RNA–Protein interactions for RNA: ENST00000317370.12

SLC2A4-201, Transcript of solute carrier family 2 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC2A4, Length 3,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC2A4-201ENST00000317370 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
SLC2A4-201ENST00000317370 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
SLC2A4-201ENST00000317370 ABCC9O60706 1549 aa21.61■■□□□ 1.05
SLC2A4-201ENST00000317370 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
SLC2A4-201ENST00000317370 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
SLC2A4-201ENST00000317370 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
SLC2A4-201ENST00000317370 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
SLC2A4-201ENST00000317370 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
SLC2A4-201ENST00000317370 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
SLC2A4-201ENST00000317370 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
SLC2A4-201ENST00000317370 NACADO15069 1562 aa19.88■□□□□ 0.77
SLC2A4-201ENST00000317370 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
SLC2A4-201ENST00000317370 CECR2Q9BXF3 1484 aa19.66■□□□□ 0.74
SLC2A4-201ENST00000317370 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
SLC2A4-201ENST00000317370 HRCP23327 699 aa19.6■□□□□ 0.73
SLC2A4-201ENST00000317370 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.73
SLC2A4-201ENST00000317370 PPARGC1BQ86YN6 1023 aaKnown RBP19.46■□□□□ 0.71
SLC2A4-201ENST00000317370 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
SLC2A4-201ENST00000317370 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
SLC2A4-201ENST00000317370 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
SLC2A4-201ENST00000317370 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
SLC2A4-201ENST00000317370 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.68
SLC2A4-201ENST00000317370 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.67
SLC2A4-201ENST00000317370 UNC13AQ9UPW8 1703 aa19.26■□□□□ 0.67
SLC2A4-201ENST00000317370 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
SLC2A4-201ENST00000317370 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
SLC2A4-201ENST00000317370 WIZO95785 1651 aa19.05■□□□□ 0.64
SLC2A4-201ENST00000317370 TRIM41Q8WV44 630 aa19.02■□□□□ 0.64
SLC2A4-201ENST00000317370 EIF4G1Q04637 1599 aaKnown RBP18.99■□□□□ 0.63
SLC2A4-201ENST00000317370 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
SLC2A4-201ENST00000317370 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
SLC2A4-201ENST00000317370 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
SLC2A4-201ENST00000317370 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
SLC2A4-201ENST00000317370 SMARCA4P51532 1647 aa18.88■□□□□ 0.61
SLC2A4-201ENST00000317370 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
SLC2A4-201ENST00000317370 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
SLC2A4-201ENST00000317370 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
SLC2A4-201ENST00000317370 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
SLC2A4-201ENST00000317370 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
SLC2A4-201ENST00000317370 NESP48681 1621 aa18.72■□□□□ 0.59
SLC2A4-201ENST00000317370 FBLN2P98095 1184 aa18.65■□□□□ 0.58
SLC2A4-201ENST00000317370 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
SLC2A4-201ENST00000317370 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
SLC2A4-201ENST00000317370 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
SLC2A4-201ENST00000317370 UBTFP17480 764 aaKnown RBP18.52■□□□□ 0.55
SLC2A4-201ENST00000317370 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
SLC2A4-201ENST00000317370 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
SLC2A4-201ENST00000317370 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
SLC2A4-201ENST00000317370 MYT1Q01538 1121 aa18.44■□□□□ 0.54
SLC2A4-201ENST00000317370 ATP1B4Q9UN42 357 aaPredicted RBP18.4■□□□□ 0.54
SLC2A4-201ENST00000317370 TRIM26Q12899 539 aaPredicted RBP18.39■□□□□ 0.53
SLC2A4-201ENST00000317370 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
SLC2A4-201ENST00000317370 TDRD9Q8NDG6 1382 aaKnown RBP18.31■□□□□ 0.52
SLC2A4-201ENST00000317370 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
SLC2A4-201ENST00000317370 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
SLC2A4-201ENST00000317370 FANCD2Q9BXW9 1451 aa18.28■□□□□ 0.52
SLC2A4-201ENST00000317370 ZEB1P37275 1124 aaPredicted RBP18.24■□□□□ 0.51
SLC2A4-201ENST00000317370 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
SLC2A4-201ENST00000317370 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
SLC2A4-201ENST00000317370 SOGA1O94964 1423 aa18.22■□□□□ 0.51
SLC2A4-201ENST00000317370 NEUROD1Q13562 356 aa18.22■□□□□ 0.51
SLC2A4-201ENST00000317370 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
SLC2A4-201ENST00000317370 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
SLC2A4-201ENST00000317370 RAD54L2Q9Y4B4 1467 aa18.17■□□□□ 0.5
SLC2A4-201ENST00000317370 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
SLC2A4-201ENST00000317370 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
SLC2A4-201ENST00000317370 CFTRP13569 1480 aa18.15■□□□□ 0.5
SLC2A4-201ENST00000317370 CEP164Q9UPV0 1460 aa18.15■□□□□ 0.5
SLC2A4-201ENST00000317370 PEG3Q9GZU2 1588 aa18.14■□□□□ 0.49
SLC2A4-201ENST00000317370 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
SLC2A4-201ENST00000317370 AQRO60306 1485 aaKnown RBP eCLIP18.06■□□□□ 0.48
SLC2A4-201ENST00000317370 CUX2O14529 1486 aa18.05■□□□□ 0.48
SLC2A4-201ENST00000317370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
SLC2A4-201ENST00000317370 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
SLC2A4-201ENST00000317370 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
SLC2A4-201ENST00000317370 CENPBP07199 599 aaPredicted RBP17.97■□□□□ 0.47
SLC2A4-201ENST00000317370 SYNJ1O43426 1573 aa17.96■□□□□ 0.47
SLC2A4-201ENST00000317370 CUX1P39880 1505 aa17.94■□□□□ 0.46
SLC2A4-201ENST00000317370 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
SLC2A4-201ENST00000317370 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
SLC2A4-201ENST00000317370 TOPBP1Q92547 1522 aa17.89■□□□□ 0.45
SLC2A4-201ENST00000317370 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
SLC2A4-201ENST00000317370 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
SLC2A4-201ENST00000317370 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
SLC2A4-201ENST00000317370 MRC2Q9UBG0 1479 aa17.84■□□□□ 0.45
SLC2A4-201ENST00000317370 KIF27Q86VH2 1401 aa17.83■□□□□ 0.45
SLC2A4-201ENST00000317370 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.45
SLC2A4-201ENST00000317370 APLP2Q06481 763 aa17.82■□□□□ 0.44
SLC2A4-201ENST00000317370 DIEXFQ68CQ4 756 aaKnown RBP17.82■□□□□ 0.44
SLC2A4-201ENST00000317370 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
SLC2A4-201ENST00000317370 ITGAEP38570 1179 aa17.77■□□□□ 0.44
SLC2A4-201ENST00000317370 CCER1Q8TC90 406 aaPredicted RBP17.76■□□□□ 0.43
SLC2A4-201ENST00000317370 IGF1RP08069 1367 aa17.73■□□□□ 0.43
SLC2A4-201ENST00000317370 RAPGEF2Q9Y4G8 1499 aa17.71■□□□□ 0.43
SLC2A4-201ENST00000317370 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
SLC2A4-201ENST00000317370 CYB5RLQ6IPT4 315 aa17.68■□□□□ 0.42
SLC2A4-201ENST00000317370 DNMBPQ6XZF7 1577 aa17.63■□□□□ 0.41
SLC2A4-201ENST00000317370 KCNH8Q96L42 1107 aa17.61■□□□□ 0.41
SLC2A4-201ENST00000317370 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
SLC2A4-201ENST00000317370 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms