aaPredicted RBP39.71■■■■□ 3.95
COL9A2-203ENST00000417105 TARBP1Q13395 1621 aaKnown RBP39.69■■■■□ 3.94
COL9A2-203ENST00000417105 EIF4G3O43432 1585 aaKnown RBP39.67■■■■□ 3.94
COL9A2-203ENST00000417105 AQRO60306 1485 aaKnown RBP eCLIP39.62■■■■□ 3.93
COL9A2-203ENST00000417105 RAD54L2Q9Y4B4 1467 aa39.6■■■■□ 3.93
COL9A2-203ENST00000417105 TRIM41Q8WV44 630 aa39.57■■■■□ 3.93
COL9A2-203ENST00000417105 CUX1P39880 1505 aa39.56■■■■□ 3.92
COL9A2-203ENST00000417105 SOGA1O94964 1423 aa39.56■■■■□ 3.92
COL9A2-203ENST00000417105 FGD5Q6ZNL6 1462 aa39.53■■■■□ 3.92
COL9A2-203ENST00000417105 TDRD9Q8NDG6 1382 aaKnown RBP39.45■■■■□ 3.91
COL9A2-203ENST00000417105 FBLN2P98095 1184 aa39.31■■■■□ 3.88
COL9A2-203ENST00000417105 CHD1O14646 1710 aa39.3■■■■□ 3.88
COL9A2-203ENST00000417105 WDR97A6NE52 1622 aa39.26■■■■□ 3.88
COL9A2-203ENST00000417105 SNAPC4Q5SXM2 1469 aa39.21■■■■□ 3.87
COL9A2-203ENST00000417105 RIMBP3CA6NJZ7 1639 aa39.21■■■■□ 3.87
COL9A2-203ENST00000417105 RIMBP3BA6NNM3 1639 aa39.21■■■■□ 3.87
COL9A2-203ENST00000417105 RIMBP3Q9UFD9 1639 aa39.21■■■■□ 3.87
COL9A2-203ENST00000417105 GRIN2BQ13224 1484 aa39.14■■■■□ 3.86
COL9A2-203ENST00000417105 ARHGEF11O15085 1522 aa39.14■■■■□ 3.86
COL9A2-203ENST00000417105 ABCA10Q8WWZ4 1543 aa39.09■■■■□ 3.85
COL9A2-203ENST00000417105 MAGI1Q96QZ7 1491 aaPredicted RBP39.08■■■■□ 3.85
COL9A2-203ENST00000417105 GAPVD1Q14C86 1478 aa39.07■■■■□ 3.85
COL9A2-203ENST00000417105 WRNQ14191 1432 aaPredicted RBP eCLIP39.06■■■■□ 3.84
COL9A2-203ENST00000417105 CHMP7Q8WUX9 453 aaPredicted RBP39.05■■■■□ 3.84
COL9A2-203ENST00000417105 TOP2BQ02880 1626 aa39.01■■■■□ 3.84
COL9A2-203ENST00000417105 SYNJ1O43426 1573 aa39■■■■□ 3.83
COL9A2-203ENST00000417105 PBRM1Q86U86 1689 aa39■■■■□ 3.83
COL9A2-203ENST00000417105 BIVM-ERCC5R4GMW8 1640 aa39■■■■□ 3.83
COL9A2-203ENST00000417105 ABCA5Q8WWZ7 1642 aa38.98■■■■□ 3.83
COL9A2-203ENST00000417105 SYNJ2O15056 1496 aa38.96■■■■□ 3.83
COL9A2-203ENST00000417105 CYB5RLQ6IPT4 315 aa38.87■■■■□ 3.81
COL9A2-203ENST00000417105 CLASP1Q7Z460 1538 aa38.86■■■■□ 3.81
COL9A2-203ENST00000417105 ARAP1Q96P48 1450 aa38.79■■■■□ 3.8
COL9A2-203ENST00000417105 ADAMTS12P58397 1594 aa38.66■■■■□ 3.78
COL9A2-203ENST00000417105 GRIN2AQ12879 1464 aa38.64■■■■□ 3.78
COL9A2-203ENST00000417105 ERICH3Q5RHP9 1530 aa38.59■■■■□ 3.77
COL9A2-203ENST00000417105 FHAD1B1AJZ9 1412 aa38.58■■■■□ 3.77
COL9A2-203ENST00000417105 NUP160Q12769 1436 aa38.49■■■■□ 3.75
COL9A2-203ENST00000417105 CEP170Q5SW79 1584 aa38.48■■■■□ 3.75
COL9A2-203ENST00000417105 ERCC6L2Q5T890 1561 aa38.33■■■■□ 3.73
COL9A2-203ENST00000417105 TRHP20396 242 aaPredicted RBP38.32■■■■□ 3.72
COL9A2-203ENST00000417105 KIF27Q86VH2 1401 aa38.29■■■■□ 3.72
COL9A2-203ENST00000417105 SHROOM2Q13796 1616 aa38.24■■■■□ 3.71
COL9A2-203ENST00000417105 IGF1RP08069 1367 aa38.24■■■■□ 3.71
COL9A2-203ENST00000417105 JPH4Q96JJ6 628 aa38.13■■■■□ 3.69
COL9A2-203ENST00000417105 PRG4Q92954 1404 aaPredicted RBP38.12■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms